cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
|
General information
|
|
RAP - Accession No.
|
AK061111
Link to RAP-DB
(
IRGSP 1.0
)
|
|
RAP ID
|
Os08g0557700
(
IRGSP 1.0
)
|
|
RAP - Chromosome No.
|
8
|
|
RAP - Location, Length
|
27,992,607 -
27,997,515
( + )
;
4,909(bp)
|
|
Exon (Data source : RAP-DB)
|
|
Exon 1
|
Location |
27,992,607 -
27,992,989
( + )
;
383 (bp)
|
|
Exon 2
|
Location |
27,993,126 -
27,993,256
( + )
;
131 (bp)
|
|
Exon 3
|
Location |
27,993,415 -
27,993,483
( + )
;
69 (bp)
|
|
Exon 4
|
Location |
27,995,106 -
27,995,177
( + )
;
72 (bp)
|
|
Exon 5
|
Location |
27,996,253 -
27,996,325
( + )
;
73 (bp)
|
|
Exon 6
|
Location |
27,997,106 -
27,997,515
( + )
;
410 (bp)
|
Chromosome: 8
, position: 27,992,607
- 27,997,515
bp
|
|
|
Now loading
|
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 gctcattcct ttataggaaa gggctgggga aataaaatct aaccaaattt atgcgattat
000061 tgttccaact ccagctcatg ctcatcaatt caaattaagt agaaattaaa attaaattcc
000121 aagagcagct cacaacagca caaaagaaaa ttaaaacttg cctttgggaa tccaatgccc
000181 actcctcccc atataaatca cacccgtcgc atcgctccga ttcccaatcc ccacgcttcc
000241 attccatcca tctctctcgc tctctcgctt gctcgccccg ccgattcccg atcggagtga
000301 ggagctcgcc gctgctgctt gccatggcgg ccgccgcgct gaccagccag ctcaacgccc
000361 tcgtcaacaa catgttcgcc atggtgagtg aggcgcttca cacgctcttt ttacgaattt
000421 tttgcgccat ttttggcgga attccgggtg tggatgacga gatttttttg gggttccatg
000481 tgtgatgtta ttgttggatt gtgtgtattg gggagttagg gtttgctgga cgaccagttc
000541 cagcagctgc agatgctgca ggactccacc gcgccggact tcgtctccga ggtcgtcacg
000601 ctcttctgcg acgacggcga gcggatcatc tgcgagctct ccaggcagct gtgcgtgtaa
000661 ctgtttcgct tgcttttgat cggatcgttc gtgttcgtgt tggggattgg cttgattttg
000721 gtttgggaga tttgattgct gcgtgtgtgt gtgtgtgtgt gtgtgtgtgt gtgtgtgtgt
000781 gtgtgtgtgt gtgtgtgtgt gtgtgcaggg agaagccaaa tgtggatttt gacagggtgg
000841 actcgtatgt gcatcagctc aaggggagca gcgcaaggtg agcttttccc ctgtcctttt
000901 ctggatatgg aaatttatgt tgttatggat aattattgct gttattgtca cttggcgcac
000961 gaaattgggt atgagatccc tttcgaatgg gagaatttaa agcgttgtgc gaagcatgta
001021 gtcaactttg ggaggattgt catatgtttg attattgcat cttttatggc gtagaatctg
001081 acaaaaatgg tccattccac ccaaagtgat tggacagttc gaagagcagc ggttcacatt
001141 gttctatcat atgaattgcc cttctgagca atttgggatg ggttgtcgtc cgtttgatag
001201 ctgtatcatt ctatcatgta gatatgacaa attcagtccc gctcccatgt tgatcagacg
001261 gttcaaatag tagcattcat attctcctgt tccttgtggt gctccagatc tattcaagga
001321 ggattgtcat atgcttcatt gttccagcat tccttgacat agatctgaaa acatgcttct
001381 gttccatcac acttattgaa tggttcgaag aactttcctc cattccaaaa tgacttggtt
001441 tacacgtgag agtcctatag tttgaaatgc ttcatattta cgaatattgt atctaatttt
001501 acttagaatt ctattttttg ttatttttca aacccggagt gttatcacat tttagattag
001561 ttggtcatta aaaggtagac tgctagagaa tatatcatag attagtgaga gaagggtcta
001621 atggtattcc taagtgtata gaccataaac tacttcacca tggatggtcc ttcagagctt
001681 ctatgcacca tatgcacaaa cagtagtagg atgacacagc atgtaaaatt cctgtttaaa
001741 tgcctttttt ttttttcctt ttggtgtagt catggttttg tacctttaca ccttccttcc
001801 tcgagatccc taatttccct atacccgaag atatcttcct gatggctaca aaagaaaaat
001861 gtttccattt gagatttgtt tactgaattt tggagatctc cttacttggt catatctgca
001921 ggtgctatca aattttcttc ttgctccaga tcttaatagt acctagaatt taatcctgct
001981 ctttatcagt atatcctcag aatgatgttt taaggtacat tttgtaaggg tacactgaac
002041 ctattcaaac aggttgtctg gagtttatcc agattagatt ttttttcttg aaacagaaat
002101 ttaaataaga aattgacaaa caaatccttt cgcctattca atttgggttc aggtatattt
