cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
|
General information
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RAP - Accession No.
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AK111893
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os08g0157600
(
IRGSP 1.0
)
|
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RAP - Chromosome No.
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8
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RAP - Location, Length
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3,359,868 -
3,372,387
( + )
;
12,520(bp)
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Exon (Data source : RAP-DB)
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|
Exon 1
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Location |
3,359,868 -
3,360,209
( + )
;
342 (bp)
|
|
Exon 2
|
Location |
3,360,299 -
3,360,376
( + )
;
78 (bp)
|
|
Exon 3
|
Location |
3,360,647 -
3,360,702
( + )
;
56 (bp)
|
|
Exon 4
|
Location |
3,364,755 -
3,364,783
( + )
;
29 (bp)
|
|
Exon 5
|
Location |
3,364,891 -
3,365,002
( + )
;
112 (bp)
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Exon 6
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Location |
3,365,210 -
3,365,238
( + )
;
29 (bp)
|
|
Exon 7
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Location |
3,365,400 -
3,365,600
( + )
;
201 (bp)
|
|
Exon 8
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Location |
3,365,673 -
3,365,784
( + )
;
112 (bp)
|
|
Exon 9
|
Location |
3,365,968 -
3,366,029
( + )
;
62 (bp)
|
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Exon 10
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Location |
3,369,976 -
3,370,194
( + )
;
219 (bp)
|
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Exon 11
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Location |
3,370,302 -
3,371,681
( + )
;
1,380 (bp)
|
|
Exon 12
|
Location |
3,371,772 -
3,372,387
( + )
;
616 (bp)
|
Chromosome: 8
, position: 3,359,868
- 3,372,387
bp
|
|
|
Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
|
000001 gagagcgacc cccacctctc tctcctctct cctcttcccc ctcgcggccg cgcagcagca
000061 gcagcagcgg aagcatccag gtagcagcag ccgcgagcga gcagcgaacc gagcccccca
000121 catccatcca tctcgcttgg tttggtttgg tttgcagtgt tagtggcagc gagatccctt
000181 tgctgttgtt gtagcttcgg gaggaggagg aggaggagtt gtgacggcgg cggaggagag
000241 agaaggagga ggggcttgtg gtggtggtgg tggtggtgat cgatgcagct gctgagccgg
000301 cggcggcgag gccggtgacg cccgccgtgg cggtcgcctg aggtagggtg gttccggttt
000361 cttcggctcg ccgttggttc gtcatctggt tggtttgatt cgcttcgctt gtgggtgggg
000421 gcgcaacgca ggccgccgtg tggagggctg gggcttgcag gcggagcgag gcggcgagct
000481 tggttgggat tgctttgctt gctctcgagg taatctgaat ttttctaccg gtttttacga
000541 gcaatatcgc gatgctctgc tctagttagg attattattt tgttctatac tgtttgtttt
000601 ttcttcccgt ttgattttgg agcggtgtag tttttaccac tggaattgct gttctgcttt
