cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK072408
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os08g0531000
(
IRGSP 1.0
)
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RAP - Chromosome No.
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8
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RAP - Location, Length
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26,527,636 -
26,533,478
( + )
;
5,843(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
26,527,636 -
26,527,869
( + )
;
234 (bp)
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Exon 2
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Location |
26,529,318 -
26,529,409
( + )
;
92 (bp)
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Exon 3
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Location |
26,529,584 -
26,529,650
( + )
;
67 (bp)
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Exon 4
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Location |
26,529,766 -
26,529,885
( + )
;
120 (bp)
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Exon 5
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Location |
26,530,039 -
26,530,270
( + )
;
232 (bp)
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Exon 6
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Location |
26,530,772 -
26,530,853
( + )
;
82 (bp)
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Exon 7
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Location |
26,531,232 -
26,531,364
( + )
;
133 (bp)
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Exon 8
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Location |
26,531,579 -
26,531,784
( + )
;
206 (bp)
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Exon 9
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Location |
26,531,880 -
26,532,005
( + )
;
126 (bp)
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Exon 10
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Location |
26,532,539 -
26,533,478
( + )
;
940 (bp)
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Chromosome: 8
, position: 26,527,636
- 26,533,478
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 agttagattg cattagctag ctgtagaaag ctagccatgg ttagtaggaa gagaggagga
000061 ggaggaggcg tggcaatggc ggtggcgatg ctgctggcgg cggcgagcgc gtcgcggccg
000121 tcgtcgtcgc tggaagggtt ccagccgctg tcgaagatcg ccgtccacaa ggccaccgtc
000181 gacctccacg gctccgcgtt cgtcagcgcc acgccggcgt tgctcggcga ccaggtacac
000241 gcccgccacc gccgccgccg ccatggtcgg ttagagagag agagagagag agagatcatt
000301 aatgttttaa tttgagacct gaattgaaat atatagatcc ggggagcaga gaatctggcg
000361 aaattcttgc actcagatca cgcagattat gttaagctga ttaatccaaa tcgatctact
000421 cctatatatt atatccccat ttcatatgca tgcgtggtgt gtttagctaa ctgaagtagc
000481 tgaccaagaa gtgaaaatat ctgagttgtg cgactgttgg tggattcgcc atcgccaggt
000541 agacgacacg agtgaccacc ggagcagaaa tgcagaacag catagatttc gtcgtggtgt
000601 gttaattcac gcgatggggg aacggtcggg tgcacgttgt tttttgcatt ttaaatgcaa
000661 acccctaccg ttcaaatagt atttattatc ctagtagggc acaaaaaaaa gtttattttt
000721 ttcttaagaa aaaaagttat tgtcagcatg tacagctaac ggcagattgt atgttgtata
