cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK242847
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os08g0224300
(
IRGSP 1.0
)
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RAP - Chromosome No.
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8
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RAP - Location, Length
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7,567,563 -
7,572,905
( - );
5,343(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
7,567,563 -
7,568,062
( - );
500 (bp)
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Exon 2
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Location |
7,568,355 -
7,568,495
( - );
141 (bp)
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Exon 3
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Location |
7,568,940 -
7,569,075
( - );
136 (bp)
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Exon 4
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Location |
7,569,948 -
7,570,045
( - );
98 (bp)
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Exon 5
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Location |
7,570,536 -
7,570,650
( - );
115 (bp)
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Exon 6
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Location |
7,570,795 -
7,570,968
( - );
174 (bp)
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Exon 7
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Location |
7,571,205 -
7,571,290
( - );
86 (bp)
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Exon 8
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Location |
7,571,884 -
7,572,654
( - );
771 (bp)
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Exon 9
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Location |
7,572,785 -
7,572,905
( - );
121 (bp)
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Chromosome: 8
, position: 7,567,563
- 7,572,905
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 atgcttccgc caccgccacc gcccaacgac cagcagcaag cagctcagcc aaggggctcc
000061 ccatcgtatc gatccccatt cgcgccgtcc tcttcttctt cttcttcttc tcgattcata
000121 ggtgtggttt ccatttcttg ctgtggttgc tggttgaact agcttttgct ttgcttggat
000181 tgtgttttga ttgaggggtt tgttagtgtt agcaatctaa cccaagatat ctttgcaatt
000241 atatgctcca gttaatccgt caggcttttg ttgcttgctg ctgctgctgc ggtggcgggt
000301 ggggaggaag gatgctgatt gcggctgatt tcccgggaga ttcgacggtg tcccgatgcg
000361 cattccccgg tttgttctga gtgatgatgc ggtctccgtt tcgtgatctt tgattgatga
000421 gccgttccgc ggtaagctct gaaggcggca ttgcgctccg gctcttcgtg gactggagga
000481 tccggcgccg gagggtctgc gcatgcaaga tgttcgacac tggttcccaa aggggtaggg
000541 tgaagcagct ggtggctttt gccaagaaga ggaggcggcc caagaagcag ccgtcgcggc
000601 ggccatggtg gaaggcgtgg ttctcggact ggaacgacga ggaggagagc ttgtctggct
000661 ggagggagga tgaggagctg ctcgaggagg ttggcggcga ggaagggctg tcggacgacg
000721 agaagtttga gacgtggaag aggaaggccg aggctattgt cgagctgcgg gaggcgcggc
000781 aggatgccat gaacgcggaa gggcgctcgt gggaggattg gattggcggg ggcagtagca
000841 cagcggggga tggcggcggt gactggggtg gggatttgga tgtgtcagac ctgataacgg
000901 atgatcctac agagatagtg agggataaag gtttgattga aactttcaga gactctgtag
000961 atgaagatta caatgacatg ctgtttgaag accgggtttt tctgtatgct tcaacgaatt
001021 cggtgagctc tttacctatc ttgttttctg tcaccaaatg ttataaccca ctgtccagtg
001081 ataaccatga gatacttgta atgctttttg aatatgatga actacttcct ccgtttcata
001141 ttttaagtcg ttttgacttt tttcttcatc aaacttcttt aaatttgacc aaatttgtag
001201 aaaaaattag caacacctat cacaccaaat tagtttcatt aaatatagca ttgaatatat
001261 tttgatagta cgtttgtttt atgttggaaa tgttaccata tttttctata aacttggtca
001321 aactaaaaaa agtttgactg gtaaaaaagc caaaacgacg tataatatga aatagaggta
001381 gtactatata atattggagt gcataatata gcaacaaact ttaatcttta caccttacaa
001441 tattatcgaa cgctgagggt ccattttgat ggtaatgatt ttgcatctgg tggctggtgt
001501 attttgacca ttttgatgat taaaaattaa aaatgttaaa aagtgtagca gcattatatt
001561 gttatattaa gaccctagca aattggatct aacaaaagaa agtttgcact ttcaggccaa
001621 atttctagca ttattgattg tgattccatg ggtgttggat tttctggttc atgactatgt
001681 tctgatgcca tttttggaaa ggtaaatcct ctcacagtgt tccattttta ctttcttaac
001741 tttttcccct cacttcttaa tgtaagaaaa tgcattccat gtacacccaa tctgatgttt
001801 aggaatttat aaggtgaagt ttcaagcact gatgatattc tcagtttctc actctctgtg
001861 cttctgaaat tacatgcgat caataatcat ctatgctaaa tgcagaattg attacatgga
