cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK101065     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os01g0102000 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 1
RAP - Location, Length 88,763 -  90,465  ( - );   1,703(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 88,763 -  90,465 ( - );   1,703 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
Os01g0102000 Os01t0102000-01 J033023E01 211907 J033023E01 14134 LOC_Os01g01190.1 AK101065 33502 AP008207.2 255672756 BAF03660.1 113531277 NC_008394.4 297598437 NM_001048281.1 115433975 NP_001041746.1 115433976


Chromosome: 1 ,  position: 88,763 - 90,465 bp

   Now loading


#
#
Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 tggccgctct ctcctcaccg acggcatctc cagcagcacg ggcattccgg cgccatgggt 
000061 cggcggctgt tgctgctctt cctaatgctg gcacaggcac ccaattccaa tggggattcc 
000121 aagataaaga acgtggtggt gttggcgctg gagaaccggt cgttcgacca catgctgggg 
000181 tggatgcagc ggctgctggg cctccccatc gacggcctca ccggcgcaga gtgcaacccg 
000241 gctccaggac caggtccagc cgactccctc ctccactgcg tctcccccga cgccgacctc 
000301 gtcgtccccg acgaccccgc ccacgccttc gaggacgtcc tcgagcagct gctggggttc 
000361 cgacccaatg actctactgg cgccgccgcc tccccctcag acatgtcggg cttcgtccgc 
000421 agcgccgtct ccgtgagcgc gctcctgacc gacgccgtca tgcgggggtt caccccgtcg 
000481 cggctcccgg ccttctccgc gctggcctcc tccttcgcgg tgttcgaccg ctggttctcc 
000541 tccatcccgg ggcccacgca gcccaaccgg ctgttcctct actccgccac ctcccacggc 
000601 gccgtcgccc acgacaagtg gaacctcctc cgcggctacc cgcagcgcac catctttgac 
000661 tccctcgccg ccgacgccct cgactaccgg gtctacttca agaccatccc caccaccctc 
000721 ttctaccgcc gcctccgcac cgtcgccaac gccgcccgcg gcaccttccg ccgctacgac 
000781 gccgccttcc gcgaccacgc ccgcaggggc ctcctcccgg cgctctccgt catcgagcca 
000841 cgctacttcg acctcaccgg cacgcccgcc gacgacgacc acccggcgca cgacgtcgcc 
000901 aacggccaga ggctggtcaa ggacgtctac gaggcgctgc gggcgggccc gcagtggaac 
000961 cacacactgc tcatcatcac ctacgacgag cacggcggct tctacgacca cgtcccgccg 
001021 cccaatgtcg gcgtccccag ccccgacgcc atccgtggcc cgctgccctt cttcttcagg 
001081 ttcgaccgcc tcggcgtcag ggtgcccacc atcatggtgt cgccgtggat caggaaaggg 
001141 acggtggtgg ggaggccgcc gggagggcca acgcccacgt ccgagtacga gcactcctcc 
001201 atcccggcca ccatcaagaa gatattcaac ctcagctccg acttcctcac caggagggat 
001261 gcgtgggcgg gcaccttcga gcacctcttc acggacctgg acgagccaag gacggattgc 
001321 ccggagacat tgccggagat cccgccgcca tcttcctcgt cgtcgtcgac caagaaagaa 
001381 gacggaggat ggctgtcgga cttccagcgc gagctggtgc agctggcggc cttcctcaac 
001441 ggcgactaca tgctgtcaag cttcgcacag gagtacgagt cgagaatgac gatgacggtg 
001501 aagcaggcgg atgcgtatgt gaggcgagcc gtcaaaagtt tcctggaggc cagcaagcgg 
001561 gccaaacgct taggtgcaaa cgactccgcc attgtaacca tgagaccatc cctcactact 
001621 gcaaccacct gctgccctta gttacctact gtagtacact aaactagtct ctttattaat 
001681 ttaattaatt acctacctta gct

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AV928016 rbasd13k02 597
more... (Total Hit Count: 14 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ666179 whkp6f05 836
more... (Total Hit Count: 10 )
/rice/oryzabase