000781 ctgtagtaca gatcacggct aaccgtatct ctcatcattt aatttgttgt tggtttatag
000841 gccacaacca aaatttaaat cttaaaactt aaagttgagt tgaagaagtt ttcattaatt
000901 ttttattccg taaaatagag tttttttttt ctcaatcgta gtttattttt cagtattgat
000961 ttttaaacca gtaaaaatat aaagatatgg aaattttact ataaattttt tttggtactt
001021 ctgtttattt tctctgtgat ttatcttagc acttagcaaa aaataaatta aggcatctta
001081 gcatgaagca tcaaggtcag cgtgtgcaag taggagacac ttaatttgat cattttaatt
001141 tgatgctgtc acgcaagaac taaccagagg tggcgcacct tgactttgtt tctttaatta
001201 acgagcattt agcatggaac ttttttttac ctactgtaac ctgttgctta gtgagaaaag
001261 agtatagagc atgaattctt cgagttgggc ccttcggagt ttttgtctgc tgtacagact
001321 gtcaccggcg acggagtcaa aaaattatag aagactaaaa atatagaact cgactaatga
001381 agtattaatt tttcaaaaaa aaatactata tggtgaatta acaaaattta agcaagtttt
001441 tggaggcagt tcaagggctt aagccttagc taccctaggc ctgcctccgc ccctagccac
001501 cggtgataat attctactcc gtaacagcta gcttacttga aaaaaagaag acgatgaaca
001561 ataaataagt ttaaataaga agtggtaatt aaacatgtga aattttgata aaagtatagg
001621 agtttcaaat ttgcatcaac atcaatcaat ttggcatact gaatgcacta catgttcttc
001681 agggagaaga cacagagtgg gtcacggtga aatacggctg ggcaaaccct tccgctgacg
001741 actggattgc tgtcttctct ccggccgatt tcatgtacta ctaattacaa caaaatcctt
001801 tcaaatttcc acattttgat cgtgaaagta gttcctttta ctcatcagtg gacacatttg
001861 atcgtgaaat tagtttcctt cactcatcag tggacacatt ttgatcgtga aattagttta
001921 aactgttaaa tctgtgtcac ttgtgcagct cgggttcttg ccctaatcct tccagatacc
001981 cggatgagcc gctgctctgc actgcaccaa taaaggtgga ttaactgcaa tttctctgaa
002041 cctgaatctt aacaagtggt tgctgcacat atgaactgat gatgaacatg tttatggatg
002101 attaacgaat caattgattt gcgcatgcag tatcaattcg caaactactc ggcgaactac
002161 gtgtactggg gcaagggcag catccggttc cagctcatca accagcgcta cgacttctcc
002221 ttcgccctgt tcaccggcgg cctggaaaac gtacgtgata ttatgatcga ttaacccaat
002281 taagaaagaa actaattaaa actgcaacta attaatcaat cttgatgcaa ttaatcgcaa
002341 tatatgtaat gaagaactct gatgaaatga gatgaaatcg acggcgttgt tgttgatgtg
002401 cagcctaagc tggtggcggt gtcggaggcg atatcgttca agaaccccaa ggcgccggtg
002461 taccctcggc tggcgcaggg caagtcgtac gacgagatga ccgtcacatg gaccagcggc
002521 tacgacatca gcgaggcgta cccgttcgtc gagtggggca tggtcgtcgc cggcgccgcc
002581 gctccaaccc gcaccgccgc cggcacgctc accttcaacc gcggcagcat gtgcggtacg
002641 cacgcacgca tatttagatt ttctctctct ctctctctct ctctgaaact ttttaatttt
002701 tctaagaaaa actctctcaa aacttatttc caaactaaaa tcttttagcc acgccaacta
002761 gattagcgtg atgaaacaat actgtcatgc cggtctagct aacatgatat cgttatttcg
002821 ccatatcggt tcggctggtg tggtaatatt atttcatcat gctaccatgg acaataacat
002881 tataaagctg tcatgtctgc tacgagtggc atgccagacg agatgacatg gtaaaaatta
002941 tttagatttt agaaataagt attatgatag tttattttta aaatttaaaa ctaaaaattt
003001 caataaataa taaaaataat cacattatgt accacaccgc tccatttctt tctacgaatt
003061 attggttaag ccgtacaaaa ataaacgatc aacaaaaaga aatttgtaaa ggtgagtgag
003121 cttgtatgct tttcaggtga gccggcacgc actgttgggt ggagagaccc cgggttcatc
003181 cacacagctt tcctgagaga cctgtggccc aacaaagagt aagtggcatg ttcgatcttt
003241 aggactgaat agtatggaat gctgaaatag atgaatgatt taagtataca aatgaatgaa
003301 tttactatta taaaattgga aaatgattta caataatact tttaaaaaat tatatgtaga