000661 gtaattttgt actatggaat ttatcgctgt tctgctcgga atggatcacg gatatgcagt
000721 agccgatgct atttggggat aactgatttc tgctgctttt gtcgcggtgt tctctgcagg
000781 gcgacggcgc ggttgggcat tcgttcggtg gtggtggtgc tcggttgctt cgctgaggcg
000841 agttctctct ttcttctccg tgtgcgagtt gagagagcgg tgtgctcaat tttttagcac
000901 tcgtgcgaaa ctattgcttt gttgcgttta gttcgtgggc actcgatgcg aatgagctct
000961 cttctcgctg atttcgatct ccgtactggt ttccatgtgg ctcggattaa tcagatttgt
001021 ggggacctcc tcagggtagt ggagtttttt ggtagagtag attggttgca ggtctaatac
001081 taactttctt tcttctcttg ttctggtggt tatgtgtggc gatttttttt tttttggcct
001141 cagtttcgat gattatggga gtgactaagg ttgcatcttc tccgcttagc atggctgtta
001201 aggaaacttt ttcctgggat tggtttgttc aagcagagct agtatatcta gttgtgtttc
001261 ttgtggttac ttgtttgggt ttgctgttct agttgattgc tgtaactgta agtacctttt
001321 ttggtctggg ggcatatgct ctttccgtgc tgttgtcaga agtcagtacg aagtggtgca
001381 taaaaggctt caaaactctt atgtactttt ttgttgtggt tatagaaaga caatatgact
001441 attgttaact tggtaccctg atttgcaggt agaaaattgt tggtacacga gttaattcag
001501 gtgcaggctt tttgtgactt cttgggtttc agctactctt tagtaaaaat cgcggaatct
001561 aatgtggtac catgaatgct ctaaatttgt ttttcagagg aaaaaagagt gtaatttgtg
001621 ttcctcaatt tgctatgcag ggagagagca acttgatata gtcgtttaag gaggtgagtt
001681 aaagatagtt taactcagtt gctgctcccc tcgatctttg attattttgt tgttattgac
001741 ttttcaaggt ttatgggatg tgaatttgat agttattttt ttataacttc atattaacat
001801 ctactaataa aaccattcct ccgttccctt ttacttgaca cagttgacca gtgtgatttt
001861 atctttgact ggtaaaaact tctaaattat gacgttttcg tgaacacaag tagtatagtt
001921 atatttagca tgcaagatac tttgataata tggcatcttt ttaaatattt gtaatttttt
001981 tcaaaaagga cgagcggtca gatttgtata tgaatagtat ccggtgtcaa gtaaaggaac
002041 agatggagta tagtattatg cataacgaat tccataaaac ggcatttatg gtcatcatga
002101 gtccatgttt acgcaaacta ggaaggcact ggttcctatg catcctgctc taccctgtgg
002161 cctccattgc aattatttgg tcatcacagc tgaagttgct gtcttcagct gccagcagaa
002221 tttcatttca aatactgcta taaattgccg caacaatcct acaagccttg tagcttgata
002281 ttaatcaatg gaattctgag ggaaatcttt tgccaatgta aagcttaaag atattaatga
002341 atggttgcgt ttgtcttcta ggagtttcat ttgaagctag tgcaaaatac aggcatatgg
002401 tgtcttctag gaatggttgc atttaccata gtggaaattt ttaagtgctt caagcactga
002461 tgtttcatga gcaatataca tcttattttt gatttgtact ttttttctag agtcaagttt
002521 ataaaaaatt gaaatagttc tatgagaata caaactcctg taagctatct caacatgtta
002581 tgcattggct tgtactgtac caataaccta gcctcctagg tctccagacc tgtatctgaa
002641 ccaatccaca acaaacagtt ttacttatga tccattgata ttgtgctact caatgcaatg
002701 gtagatcttg gttaccttgt tcgtgcatat ttcttgtgga ccccagtttt ggagttggta
002761 ttttttttag ataatgttaa atgttttgga ctgtttttat tttttccaat aatgaaagta
002821 acttccgaag tgttcaaact agttacaata aaacactgca tatttcattt ccatttcagt
002881 attgattatt gaaccatgat tttttagtcg aaaattagtt aagggccaaa ggcatgtatt
002941 ataggaagtg gcactgttca gataaaccat tacaaattcc tttcccactg ctgccttgca
003001 atccatcttt tttttttcga ggaaccgacg gcaggagttt ctcctgccgg aatatataga
