cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK065554
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os08g0398400
(
IRGSP 1.0
)
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RAP - Chromosome No.
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8
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RAP - Location, Length
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19,099,911 -
19,103,941
( + )
;
4,031(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
19,099,911 -
19,100,040
( + )
;
130 (bp)
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Exon 2
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Location |
19,101,735 -
19,101,930
( + )
;
196 (bp)
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Exon 3
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Location |
19,102,201 -
19,102,321
( + )
;
121 (bp)
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Exon 4
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Location |
19,102,445 -
19,102,536
( + )
;
92 (bp)
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Exon 5
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Location |
19,102,609 -
19,102,705
( + )
;
97 (bp)
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Exon 6
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Location |
19,103,258 -
19,103,941
( + )
;
684 (bp)
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Chromosome: 8
, position: 19,099,911
- 19,103,941
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 agaatttgcc ctcctcactt ctatacttca atccccttcc tttatttttt tttttgggag
000061 gggccgaggc aaccgtcgcc actccgacga tcccgtccca tccgccgccg ccgccggaga
000121 tttcctcgag gtaagcccta ccccgctcct ctccagcctc tctccccttc ggcgggcgcc
000181 cagcccgagc cccgacctcg atttcttgga atttcttggc gagcgtttgt ttcttggggt
000241 ttcctctaga ttttttcttt tttttattat tttggggacg gatttagctc tcgtggagga
000301 gattgggcgg ataatttcgt cggagggggg agggggaggg ggatgttgga atcgggtggt
000361 gggtaatttc gtcgattctc cggtcctttt ccttgagttt agcctgggaa ttgcggttgg
000421 ttcttggacg cggtttgagt tcttggtttt ttccactttc tgtgcggaca gatttagggc
000481 ttgcgctttg cgagtggggg taaaattcga tggtgtgctg ttccagcttt gtccacatac
000541 tgcttggaaa tttcaggagg ttttttcagt caagtcaagc acatcttttt tgctagacta
000601 ggccatgaga tggaggttaa cgtcgaactg tacccacctc agctaaaaat aataataatt
000661 ctcaacaaca gtatccaagt ggctgtattg tttattcttg tttagttatg acgcagatga
000721 atactactcg ctaaagattg tgactttctt agttgtcacc tcgtcgtgtg gagccctgtg
000781 ggttcttgct cttgactttt atcaaacaat gattgcttgg caagtgtctt gtttgattcg
000841 tctgcccttt ggcttgcatc gccagagttt gctggcttgc gctggcattt aatcaaaagt
000901 ataatcattc ccccaagtat aatcaggatt agcataatct ttagcttcaa ctatttatat
000961 gatatatttg gcttgtctgt agtctgtagt ggccaagaac atcctgaagc agatttatcc
001021 tatcaggcta tcagcactaa gttgatcggc acgtataggt tttcttttgc gtcattcttt
001081 ttcattactg catttctatg gtgaattgtt ttcttttctt ttgtatggct acatctatta
001141 ccctgttgac ttctgtgagc ctgtgatgta ctccctccgg gctgataata cttgtcattt
001201 tggacaagcg cacggtcttc aaaaaacaac tttgaccatt atttcctatt ataatatgta
001261 aaaaagtgtt aacaaatata tgatcatatt aaagtacttt ttaagaccaa tctatatatg
001321 tagtcaccat atttgaaaga caaatatttt aaaaatgatt tatataatca aatattctaa
001381 agtttgacct cacccttgtc caaaacgaca agtattatca gcccggaggg agtagtaatc
