cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK241395
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os08g0508800
(
IRGSP 1.0
)
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RAP - Chromosome No.
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8
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RAP - Location, Length
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25,304,465 -
25,312,083
( - );
7,619(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
25,304,465 -
25,306,143
( - );
1,679 (bp)
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Exon 2
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Location |
25,306,252 -
25,306,337
( - );
86 (bp)
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Exon 3
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Location |
25,306,434 -
25,306,766
( - );
333 (bp)
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Exon 4
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Location |
25,306,998 -
25,307,238
( - );
241 (bp)
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Exon 5
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Location |
25,310,577 -
25,310,872
( - );
296 (bp)
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Exon 6
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Location |
25,311,567 -
25,312,083
( - );
517 (bp)
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Chromosome: 8
, position: 25,304,465
- 25,312,083
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 aattagctcg atctgcaagc aatccaaagc caacccaagc caagctcacg agtgcagagc
000061 tagacgacgt gtagatacgt agtctcctcc gatatctctc tctctctcga tcgacgcctc
000121 tgcatatata atacccatac catgttgcgt cctcagctca atccatctag ccacacgacg
000181 acgacgagca gcagcagcag cacgcagctg ttcgcatcct cgtcgtgcat cgctagcctt
000241 cgccggccgt cgtcgtcgtc gtcgtcggtg gtcgccgccg cacgccggac gcgggggcaa
000301 ggtagcagtc gggttgttgt tgtgtgcgcg tcgtcgtcgg cgacggcgag caggggagat
000361 agttcttcgg acatggcggc ggcggcggcg gtgcgggtga aggcggtggc gacgatcaag
000421 gtcaccgtcg gcgagttgat caacaggtcg atcgacatca gggatctcat cggcaggtcg
000481 ctctccctcg agctcgtcag ctccgagctt gacgcgagta agctaagcta attaattgtt
000541 ttttctgtta attaatgatt agatggattg atgatgcata ttcctgcatg catgcaagca
000601 tcgtatgcat gcactgataa tactctccct ccgtcccata atataagaga tttttaaagc
000661 gatatgacac accctaaaat aatgaatctg aacaagcctc atgggatgga gggagtactt
000721 gatttgcata gtttttatgc atactttggt tcttagatct catgacctaa gtagcggaaa
000781 actattctaa actctacagg gacattctac atgctatcta aatggttatg aaaaatttta
000841 ataagatata ttaatatgtg ataaatcact ctataaacat gtgaggtcaa atttaacttc
000901 tacaagttct aaaaagatag ttgtgaatat atgttgacta gtcatagttt aatttatttt
000961 tattgcaaca tttagaagtt aaattttaac ttagtatatt tgtggagtta tctatcatat
001021 attaatccat cttggttaat tttttcattt ttcaaataac catttgaata acatgcaaat
001081 aacaagagga tgtcccatca agagattaca atccactctt ctgaatagct atcaaataat
001141 agtgatccac tatcctaaat gctctctatt gagccttgcg gattaattaa tcaccacaat
001201 taattacgca gagaccggga aggagaaagc aactgtgcgg agctacgcgc acaatgtgga
001261 cgacgacgat catagcgtcg tcacctacga ggccgacttc gacgtgccga gtggattcgg
001321 ccccatcggc gccatcatcg tcaccaacga actccggcag gagatgttcc tcgaggacat
001381 caacctcacc gccagcgatg gcgccggcaa ctccactgtc ctccccatcc gctgcaactc
001441 ctgggtccaa cccaagtccg tcggcgatga gggcacgcct agcaaacgca tcttcttcgc
001501 caacaaggta cttcctccgt tttatattat aagtaatttt aacttgttct agtcaaattt
001561 gtttaagttt ggttaagttt ataaaaaaaa atagtagctt tttaacgcaa taaacttata
001621 atcaaaatat atttaatatt agatttaatg aaactaattt attattttaa atgtttttaa
001681 tttgttccat aaacctggtc aaactcaaca aagtgtaact aagaaaaaaa aaagttaaaa
