Update info.cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK106796 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os08g0467100 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 8 |
| RAP - Location, Length | 23,059,819 - 23,062,909 ( + ) ; 3,091(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 23,059,819 - 23,060,199 ( + ) ; 381 (bp) |
| Exon 2 | Location | 23,060,338 - 23,060,740 ( + ) ; 403 (bp) |
| Exon 3 | Location | 23,061,598 - 23,062,909 ( + ) ; 1,312 (bp) |
| Related Rice IDs | ||||||||
|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | RAP Annotated Accession No |
KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXPro FeatureNum |
| Os08g0467100 | Os08t0467100-02 | 002116B04 | 109647 | 002116B04 | 16523 | LOC_Os08g36390.1 | AK106796 | 19824 |
Chromosome: 8 , position: 23,059,819 - 23,062,909 bp |
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| Sequence (Data source : RAP-DB) | |
|---|---|
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Nucleotide
Fasta Format |
000001 gtttgtttat tctcttctcc ggcttcctcg agctcgcctt agctagaagc ctgtggcccc 000061 gtgatctctc actgttgtgg cttatataga gatagatatc cggctcggtt ccattgatcc 000121 gttcttgtgg agttgtgtga tcagagctgg agagattggc taggttggag gaggaagggg 000181 aattcttggt tgtaagggaa gaggtgggag tggtcaccgg cggtgcgcgc gcggaggcgg 000241 acatcatgct gagttcttgc gcgccgacgg ccgtgccgcc gcaggatgcg tccggtgcgg 000301 cgacggagcc gttccggtct ctgcagatcg ccaccgccgg tgccgccgcg aagaagaagc 000361 ggcggccagc cgggacacct ggtaagtgga gctctataca cacatccaat tacaccggct 000421 acgtacgcgc gttcttgcgc cggtcggtgt ttgtcttgag gaggtagcta acgagcacat 000481 ctgtgggcaa tggcgcgcgt cgccggccgg cgggagcaga cccggacgcg gaggtggtgt 000541 cgctgtcgcc gaggacgctg ctggagtctg accggtacgt gtgcgagatc tgcaaccagg 000601 ggttccagcg cgaccagaac ctgcagatgc accggcggcg gcacaaggtg ccgtggaagc 000661 tgctgaagcg ggaggccggc gaggcggcgc ggaagcgggt gttcgtgtgc ccggagccga 000721 cgtgcctcca ccacgacccc tcccacgcgc tcggcgacct cgtcggcatc aagaagcact 000781 tccgccgcaa gcacagcggc caccgccagt gggcgtgctc ccgctgctcc aaggcctacg 000841 ccgtccactc cgactacaag gctcacctca agacctgcgg cacccgcggc cacacctgcg 000901 actgcggccg cgtcttctcc aggtacggcc accgccaccg ccaccgccgc cgccgcatct 000961 ccatgcatcc attaatctca tattctcaca tttaacatgc caattacata tcgctccaaa 001021 tcttttacac acctagatag tactatacaa tcttctcctt tgcaataatc tttgtcaaat 001081 gcgggcgaga aaggcgtgat gatttttttc tggagaattt ttgcggggtc gctttgccat 001141 tgtaggcctc atcagcaaca ccctttatga gcagtagcat atctatattc attcatgcca 001201 tcctctggta cgagtattta ctcccaggag gggagtagta ttgtggcatc aacaggaaag 001261 agagagagag aggtagctag cctagctgag agatgtggca atgtagcgcg agctctgcag 001321 gcacaattcc cgatgacgcc ctggctatca atcgatgtgt gtggctgtgg cctggccgtc 001381 cgtgtgggcg tagcgtatgc atcatacata tactacggca ctggccattg ctttgatgtt 001441 agcttggctt gtgttttgcc tttgcagggg ctccatttaa tgcaatgcca cggccacgaa 001501 acccaggcta tgctattgct agcagctggt tgcagggccc aaaatttcac gcctgacaaa 001561 acccccctga tcgcctcctt ggcttcttct ccgtccgcct cagtatctca cccatgcgca 001621 tagaatacta gtgtaatcca aagctaagct atagctagag acttttcttt ctggctgttt 001681 atgttgccgg ttattagtac cacctcgctt gtttggtgcc gcgtgggggt tgtttttagt 001741 ggcgctaacg agatgcggcg tgtggatgtt gatgcgcagg gtggagagct tcatcgagca 001801 ccaggacgcg tgcaacgccg gcaggccacg cgccgccgag gcgtcatcgt ccccgggacg 001861 cggcggtggc gtcgtggttg gtgcgccggc ggcagcatcg tcgtctcagc agcagcagct 001921 ttttgcggtg ccggcttcgt tgtcgcggac ggcgtccagc gccagcccgt cgagcgacct 001981 ggtggtgagc ccggtggcct ggcctgctac tggtggtggt ggtccggcaa tggtgagtcc 002041 ccgtgctgcg gcgccggctc ctgctggcgg tagcatcgcg gcgttccacc accggttcac 002101 tgacccggcg ctgtcgccac cgacgccgtg tggtggccgg cgaggaggat gccacactac 002161 ccacagcctg gagctgcagc tcatgccacc gcgcaccacc accacctgcg caggcggcag 002221 cctcggtggt actccagttg ccaccgccgt tgggtactac gcttcctctt cgccgcattc 002281 gcctgctgct gctcttccgt cgcggcagcc ggtcgccgac gcaatgcggc tgcagctctc 002341 gatcgggttc ggcggcgcac gcgatgatgg caacaacaac agcagcagca gcagcggcga 002401 ggtgtcggcc tcggcgacga ggctgaagga ggccgcccac gagcagctgc gtctggcgat 002461 ggccgagaag gcggccgcgg acgaggcgcg cgcgcaggcg aagcggcagg cggagctcgc 002521 cgaccaggag ctggcgaccg cgcggcggat gcggtaccag gcgcaggtgg agctcagccg 002581 cgcgcacgtg ctccgcgacc acgccatacg ccaggtcgac gccacgcagc tgcagatcac 002641 ctgctacagc tgcagccaca agttccgggc gagagcggcc gccatgatca gctccgacgt 002701 cgccagctac gtctcgtccg tcgtcaccga gggcggcgac gccgaggtcg acaacgacgg 002761 caacttgcac cgccgccgcc tcaacgctga cgatggcatg ccaaggggcc attctaggac 002821 gatggcaatg gacctcaact agctcgcaaa aatcactgga agaaaaaaca atcttttttt 002881 ttcttttctt ttgtgccaga ttgctctcct tttgttttac caatgagcta gctggtggtg 002941 gtatgtgctc atgtgcatgc accatgcaat ggcgatgtat tgtaattaga tgcagtgatg 003001 agatcacaag ctccagtgcc tagtggttgt gttctctcgc atggcagatt ggctgggcag 003061 gaaaaagcta aaaggggtct actactacgc t |
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| AK250971 | FLbaf100p19 | 2343 |
| more... (Total Hit Count: 3 ) | ||
