cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK101442     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0759400 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 33,673,210 -  33,678,261  ( - );   5,052(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 33,673,210 -  33,674,550 ( - );   1,341 (bp)
Exon 2 Location 33,676,614 -  33,678,261 ( - );   1,648 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
UniProt
Accession No
UniProt Entry
Name
Os01g0759400 Os01t0759400-02 J033039E18 212284 J033039E18 14328 LOC_Os01g55450.1 AK101442 19746 AP008207.2 255672756 BAF06225.1 113533842 NC_008394.4 297598437 NM_001050846.1 115440062 NP_001044311.1 115440063 Q5JLS2 CIPKC_ORYSJ


Chromosome: 1 ,  position: 33,673,210 - 33,678,261 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 ggtacagagc agaggagggg ggagagagag agagagagag agagagagag agtcgtgtgt 
000061 gcgtgtgtcc ccggggttct agctttggga tgctgatggc gaccgtctcg ccggcgcgga 
000121 gggagccgac gccgcaggcg gtgcgggcgt ccccgatgcc atcggcggcg gcggcgttgg 
000181 tgaggagagg cggtggtggt agcgggggga cggtgctggg gaagtacgag ctggggcgcg 
000241 tcctgggaca gggctcgttc gcgaaggtgt accaggcgag gcacctggag accgacgagt 
000301 gcgtggcaat caaggtgctc gacaaggaga aggccgtgaa gggcgggatg gtccacctcg 
000361 tcaagcgcga gatcaacgtg ctccgccggg tgcgccaccc gaacatcgtg cagctgttcg 
000421 aggtaatggc cagcaagacc aagatctact tcgtcatgga gtatgtccgc ggcggcgagc 
000481 tcttctcccg cgtctccaag ggacgcctca gggaggacac cgcgcggcgc tacttccagc 
000541 agcttgtctc cgccgtcgac ttctgccacg cccgcggcgt gttccaccgt gacctcaagc 
000601 ccgagaacct cctcgtggat gagaacgggg acttgaaggt ctcggacttc ggcctcgccg 
000661 ccggccccga ccagttcgac cccgacggtc tgctccacac gttctgcggc acgccggcct 
000721 acgtcgcccc cgaggtgctc aggcgccgcg gatacgacgg cgccaaggcg gacatatggt 
000781 catgcggtgt catcctcttt gcgctcatgg ccgggtacct ccctttccat gaccacaaca 
000841 tcatggttct gtaccggaag atctacaatg gggagttcag gtgtccaagg tggttctcca 
000901 aggattttac tagattgata acgcgccttc ttgacgcaaa ccccaaaact aggatcaccg 
000961 tgccagagat cattgagagc gattggttca agaaaggata caagccagtc aagttttaca 
001021 ttgaggatga caagctctac aacctgtctg atgacgtgct gaacttggag cctgctgatc 
001081 ctgttccccc accattgggt ttggcacctc ctgttcctcc acctccacaa ggggatgatc 
001141 ctgatggttc agggtctgag tcagattcat cagtcgtatc ctgcccggcc acattgtcaa 
001201 ctggggagag ccagagagtc cgtgggtcac taccacgccc agcaagcctt aatgcatttg 
001261 atatcatatc attctcaaaa ggattcaact tgtctgggct gtttgaggag agggggaacg 
001321 agatcaggtt tgtatctggt gagcccatgt ctgacattgt aaaaaagctg gaggagattg 
001381 caaaggtcaa gagcttcaca gtgcggagga aggactggcg ggtgagcata gagggtacac 
001441 gcgaaggagt taaggggcct ctaaccatag gcgcggagat atttgagctt acaccctccc 
001501 ttgtagtagt ggaagtaaaa agaaaggcag gtgataatga agagtatgag gatttctgca 
001561 acatggagtt gaagccagga atgcagcacc ttgtgcacca gatgctccca gctccaaatg 
001621 gaactcctgt gagtgagaag gttgaaaggt aatgattctc tcctgatttt acttatatgc 
001681 attgtagcta aatagggaag caaggatttt gtgttgttta acatgcgcaa ccgggcagaa 
001741 agttaaattg attgatgctt cagttccaat aattacataa caatgtttca cttcttgact 
001801 atacatcctg tatttcaaat tgagcgttca agagtttgtt tgctaaaagt taattgattt 
001861 ttattcatgc tatttgtttt tgttaacgta tgtttaattc acaatcatgc ctattgccta 
001921 ataccagtat gtagaaggaa ttagatttcc ttgcacggac acaatttaaa gtaggaaagc 
001981 cttgcaattg aaaacctcga acaactggaa cttttattat ttctagagtg gtgaaagaat 
002041 gctataggtt ttgctgttag attttgccaa ccattaacta gcttgcctcc tgcaatccaa 
002101 tttcacagcg cttggataat gcgtatgtct ggaaatttgc tgccacttga ccattgcaag 
002161 tgtgcttcgt gaaaagaagc aaatttgaat ggttctaatc atcctagttt gtggctgtta 
002221 aactgattat agattgtttt gtttcattct agagcatgat ttggtttatc taacatctgt 