003061 agaagaggaa ttggcccagt taataaggga aaccgggccc aaaaaccgaa ccttgcaatc
003121 catctttatt gtggccttac aatttgttgt ccatttcatt gatgaatttc ttctgtgcca
003181 agaccaacct agaagcaaag tggcaatctt gtaccattgt attctttttc atcgtggaac
003241 tcacccatat tacagtgaga tggtgcagtt tatttttcca ctacccaaaa aaaaaactgc
003301 ttcacccatg cacaactagg aaaggtacca tacatatcca gagtgatcta agggttagtg
003361 ctaacaagac tttgagaata ttggaattaa taacgagatg cactattgca aatgctgaac
003421 gcccacctag ttttgacaaa atacacctca cagtccacat gctatgttgg caaaggtgga
003481 gagttgaagt ttcttggatg gtgatagtga tacactggtg tttgtagctg ctacatcaaa
003541 ctgaatgaaa ctgaatttga agtaacaatt caaataggaa tgtgattcct tatgactctt
003601 cagctgtata agataattca ttgttgaaac cctattaagt gttattgcct tttagcgacc
003661 tcacctcact tcaatttgtt tgattgtgaa cttcaaatat ttgcctaatc tagaataatc
003721 ttttcacttc atcctgagta gtgaattcca actattttag gtccttagct taaagtggaa
003781 ctgttgttgg tggggaatgc gttgacatga tgttaaagtt acacagaaat tcaaatggtt
003841 gagatattta gtttcgcgcc actagagatt tggtcatttt gactttagca tgttaggttg
003901 ttgccaccac taagaaagtg gatgtgagaa tgccattatt gcttcacata tatattttaa
003961 aaatctaatt caatcactag gtcttactcc cagtaacaac aattacgttg agactatcac
004021 tgtttgcaca agcatatgga tgttggcctt gcttgcaact aatacagctt acaaccaagc
004081 tcatggccaa ctgaacacga tttctcgcca gtattgaatc ttatatcagc atatgcaaaa
004141 tttggaacca gggcgtacca ttgaacctca taacagtaga attttgtcct gagtgattgt
004201 gctcgctacg atttgactgg gtatagattg agaatcacat actcaatatt taagttagaa
004261 aaaaaagggc tgtacagcca gagaggccaa atatgtagtc agccaataaa agacggtcat
004321 gcaccagaat ggtgccccac acatgagtgt gttagctact ccctctattc cataatataa
004381 ggcacaacta cttttttgag atgtttcata atataagaca tgcatgaatg catgccatta
004441 actagcactt ctttcccact aaattattat gttttttgag ttttccatcc tcaatatctt
004501 taattctatt gggtgcatgc attatattta ttagggtgat tcaaactatg aggtgataat
004561 aattatttct tggtctttgg gttgaaggtg gttgagcctt atattttgga atagagggag
004621 tacatcttag gagtcggaga caattttaaa attagactta attaatccac gcattattaa
004681 actgccaaac ccttggagtt aaccccaaaa ttcagatatc accttgatgt tctttccatg
004741 aatctgttgg ctgattttgg tcagcagctt tgttaaattt tccatttctt ttgtaaagca
004801 atcaatttgg cttttctggt gatgaatgtg gttagaagct gtaaactaat ataactatgt
004861 actgattgtg tattttgttg ttctggcagg atcaaggaag tgtttggcct tcgtaggtga
004921 gcctgattac tgtttgcatt gctgcttcat atatttttca tacttctaat tggttttatg
004981 tttctaatta attcttcttt ttttaatggt tgcataattt gagaactgcg agttttaatc
005041 tgattctaga gttgaagata acgaaaggag caagggtgaa ctctgctgac ttggtttttg
005101 tgtgcacaga ccaactgcag ctgaggattt agtaggtgag tggagtggtg ctgtactgcg
005161 ctgtccctgg atttttgtct cgagtaattg ttgtagttgt ggaacccttt agttttatca
005221 aattaagtga tgccttcttt tggggaaata aatgtttttt tcttggtgga gttcagtttg
005281 accatttgga gatgcttatg aatttaaaat gatgtggccc cttattgcat tttttttttc
005341 agattgactg caattggatc aattcaagta ggtgagtgga attgatcctc ttgaagattt
005401 tgacccaagt ccaattcaca agtagaattg tgaattcttt aggttctacc ttgggtttgt