002161 atgtactgga gtgttattct acagaatcaa attatgtatg aaaataactc accatggttc
002221 ttcatgttag atctccttat atatttagaa ctggaactac caattggcat tcatacacat
002281 cactacaaat attaaatctt gttgatagta ggcaactcac aagccagacg gaaatgatca
002341 ataaaaacat gcaaatctga tagtaatatc atcgtcccag aatttctagt aggtcaatga
002401 taatattgca ttgttgaaga tataatcaaa tttgttgctc gtctttccat taaagcattt
002461 gaggagcctt cctgactgta tatccttgca tgtttgcagt gttggtgctc agaaagtgaa
002521 gaacacttgc attcagttcc gtgagttttg ccaacagagg agcagagatg ggttagtacc
002581 tattaataca gtattcccat ttttttatca tattattgca catatcgtta tatgcatatc
002641 ttaacgatga tctagtgcac tcttttctta cattttccta ttgttagtgt tttctgtggt
002701 ataatgttga cgtaatttct tgcattattt tttctattgt aacatatctt catggaaagc
002761 aacaactggc tgattctact ctgcctgttg acttaggatt gtaattgctc cactccaatt
002821 tccaagataa tagaatcact ttaaaaggtg tgactaatgt aaactctatg gcaggcatgc
002881 cttgatttga aatgaaatag tttgattctt atacagaact ggtagatttt tcagtatttt
002941 tttctttttt gaagaaaggg caaaagcttt gccacttatg tattaataaa gcagaagggc
003001 catgacaaaa aacatttaca aaagggaaag ggaaaaacag gggatgtgat gctcgcgcac
003061 cagcccaaaa aacactacac tctgctagtc gattattccc agggttttat ctccttaagc
003121 ttgaccgcac ctgcctttac ccaggctgag gcttcttctt tgatttttgc tagtagggtc
003181 attggggtgg ttgcaacatg acggataact cttgcgtttt gcaggttgtc caatatgccc
003241 ccaaatattt tagcatgcat atttgtagtg gaaccaagtt gttccatcct ctctgtatgt
003301 tgtgcagcta ttcagtaaag tagggtcatt ttggtttgaa atcctaccaa aatatttgta
003361 gtgccaattc ttgggcaagt tttggcacta caattttttt ggtagggtag atttatctca
003421 actccataga tttagcaaaa gttggttcca atccaaatgg ctaccaagta ctactattca
003481 aggctaccaa atacttggta gggcaggaat tggcctcaaa ccaaaacggc cctaaatcta
003541 cattatattg atctttatat cttcatttat gtaatagcct aaaataaaat atgttatttt
003601 tgtgacaatt gtccccttct ttgtgttggg ccttttccat tatcaggtgc ctcaagactt
003661 tggatttggt gaggactgaa ttctatgatc ttcgtaacaa gtttcaggct atgcttcagg
003721 tattaccttg cgttcccaaa ttacatccta tactccctgt tgtgttgcac tgagttggag
003781 tggacatctt aaaagtaagt gattttgtgt aaggtttgga agtgatttgt aaggtttgct
003841 ttatgattgg aacattaaat tgtagagatg gttggatatg atggaattaa tactgttact
003901 ttccgtgcaa cacacaaaaa caatcaacaa tgattagtct gtttgctgaa tgaatagcat
003961 tagtcttttc atgacacata tatgaggtag tacagtggta tagttgctgt gaagcattaa
004021 atagcatgcg agataatggc agttggcaga agatgaacat ggtatattta tttctttaca
004081 aagttggttt tttttctttg tcatttccag tgctacattt gtacttaagc ctttacgtgg
004141 taccacttgg tgtggtaata attatgactt acagatatcg cactcaaaaa ccttgtttgt
004201 cttataacta ttttatttta tcccatcctt gcgtgtggat atatctatgg gataattcca
004261 agaggcctag agttgtttgg tccccaactt gtatttttct tctcataata tgggtagacc
004321 tgatctttta cctccccagt ttggcccttt ctcatttctg aatggaaaat ggtcatttaa
004381 ttctggcttg catttttcga tttcttgggc tgtcaaatct tactagtctt atgacctgac
004441 gatgcaaatt taccttaacc atttatagaa ctgatctgtt attttgcttt ccaatgcagc
004501 tggagcagca aatccaagct tgttacccta aacattaaac tggcgcgaca gtggagctgc
004561 atgtttacac aactactgtg cctttggagt tgtagaacat gctcgtttag cttttatctt
004621 ggagtcattt gtttctggga tgtctgtagc tgtttagcaa caagctgatc tagctttggc
004681 accttcatta ctgagtagtc gctctcagtt tctgtgatgg ggacaaccgt ttccagcaat
004741 ttgtagtatc tgttgttatc tggtgtctca gctatagttt ttttcggtcg tttagaaatg
004801 caacagctgt gcaatttcgc gaaaattgca ttttgctggt tgattagggc ggcttgtggt
004861 atgttgttga gaacaaagcg atacttaata tcgatataat tgctgtttg
|
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.