001741 ctacttacaa tatgaaacgg agggaatact tcattaatta attaaaacac actattaaat
001801 tattaataca tctaaattta tattaaaaaa ggtgaaatat catctcaaat tttctcacaa
001861 aatctgaatt ggagagtaat atatatatat atatatatat atatgtatat atatatatat
001921 atatatatat gtatgtatgt atatatatgt atgtatgtgt atatatatat atatatatat
001981 atatatatat atatatatat ataacaaaat ctgaattgga gagtaatata tatatatata
002041 tatatatata tatatatatg tatatatata tatatatatg tatgtatgta tatatatgta
002101 tgtatgtgta tatatatata tatatatata tatatatata tatatatata tatatatata
002161 tatataggat acccatatgg gactctatgg tgcccagatt ccaatgtata aaacacataa
002221 attctctcaa atttttaaaa atttacaaat tgtaagtaga tatctagcta tatgaatttg
002281 attcatacaa atacctaaca acaaaacaac tcaaactcaa ctttatttca caattcatta
002341 ttacatacct aacgaattat atgtttggat gttatataac tataaccaaa atctaacaaa
002401 aaaaaaattc aaactcagtt caaacttgtt tgaacttgtt catatctaaa catttaaaaa
002461 aaattcatac tcattcaaat tgggtatata ctcaatttga atcttggagc ccatactcca
002521 tgtagcacca gttaatttac ctatatatat atatatatat atatatatat atatatatat
002581 atatatatat atatatatat atatatatct actactactt aaaaaataag aggtgcttcc
002641 atcgtccgtc aaaaaaaccg ggtgaaaaaa aaccgggcga aaaaaaccag tttgtccgat
002701 ccaaaaaaaa ccggtaaaga aatttccgtt tttaattata aaaaaattac ccacaaaaat
002761 agtttctgtc cgattccaaa taaaaaaaat tccgagcgac aaaagagttt ccatcttcct
002821 acaaaaggaa agaatagtgc gaaaaaaaaa gtttctatcc gaagggaaac acgcgtgaat
002881 aaatacctaa ttaaaaataa atatctatct ctaaaaaacc ttctgtcgta aaaaaaggaa
002941 aaaaaggacc gactcccgta gagaaaaaaa aagtccgact cgtgaaaaag aggttttctc
003001 gtccgtaata aaaaaaaaga aaaaaaacat ctaactcaaa ctccgtaaaa agaaaaggag
003061 gaaaaaacga cccgaccaaa cttaaagtcg ccccttgtta tccgtatata tctctttaac
003121 tctaatctaa tctatcaatc taatctaaca aagagaagtt tccatcatcc gttaaaaagg
003181 aaaaaaatgc gcaagaaaaa aataatttcc aaaaaaatgc gcgggaaaaa tacggtttcc
003241 ttcgtctgaa aaaaacaaaa aaaatgctat taaaaactat cagaaagaaa tacaccattt
003301 ctaaaaaaat ggtttcaaaa aaccacacaa gaaaaaaaaa ctgtttataa aaaaaagccg
003361 ctctgaaaaa actaaccgat gaaacactgt ttataaaata acagatccaa aaaaaacaaa
003421 cggactcaac acgcgaaaaa aaccgatgtt tcaaaataag gttcgagaaa accgtccgac
003481 ttaatgcgag aaaaaaacca tcatttcgaa aaaaaaatta gaggaaacca tccaactcaa
003541 tgcgagaaaa aaaccgccgt ttataaaaag aaccgctccg agaaaccgtc cgactcaaag
003601 cgagataaaa ttgatgggcg cttgggtcgg ataagatcca tcgatatttt tccatctcct
003661 acacatcatt tcctacacat catttgtttc ctcatctaat ccctgcactt tttgtatgca
003721 attatcatta tcagactttt tttaataaca tattatataa aaatagtatt aaaaataaac
003781 atatttttaa ttgttattta gagaagagtg cacggtgact attttgtgta gacttgatcc
003841 tgagtgtagg atttgattaa cctattattg gttgcaagaa taatattgaa agaatatttt
003901 tttattatat gtatattgtt atatgaataa tccaattatt ttagttaaag caagcattgg
003961 taaaaagatt gccatcatcg agtttgggtc attacataaa gatgctctaa ttttctaatt
004021 gtgttagcta caacgatcca tagaaacatt atcattgata tgggtacgct tgaaaaatgt
004081 ctattgtcat tggattattt tttttacccg ttgcaacgca cggacatttt tgctagtata
004141 tatatatata tatatatata tatatatata tatatatata ttcattagtt ggagttagcg
004201 tggatgacga gcgaccgcga ttgtgcgctt gctcttagtg cacttatata gtccctcggt
004261 tgcttaaatt cccccgaaat tttcacaaat tcacacgcag cataaaacgt caattgtatt
004321 gggcttacaa atcaaaaatt gccaccgagt tgggctggcc catgggccgt cccgtaaaca
004381 ggtgggccca acctagcaaa atcgttgccg ggaccaccta tacatttgtc gacaaatttt
004441 ctactaaaaa tttaacagat gtaattatag tacaatcata gtgtaattac actgtaactt
004501 gtatgtaatt acactgtaac ttgcatgtaa ctacagtgta acttgtatat aagtttcacg
004561 taattttgaa tcgttagatc tattacaaga tttgttctgg tgaggaagaa aaaaatcaca
004621 gcacacacat atgtgaaagg atttattccc aggacctata ttttactgaa taacatgttg