005461 aacactaatt tggctgctct tttgtggttg gccgcacaaa tttgaaatac tgggagtgtt
005521 ggcgtgatat agaggtctag gaggaggtat gaggtactac ttgcgtcagg tccagcgttt
005581 ggttggagat atggaaggag gagtgctttt gtttgtggaa gacctcaact ctaactgaca
005641 aagcgaccaa ttgccaacac ttctgttata tttcttcttt ttcttgaatt gggaatggag
005701 attaattcct ctggtgagga agcggtggta aaggtgagtt gttctttgat gtgcatgttg
005761 attcgtgtta aaagggagca gcattttatt aggggttatt tgtaggtgag gaagccatac
005821 acaatcacaa agcagaggga gcgttggact gaggcagagc acaacaggtt ccttgaagcc
005881 ttgaaactgt atgggagagc ctggcagcgc atagaaggtg aattctccac atatatatgt
005941 catatcacaa atagttctat gctattactt tctgaattta ctttttgtac tcactgtgat
006001 tattagctgg ttaataaata cggctttaat tgagttattg atatggatct tgcatctttt
006061 ttttttcgtt ttcttgtttg ccgtctgatt tattctatag agcatgttgg gacaaagaca
006121 gctgtgcaga tcagaagtca tgctcaaaag ttcttcacca aggttcttcc tctatcttat
006181 tggccagtgc tccttttttt ggtttagcgc tatctcctta gctttctggt ttccttgtct
006241 ttacctttgg gataaaaacg gctggctttt gtgcttactt tcttattatt ttttcttact
006301 ttctgcagta ttatttcttt ctttccttct tttattttac atatgagtac agcaattatg
006361 tacatagagt ctgaactgtg tgtgatcagt tcctttcgat tattatgaga aatacactta
006421 tggcttttgt gctctgttag ttggatgaaa cgttaactaa acagtgctga gatggaaaag
006481 aagcactagg aagtgtttgt ctcgtagtaa aaaaaaaata atgttgcaaa attgatgcta
006541 ttaaacattc tgtttgcatg ttcctttatt tacatatcca tcctatcact gagattttga
006601 gcatgcacag atgcacttat gacaaaaaaa aaagcatttt ggtactgtta tatttacata
006661 ctaagtcaag tcaaattgta tatctggact atcatcaaga ttagtaataa agatttagtt
006721 aaacatgttc cagtgcctac gtggtgttca taactaataa ggattcttaa aaaaaaaaag
006781 aactagggca gccatttgag acaatttatt aaaataagaa aaatgtaaaa tgatttgcaa
006841 gttgaccaag gtatcacctt ccattagaaa tagccactca atcgcgcatt tgcgcgactt
006901 tgactgacag catataatat gtaggagtag ttataacagt cacgagtgga ttaagtttct
006961 tttatttata cattaggctt attttttaat gaaattctaa tttacgcggt agaattgtat
007021 ctttattttt gaaaagggtt gtctattatt aatgattttt ttaatcaagg tgtaatattg
007081 gaattcacag ttatttgttc ggcaaacatt gtaataattg tctgtagatt cactaaagta
007141 aaggtcggaa taatttttgc catgctggct ttttctttag aaaaaaaaag aagaaaactg
007201 ttgtccggtt tcctccaatt ttttttctac gtgggctgcc tgcaggttct ggaggtttct
007261 ctttggaact ctccttgttt gattagggct aatccaacgg ttgttgttgc ttatttcttt
007321 gcattggacg gtcctacatt tctttcttat gtggctcaac cagattgtgt gaaagtagtt
007381 ctttcactac tttatattgt gtgaaaggtc ggaaaacatc aaaaataata ctgtacacct
007441 attgtttatc agtcaaaaca gaaggaccta gtccattccc ttcttttaaa aaatttactc
007501 ccaatctaag tcttgttttt tttcctgttg cgcaatctac ccaaactgtg ccttttaggg
007561 gctttacact gccacctgat ggaggtcacg ttgccatcac tgtgcaacag ccactggact
007621 gttgcattgt tgattgcatc atcatcctct caaaggtctc attgcaagat ctatgaatgg
007681 ggaggaacac aaggttagta atttaagaaa catgatggct ttctggtttc tcaactctat
007741 atccagccaa catccatgag catctgaccg tccattgttg tggtgggttg gatttttggt