001921 acattacaca ataacaggta cgtccagaag gtaccacttg ctgctgagct gcttgatgta
001981 aggcgcagcc agaaactcct gatggtaaag gacataaata ctgagaaagc aagatatcgt
002041 tttgaagtag agattggtaa atctcctcca ctttctgatg atgagctctg gtcagagtta
002101 cgggaaaaag cgtgagaaac actctaacta ttatactttc ttgccttgtt gtaacttctg
002161 ttgatgcact agcattgtct gacatgagca atggaccttc tatcctgcaa tttcatatgt
002221 tcaatcttaa cagatctgct ctgctacttg atcaggatag agttgagaga tgaatggaga
002281 ttagaaaacc gaaaagcgtt tgcaaatatc tggtctgaca tggtttatgg aatttcccta
002341 ttccttctta tgtacttcaa ccagagtaaa gtatgtttta tcagataagc agctttgttt
002401 tttttttcca tctttgattg tgttccaata aatttttcag ctttctgagt gtgcatgtga
002461 gctaagtgat tggttataaa taaacacccc acaagttgac aaatttctgc actattaggc
002521 ctctctcaga gttatccgat ttctgctgtt aatacatagt acatgatgat tttgtgccaa
002581 aagaactgca gtgatgaact gaccagagta ttcccccatt ctatttgtac ctggttatac
002641 atcatacttt tctgacctag tgcagtagta agaccacctc agtttctgca atatgtttga
002701 ttgttagtat catttagtaa cacatacctg gagtccatga tttatgtaca atgaattcat
002761 caatctatct tatccatcat cgtagcctat ttttctctcc cattgaatgc ttagtgttat
002821 cctgcgtaca acttattctt attgcctgct aagctttcag gttgcgatgc tgaaattcac
002881 aggatataag ttactaaata atatttcaga cagtgggaaa gcattcctta taattctagt
002941 ttcagacatc cttctagggt gagttacaat tcatttttct tgagttcata tatacatgtg
003001 gttttagtgt gaacctagtt tgtaacaaag catacactaa acaattgtgc tatttctttt
003061 gctggataat ggatgtcagc aacctaacta aaggcaaata acatgagttc taacctacct
003121 ctctcatgtg ttacctgctt atctaaaaaa tcatacattt aaataagtaa ttcttgttaa
003181 aagaagattc gtccaaaatg ttcaaagaag ttaaagagga ggccagagct ccctccaggg
003241 gagagtgcct tttcttttca gaaactaata tcagggggat actcagcagc atgttttaga
003301 aagcaattca ttatatcttg tcatcatgat tcatgagcga ttttttaaat attctctcat
003361 aagtatggat aagtttgtaa aaatgcatgg aagaaatatt atagctattt tttttgtcag
003421 gaatgaggca gatggttctg tgtttcttct tcgttcgcac ttcaaatatg atcttaatat
003481 ttcttcattt ttctctctct tcaaagatgt ttgtagcatt cgtgtggcag aatcttattt
003541 atcatctagt tagaaactta gaatagtgaa cctaagtggt acagtatccc gttagaagtt
003601 aattcacaca aatgcatatg aactgctttg cgaataatgg aattcttcct gttcatgctt
003661 atgttataca tcatgacatc ttttctgttt caaacaaact atggatagtt tgtaattttg
003721 tttctgcttt ttttcttgtt ttcatgtaaa cgtaacacaa ggttaacatt gttttggttt
003781 gtctgtgatc ttgttgacta tattaacatc atttagctgc attttcacag gtaccattca
003841 gagtcaggtt ggcattcttt ggtagaagtc attctcgagc actacggcct tgaagccgat
003901 caagctgcaa tcaccttctt tgtttgtctg gttcctgttg ccttggatgt atttataaaa
003961 ttttgggtca gtccacttct tgccttcaca caatcaagct aatagggcta tgaacattta
004021 ttttattctt taaaaaacat ttatttcatt ttatcttttt ttaaaaaaga atataagtgt
004081 ttgttaaggc ctcataattt atgactagtt tcacccaaag ttgataacat tatagattca
004141 cgtttggcta ctcagcgcta acatttcaga taatattaac tgaaagtttt atagtctttc
004201 tacaaagtga tttgaacttt attgctgggc cgacagttat taggaagaca accttttgta
004261 gatacaattt catttcctga cactgctctt aaatcaattg ttcaccttgc atgtgctaga
004321 acccattgca ttttttaata actggaaata catgttctct tgataagatc aacaattcga
004381 cgtacttaat tttatttcct tattttccag gtatacaaat accttccaag attatcacct
004441 agtgtgggta acattttgga tgaaataaag cgtcattaga gactttccat caggaatttg
004501 atctgcttaa ttcattccat taagaatttg aaggaaagac catccttcca ggtatgtatt
004561 cggtgttata tacctttggc ttgtattgtg ttgttatcaa aggttcatta gcaacttttt
004621 gtgatggtgt ttgcgaggtg cttcttgatt ctttcttaaa ttgttgaaat attggctttc
004681 tttctttctt tctttctttc tttttgaacc agactgtgaa tgaaacagag ataaacatgt
004741 ctgattgaca aaagaactag ttacatattg ctgtgagcag ttaatcgttc attgagaaag
004801 caaatttgaa tctgagtttc tgaagaaagc tactctgctg cagggctcac tcggggctag
004861 tgtctgattg atgaaatgcc aacatagttg ccatggattg caatttcgga ggtcgcccta
004921 accagtgctt accctacaaa aggcatacat aacattctgt agtatatata ctctccacat
004981 aaaaaaaatg tgctgattac acatatcatc caggaatatt caggttgatg cggtattcac
005041 cgataatgag cgattttgtc ccaggatgct cacatatcga accttctgtg ttttcatctt
005101 tttgttatgt gaaattcgaa acaactatgt atatgtatac aaacagcaga ggctgcagta
005161 ggaatttgcc tttccccctt ttttctccat tgtagttcct tgtggcattt gtaatgttat
005221 caaggaattt aggccagtct aagaaaataa tttaggtcca atttggtgtg cgggatgaga
005281 ctattttctt gttcctgcag gaaattattc aattcatgca tgtgaggaaa tacctatgct
005341 tca
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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