004681 ccgagaaatt cttgaaagtt acatacaagg tacattatag ttacagtgta attacatgta
004741 agttacagtg taattacact acgattgtac tgtaattata tctgacaaat attaggggga
004801 gaaatttgat gacaaatatc tagcaaaatc gttgccattt tgcagactta cttgccggga
004861 cagacgccgg cggggctccg gagctaccgg aagaatgacc tccagcagaa gcgcggtgac
004921 ggcactggcg agagggaggc cgacgaccgt gtctacgact acgacgttta caacgacctc
004981 ggtaacccgg acagcaacgg cgatctcgcc cgccccgtcc ttggcggcaa caagcagttc
005041 ccctaccctc gccgctgccg caccggccgc cccccctcca aaaaaggttc gtgagagaaa
005101 ttttactgtt cttgaaaaag tatctcaagg tacctaaatt tcacagtaaa attttcgata
005161 actcagggta cttagtaact acatatatca aattttacac taatgtggta cttctggtac
005221 catcttctca agaatggtaa aattacccgt ataacggatt acgtatagtc gttgtcgtct
005281 ccggtggcga ctgatcgagt tttggacaat gttgcagacc ctaagtcgga gacgaggaag
005341 ggcaacgtgt acgtgccgag ggacgaggag ttctcaccgg agaaggagga ctacttcctc
005401 cgcaagacgg tggggtcggt gctccaggcc gccgtgccgg cggcgcagtc gctgctcctc
005461 gacaagctga aatggaacct tccgttcccg tccttcttcg tcatcgacaa gctgttcgag
005521 gacggcgtcg agcttcccgg cgtcgacaag ctcaacttcc tcgagagcgt cgtgccccgc
005581 ctgctcgaac acctccgcga cacccccgcc gagaagatcc tccgcttcga aactccggcc
005641 aacatccaaa gtaggcatcg aattaaaccg aacagcttca cctcgatcgc cattgattct
005701 gcagcattcc aagtgtctaa tggtgtttgc tgtgtcttaa ctgcagagga caagttcgca
005761 tggctcagag acgaggagtt cgcgagggaa acgctcgctg gcatcaaccc gtacgccatc
005821 gagctcgtca gggtgagtct tcatgtcaag aattcagata tttcgattcg gattttagag
005881 aaagtttgtc aatgttgtgc aggttttgat tttggtttga tttttgctct gtgagtgcag
005941 gaatttccgc tgaagagcaa gctcgacccg gcggtgtacg gtccggcgga gtcggcgatc
006001 accgccgatt tgctggagga gcagatgagg cgcgtgatga cggtggagga ggcgatcagc
006061 cagaagaggc tgttcatgct cgacttccat gacctcttct tgccgtacgt gcacaagatc
006121 cggtcgctgg atcacaccac catgtacggc tcgcgcaccg tcttcttcct caccgacgac
006181 ggcacgctgc agctgctcgc catcgagctc acccggccgg cctcgccgtc gcagccgcag
006241 tggcggcagg tgttcacgcc gtccacggac gccaccatgt cgtggctgtg gcggatggcc
006301 aaggcccacg tccgcgccca cgacgccggc caccacgagc tcatcaccca ctggctgcgc
006361 acgcactgcg cggtggagcc atacatcatc gcggcgaacc ggcagctcag cgagatgcac
006421 cccatctacc agctgctgcg cccgcacttc cgctacacga tgcggatcaa cgcgcgcgcc
006481 cgctcggcgc tgatcagcgc cggcggcatc atcgagcgat ccttctcgcc gcagaagtac
006541 tccatggagc tcagctccgt cgcctacgac aagctctggc gcttcgacac ggaggcgctc
006601 cccgccgacc tcgtccgccg cggcatggcc gaggaggacc ccacggcgga gcacggcctc
006661 aagctcgcca tcgaggacta cccgttcgcc aacgacggcc tcctcatctg ggacgccatc
006721 aagacctggg tccaggcgta cgtcgcgcgg ttctaccccg acgccgacag cgtcgccggc
006781 gacgaggagc tccaggcgtt ctggaccgag gtgcgcacca aggggcacgg cgacaagaag
006841 gacgccccgt ggtggccgaa gttggactcg ccggagagcc tcgcccacac gctgaccacc
006901 atcgtctggg tggcggcggc gcaccacgcc gccgtcaact tcgggcagta cgacttcggc
006961 ggctacttcc ccaaccggcc gtccatcgcg cgcacggtca tgccggtgga ggagcccgtg
007021 gacggcgccg ccatggagag gttcctggac aacccggacc aggcgctccg cgagtgcttc
007081 ccgtcacagg tgcaggcgac ggtggtgatg gcggtgctcg acgtgctgtc cagccactcc
007141 accgacgagg agtacctcgg cggcgagcag acgaggccgt ggaacagcga cgcggcggtg
007201 caggcggcgt acgacgggtt cgcagcccgg ctcaaggaga tcgagggcgt catcgatggc
007261 cggaacaagg atagaaagct caagaacagg tgcggcgccg gcatcctgcc gtaccagctg
007321 atgaagccct tctccgactc cggcgtcacc ggcatgggca tccccaacag cacatccatc
007381 tgatgagaca aaacgctcca aaactacttg caaattgatc attcatcatc tactgtttta
007441 accaatatgt cactcccaaa tctttattga tttttatcat gtttgaaaag ataatcgaga
007501 ggtatcatac catttttata gtctaaaatt tagatattat gtatctcaag gtatcacaat
007561 gtttaatgta aataaatttt gttacctcaa gatattttct tagcgactgt aattttttt
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