007801 tgttgattaa agaggtgaat aggtctgccc taatctccat aaaatatgta atacagctaa
007861 taggttttcg tcgctgcaag tacttgccag taactgttct ccatgtctag gctcataaaa
007921 aatatagagt gacaagtaac aacgtttaac ctgaccaata cttatactgc ttaaacacct
007981 tctgttttct aacaagtatg cagtaaatgt aatcagtgct acaataactt cttgaacatt
008041 aaccatgcct agaacttggg accatacgct cataacattg gtttgagaag ggtagtggac
008101 tgggaggata tactctagtc acgtatttcc tagtaatccc ttggttttgc caaaaaaaag
008161 gcaaccaagg caaattacca ctgttcattg aaccctgata gtcaatagtt cgaaaagtgg
008221 taactaataa ctgtgaaatg tccattgtgg ttgatgtcaa ttaaattagt ctttactttg
008281 ataagatgtc caagagcttt ttggagcccc gaagggttat gagtgatggc cattccaggc
008341 ttcagatgca cagtcgcttt tcttttgcaa agacatgcaa caatgtttgg ttctacatca
008401 gcactatacc agtaattgca gtagtatagt tttggcttgt cgttactggt ttctgggctg
008461 aagtccaaca tgactaggct ccatttgtgg tcttatctag tgactaggct ccatttggtt
008521 cttgtcataa ttatccacag agatctggtt cattgatcac tttttctact gtatcagcga
008581 aaagtttgat gatattaccg cctatacaaa tgttatagca tgctgctaat catacccacc
008641 aatgcatact ctcccctgtt tggtcaatga tgattgatgc catggttgat gttcaaacta
008701 aacctcggca ggtcattctg agatcagaag gataatatag gcataaaact aaatctatga
008761 caacctgtaa tgtggaaatg gcctttttct tttatgcagg tgaaaaaaaa taaatgcgta
008821 ctaaattaat aataacccaa ggggagagac atcccaaagg cattgcatat aaggttgagc
008881 aaaggcccca aagccagctc ataaccgtat gggtacttta ggggaacata tagcgagggg
008941 tctttttttt tgtgagaact aggaagcctc atgactggag gacttaccag ttaccaccgt
009001 gctacaagca cgttctctct actaaattta taatagcaaa gtacttggct tcaatgtgac
009061 tttttaggtc caggaaaaat gctttcaaat ttcttatcaa cttatcatca caatagctag
009121 acgatgattt tgatcaataa aagagcaggg gaatgtctag ttgactgaaa gtagaagagg
009181 aacaattttc tttctgcaaa tttggcttca aaataatctg ttgaaatatt catcattaca
009241 tgttttcttt tggacaaagg aagtgtaact tccagcctct gcaccaacta aggatgcaaa
009301 caaccatatt tgtggatacc aggatttgaa ccctggtggc tggagtcatt acatgttttc
009361 tatattccaa cttccatgtc aaaccatgtt cctgaagtat aatgctcatt aattatctaa
009421 tatggcagca aggcagacat aatccggtaa gtaaagggta gggctgaccg ccctctggtc
009481 aagcaggctc tccctgcata gcaggaggct ctgctcggtg aaatacaaaa tccttctctg
009541 atattattgc ttatttttcc ttaatacaca tactagtcca cctttatagc acaagtgctg
009601 agatatgtac ttggaagtac taaataaact aggaagctct agctagaaag taccggttcc
009661 cgaaccgatg gcttcatgaa actttttgcc aaaggttttt agtaaccttc tacatgacac
009721 tccctctact ccacaatatt tgtccaagac taccatctgc atagaccaag gaggtgcaag
009781 atataagaaa tagttaatga taatggacta tatataccat ctgcataact tttatacctc
009841 ttttaagcat tatataaagt ttagtagaga gttgggacat cgcaataagt ccaaactcct
009901 aattttctcg acaaacagac attgtcaaag gggacagccc cgagaaaatg aacaaatctt
009961 gtggagcaga cggagtagca ttatgtaaaa tatcaatatc atgtagtatg gcactttcat
010021 atatgtcaaa attactgtta gatatgcctg atttgttttc tgtttcttta tgtaatttaa
010081 ctgtatctaa ctaattgaaa tattacagtt ggaaaaggaa gctatcaaca atggcacttc
010141 tccaggacaa gctcatgaca tcgacatacc tccaccacga ccaaaaagaa aacctaacag