002281 gctcttttaa tctatgctac gaactcaatt tttcgtaaaa tctttcccgc accctattct 
002341 tatggacttt ttagcttgtg atagattgta taagataaat gtcttttcta gtcatcagtt 
002401 aatgaaaaca ttttcgcttg tcttatctat cttttggagt tactttaaaa agtgattatg 
002461 cactgttcta ctgcacctta gcttgtaaac ttcctgctct tatttatttt tctttatgtt 
002521 tccatttttt ttggataatg gaattcaatc cagtattgat gatgattcca tgttacccca 
002581 gcatttattg gtgttgaatg tttacatgtg tcataattca tattgaaaaa acttttgaaa 
002641 acaaatatag aaaggaaccg ccaatatcat gtccttctgg tttccccatt gttgttatca 
002701 ccaacttcca tggattggca ttgtgctgca catcagcata tgggatagaa tgggagcttg 
002761 aagggaatgc ttggcagtac ctccgagtac cgaaatgtca tttttacaaa gaacatgtgc 
002821 ttcactagat tttcagcatg ctaggtaaat gttgaaagtg ctgtataggt ttattatctg 
002881 gtgtagctcc ctctgacata gtaataacag gttgctttat gggaaacctg gtagatttta 
002941 tctatttaat ttggtgaaac catgaaaatg caaacatcat ggctgagaca ttgaaaatta 
003001 caaaacagaa agggcgcata gcaacaccat atactattca tgcaaaccat ttctactatt 
003061 ttaacctgtg agtttttgat ggtttctagt ttctttttac attcaaatgg gctctaattc 
003121 ctgattttag gaggttcctt tcttttcagt ttcattgctg ttattgataa attatctttt 
003181 ttttcattaa tgataacttt atactttgat ggatctttgt tgaacactta atctggtgca 
003241 catgttagcc acccaccatt ataggagaac acatgggaca catttacctt cagaggtaag 
003301 gagggttatg tgcgtaagct gtgcctcgga ggtagatagg tgtgtttcca gaagactttt 
003361 tgttacattt gtcaacctaa ttttcctcca tcggagtagt acattctgta ctgcgcaata 
003421 ctagcatcag ttaggaaagt tggttcaaat atgctccatg gtacgtgggt gtacctggag 
003481 ctgttctgta gtcttgtttt gaatcttcaa tttaccttga agaattttgc ttttgccagt 
003541 gaactgttat agtccatttg aattgtttga aatgctacta caaccggaaa ctattgcttt 
003601 ggttctcata gttcagaact caataggaaa tagaagtcta ttgctgttat tacatacaag 
003661 tgtgataaga ctaacagact gacatttgat tatttccttc ttgtcctgca ggtcttcaag 
003721 cttacaggct cccctcaccc tgaagttgat aggaacagaa ggcagcatga gctagagaca 
003781 ggagcttcca tgcagttgac agggagatct cttttaccgg accaaacctg accggtctgg 
003841 ttcccgttga tgagctcgtg gttttgataa ctagcaagag ttctctttct ctggatggcc 
003901 taagatcgtt tttaggcaat ggatcgagac agtggatgta gatactccgg ttgtggatgg 
003961 tgcccaggtg ggcgtttaaa gtggatgtag ataccctggt tgtggtggtg cccaggtggg 
004021 cgtttaaagt ggattgtact ggccagtttt ctctcgactt agcggctgtg tgcatctgcg 
004081 gtttggtttc tttggcagca tcgaataatt ttgtggtaac catgattctg gtcgggggac 
004141 agttgattga ggtatgggag ggatatgcat gagccgggca tgtgccgacc gattggattc 
004201 cgaatcttcc attcctgatg ccattagccc attattggat gcgaggtgac agatttgggc 
004261 actgcagtgc ggttggttgg ttggggcctg tggggactgg gggtcgagat tacttggacc 
004321 tgctgtgctg cagcggcttt ggctgaggtc accgagcacg tgagagcatc ggtgggtggc 
004381 atggttggcc taccccggca gtggtggcgg ccggctcggg ccacgagagc gccgcgccgt 
004441 ttgtggtggc gcacggctct gcagtcggcg gcgggcccgt tgttgcgcat ttccgtgata 
004501 aagatcaccg tggtatgtcg tattctgtta tacaatgctc tttttgtgga ttcgaacttc 
004561 gaatatggag ttatggacac gggtggtcat cgatggagac aacagtggcg aaccggcgat 
004621 ttcatatggc tcagtgagat gctttaaggt acataacaat ttgaggtatg cattcattta 
004681 atcatgacat ggcatgatta accttggatt tgtgtgaaag ctatcactat aacgacctgt 
004741 actcttggtg atattcccca ccgtgccaat ttcctggtat ctacactcct caacggatat 
004801 gtcgtggaaa tgcagcattt ctaacccaac agatacaggg atcatatttc atcctacaaa 
004861 gattatgtga aagagatcag cataataatg gaaatacgct taaaaagtaa aatcatgaaa 
004921 attccatgtg atagttagga tcgacaatga caatgattat aatcatatca caatataaga 
004981 tatagcctat tgtaatataa gaatttgatg ctctgtttta taatgttact acctctttac 
005041 ttcttgtttt tg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs
Acc. No. Clone Name Length
CJ689012 whrd16e02 759
more... (Total Hit Count: 13 )
/rice/oryzabase