001441 ttaggcattt ttcagggaat gattacacag tataagtttg agtaatgtgt tatcatgata
001501 tgcttttcaa caagatatac atattttttg caacactgtt tggtctaagt tatctgaaat
001561 tgcaattgct tgacttttca tttgggatgc gttgggcaat ctattgtcct gacatacatt
001621 catcttcatt tgaagccatg gctttatctt ttttaattca tatcttttgt ttctgtttgt
001681 atgtactaaa aacttgaaat atgaatttcc attggagaag ttaacaccaa cggagtataa
001741 gcaagattat ggcaaaacat tcagttgtta gttgtttcgt tagcatatgg caccatttgt
001801 aattctgcat ttcttccttt ctagataagc catgggtcaa gcactcggtt tggtacaagt
001861 agatcaatcg acagtagcca tcaaggagtc ctttgggaag tttgatgagg ttcttgagcc
001921 tggatgccac tttttaccct ggtgcatagg gaagcagatc gctggatatc tttccttgcg
001981 tgtgcagcag ctggatgtcc gttgtgaaac aaagactaag gttccccagt ttattttctt
002041 aactctggtt tcttttatat ttcatggcaa gtgtctggag caattgtcag gcatgataaa
002101 aaatggttct caaaattctt gcattttgtt ccattcgttt actcctttat gataacatac
002161 tgatgatggt tatgtgcaca tatctctgtt ttccttattc ttcacttaca ctaatgcatg
002221 atgcatcaaa gaataaaccc accttttctg agctctctga cgatgtatac cattttgtgg
002281 atatctgcag gacaatgttt ttgtcaatgt tgtggcatct gtgcaatacc gtgctcttgc
002341 tgagaaggca tcagacgcct tttacaggct tagcaacacc agggagcaaa tccagtcgta
002401 tgtttttgat ggtaaggttc ctgtatgctg tgaacattca tgcatccgat gcatttgcag
002461 ttcatactct tctgattacc ttctctatgt tttgcctcta ttgttcaatg ctaacagaac
002521 tttcttcctc gcagtgatca gggctagtgt tccaaagatg aacttggatg atgcatttga
002581 gcagaagaat gagatcgcaa aagctgtgga agatgagctt gaaaaggttt gtgttcaata
002641 attggtggtc atctagagca tagtggagtt ttatactgac ctagtatata ctctgtaggc
002701 aatgtcaatg tatggttatg agattgtgca aactcttatt gttgatattg aaccagatga
002761 gcatgttaag agagcaatga atgaaatcaa cgcaggtaag tattaattaa aacatcaatt
002821 cattccattt cttcagagac attatttggc ttggtgttta tgcttgacat ttgagcttgc
002881 attggaaaca attttctcct gtttagacat gaaaatgtta aattctcttt ccgagaaaca
002941 aaaccatgtt tatattgtct agttttattc aagttttata ctgaaacact gaaaattgtt
003001 gccacaaata tttttaggct ttcaacacag taacactgta agttatatat agatggaaca
003061 ctgaaaagtt atatatagat gtacataaca tattatgaat attaacttcg tgaatacttg
003121 caccataaca gtcataagta acacaggcac atgtaactgc aacctattga ttacattgtg
003181 tgcaacaaaa aatgtgttgg tcaactagtc aagtaaatat ttcgtgcttt ttaagggcct
003241 gcaacatata tgtttggttg gtctggtgtt tttctaaaga tgagctgtat ggctgtaaat
003301 gtgctggacg gcaacatagt tttaactgct gttatttgat gatacagctg ctaggctgag
003361 ggtggcagcc aatgagaaag ctgaagcaga gaagattctt cagatcaaga gagctgaagg
003421 agatgcagaa tccaagtact tggctggtct gggtatcgca aggcagcgtc aggctatagt
003481 ggatgggctg agagacagtg ttcttgcctt ctccgagaac gtgcctggga cctctgccaa
003541 ggatgtcatg gatatggttc tggttacgca atacttcgac accatgaagg agataggagc
003601 ctcatccaag tcctcttcag tgttcatccc tcacgggcca ggtgccgtca aagatatcgc
003661 tgcgcagata agagatggtc agctccaggc caaattgatc taagaggatg gcagggaatg
003721 gatgttctgg atttcttggg cattacgaaa gtctgcagta ataccttatc tacgtattcg
003781 atattttgtg agataaaaac ttaggcaaaa gaagttctat tgtaagtatc acatgcacgc
003841 gtgcttcagt accgtttgtt catagtaatt cctgaggtta tttccctaga cgagtgtcaa
003901 tatacttctt gaattgcatg tttctgtaaa taattcctaa gtgttaccgg gctgtttgga
003961 attatttgca tgttgatgtt agtgacctta agtaatgtcc catcttatta tgtgatgtca
004021 tgatgatttc c
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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