010201 tccatatcct cgaaaaagtt gtctcagctc tgagacatcc accagggaag ttcaaaatga
010261 taaggcaaca atatcaaata tgacgaacaa tagcactgca caaatggcag gtgatgcagc
010321 tcttgaggta catacctttg tagtatttcg ttttagttag gtttctattt ttgatttatc
010381 cttttcttta atgtgctatc ctgtttcttt aacaagaaac tcacttacat tcagaaactt
010441 caaagaaagg agatatctga aaaaggaagt tgctccgaag ttcttaatct ctttcgagaa
010501 gtcccatcgg catcattttc ttcagttaac aaaagctctt caaatcatgg tgcatccagg
010561 gggctggaac cgactaaaac agaagtcaaa gatgtggtca tcttggaaag ggattctatt
010621 tccaatggtg cagggaagga tgcaaaagat atcaatgatc aagaaatgga aaggctcaat
010681 gggatacaca tcagctcgaa gcctgatcat tctcatgaaa actgtttgga tacctcaagc
010741 caacaattta agccaaaatc aaactctgtg gagacaacat atgtggattg gtctgctgca
010801 aaagcttcac actaccaaat ggacagaaat ggggttactg gctttcaagc cactggaact
010861 gaaggaagcc atcctgatca aacaagtgat caaatgggag gagccagcgg aactatgaat
010921 caatgcatcc atccaacact tcctgtggat ccaaaattcg acggcaatgc cgcagcacag
010981 ccctttcctc acaactatgc agcctttgca ccaatgatgc aatgccactg caaccaagat
011041 gcctacagat cttttgccaa tatgtcatcc accttctcca gcatgcttgt ctccacattg
011101 ttgtcaaacc ctgcaatcca tgcagctgcc aggcttgcag catcgtactg gcctacagta
011161 gacggcaata ctcctgatcc aaatcaagaa aatctttctg agagtgctca aggaagccac
011221 gctggctctc ctcccaacat ggcatctatt gtcacagcta cagttgctgc agcatcagca
011281 tggtgggcaa cacaaggtct tctccctctt tttcctccac ctatagcttt tccatttgtt
011341 ccagctccta gtgctccctt ttccacagca gatgttcagc gagctcaaga gaaagatata
011401 gactgcccaa tggataatgc acagaaggaa ttgcaagaaa ctcggaaaca agataatttt
011461 gaagctatga aggtcatagt gtcttcagag actgatgaga gtggaaaagg agaagtgtcg
011521 ctccacactg agttaaagat atctccagca gataaggccg acaccaaacc tgccgcagga
011581 gctgaaacaa gtgacgtttt tggaaataag aaaaagcagg atcgctcttc atgtggttcc
011641 aacacaccgt caagtagtga tatagaagca gataatgctc ctgagaatca agaaaaggct
011701 aacgacaagg caaagcaagc atcttgcagt aactcttcag ccggtgacaa taaccaccgt
011761 agatttagga gcagtgcaag cacaagtgat tcatggaagg aagtttctga agaggtggtc
011821 gtctaccagc attccgcata ttcacattta tcttactcgc tgaacatcca tcactgcttt
011881 tctaattcac atttctgctg tcagggtcgt ctggcttttg atgcactgtt cagtagagaa
011941 aggcttcccc aaagcttttc tcctccgcaa gtagaaggat caaaggagat tagcaaggag
012001 gaagaagatg aagtaaccac ggtgacggtt gacctcaaca agaatgccgc tattattgat
012061 caagaactcg acacagcgga tgagccaaga gcttcctttc ctaatgaatt gtcaaacctg
012121 aagctgaaat ctcgcaggac cggtttcaaa ccatacaaga ggtgctcagt ggaagcgaag
012181 gagaacaggg taccggctag cgatgaggtt ggtaccaaga ggattcgtct tgagagcgaa
012241 gcatcgacat gatttgcttt ccacctggtt gctggcctct accaagtcag aagttaaatt
012301 tacatccgag ctaccatagg acttcagacc ttccaatgca ttacctcaca aactcaattt
012361 attgtgtgtt gtatcttaat gcttgccaag cagctcctat agactgcttt taaaccgtat
012421 ctcatagact tttgattagc atttaagcga ctgctaaact ttcttcataa aagggtatta
012481 tccttattat gcattatagt ctggggaagg taataagtgg
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.