003361 aagtatatga aaaatcacat tactatttag gagctaggaa agcgtgcata ttttttatgc
003421 ttttatattc tattctatcc agggaaaaga aacctttgta tgtactatta taaaataatc
003481 tttgatcatt gcaaggtgat tagtgcagca gcaagagtta attaattatg tgaaatcatg
003541 atgaacaatt gtatattcag aactgtggta tgtatgtacg tatgatgtga tttcaggtac
003601 tactacaaga ttgggcatga actttctgac ggatcaattg tctggggcaa gcaatacact
003661 ttccgggcgc cacccttccc tggccagaac tcgctgcaac gcatcatcgt cttcggcgac
003721 atgggcaagg tgaaaatttt cgtttctgac gaaggagcaa agcctgcaag aatgttcaga
003781 aaccgttcat caacatttgc ctctagatca atcagaaatt actactcctc catataaaac
003841 ggaataaatt cttatgtgac atgcattttg acaaattgca cagctgttat atatatagtg
003901 taataatacc gtaattgatt gatctgaata tatgcaattt caggcggaga gagacggatc
003961 aaacgagttc gccaactacc agccaggatc tctgaacacg acggacaggc tggtcgagga
004021 tctggacaac tacgacattg tcttccacat cggtgatctt ccgtacgcca atggctacat
004081 ctcccagtgg gaccagttca ccgcccaggt cgcccccatc accgccaaga agccctacat
004141 gattgcaagg ttagtatctg ttattgtgca atgttcagac aaactcaaca aatgttcagg
004201 catttgttca tattcatttg gcattttcgt gtcgattgat gcagcggtaa ccatgagagg
004261 gactggccca acaccggagg gttcttcgac gtcaaggact ccggcggcga gtgcggcgtt
004321 ccggcagaga ccatgtacta ctacccggcc gagaatcgag ccaacttctg gtacgtttcg
004381 tagcccactt ctatatattt catttcacgt ttgaggaggc cacaaaagcc tgtgaataag
004441 tcaaatggta tatttacaaa agaaaattaa tttgtgaata taacttttat atacgtgttc
004501 ttagcgatct aaaagtaaaa actgaaaaat aaactccaat gaaaaaaacc ctaaaatcaa
004561 cttcaaattt aaagttggaa atttaaattt tggctaataa gtataagcat aagtgaaaag
004621 atgaggctga taaattgttt atccaatccc gcttcattag tttaagcttt tgtgtaaact
004681 gattgcgatt ttacgtatga tgagtagacc acaaaattct cgacatatgt aaattgtata
004741 ttgatcatcg ctccatcggc ttaaactttt tttggttgaa ctggctggtg taaattgttt
004801 atcgatcatg ctttatcagt ttaaactttt ttttctatca tatgctctat cggattaagc
004861 tttttgggtc gaactggtcg gtgcatacac gaacacgaca caggtacaag gtggactacg
004921 ggatgttccg gttctgcatc gcggactcgg agcacgactg gagggagggt accgaccagt
004981 acaagttcat cgagcagtgc ctgtcgacgg tggaccggaa gcaccagccg tggctcatct
005041 tcgcggcgca ccgcgtgctg ggctactcct ccaactggtg gtacgccgac cagggctcct
005101 tcgaggagcc cgaagggagg gagagcctgc agcggctgtg gcagcgccac cgcgtcgacg
005161 tcgccttctt cggccacgtc cacaactacg agcggacgtg cccgatgtac cagagccagt
005221 gcgtctccgg cgagaggcgc cgctactccg gcaccatgaa cggcaccatc ttcgtcgtcg
005281 ccggcggcgg cgggagccac ctctcggact acacctcggc gatccccaag tggagcgttt
005341 tcagggaccg ggacttcggg ttcgtcaagc tcaccgcgtt caaccactcg tcgctgctgt
005401 tcgagtacaa gaagagcagc gatgggaagg tgtatgactc cttcaccgtg gagagggatt
005461 accgcgacgt gctcagctgc gtgcacgaca gctgcctccc caccacgctc gcctcctgat
005521 gaatgaaaca agggaaagga tcattattag gatgcatgag ttgatgcctc atcgtcaaaa
005581 tgctggcagc tgagaaagag tgatcggtcg gtcgatcgag ttgggtttta ttttttttct
005641 tcttcttcaa ccatttcgat caggtgtggt agtggtcgat cgcttggctc gatcgtgttt
005701 ctcttcctca tggatggtga tgttgtgcaa taaaattgct tagctgctcg ggcacaaatg
005761 tctaataaga ttggcaatct gaatttctga gtccacacaa tgcccataaa tgaataaatt
005821 atagaaacaa ctatttacgc cgg
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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