cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK101063     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0915600 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 41,624,372 -  41,627,202  ( - );   2,831(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 41,624,372 -  41,624,773 ( - );   402 (bp)
Exon 2 Location 41,624,860 -  41,624,953 ( - );   94 (bp)
Exon 3 Location 41,625,035 -  41,625,259 ( - );   225 (bp)
Exon 4 Location 41,625,367 -  41,625,441 ( - );   75 (bp)
Exon 5 Location 41,625,567 -  41,625,635 ( - );   69 (bp)
Exon 6 Location 41,625,742 -  41,625,807 ( - );   66 (bp)
Exon 7 Location 41,625,915 -  41,626,136 ( - );   222 (bp)
Exon 8 Location 41,626,217 -  41,627,202 ( - );   986 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os01g0915600 Os01t0915600-01 211905 J033022O19 14133 LOC_Os01g68700.1 AK101063 2830 AP008207.2 255672756 BAF07102.1 113534719 NC_008394.4 297598437 NM_001051723.1 115441816 NP_001045188.1 115441817
Os01g0915600 Os01t0915600-01 211905 J033022O19 14133 LOC_Os01g68700.2 AK101063 2830 AP008207.2 255672756 BAF07102.1 113534719 NC_008394.4 297598437 NM_001051723.1 115441816 NP_001045188.1 115441817


Chromosome: 1 ,  position: 41,624,372 - 41,627,202 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 aatctctact tgctgctgct tctgcttgcg attgcgagct ctctcctctc tctctgtttt 
000061 tttttttttt ggcttgcaaa gcttttgctt tgttttaggt gcttcttttc cactccttta 
000121 ctgttccccc acttttcctt gctttgtcac gcacacgaaa agctcctgcc tttaccttat 
000181 ctccgctcgc cttccctcac ccccgtcgta gtgggatttg gtggctgctc gcctctcgcg 
000241 tttcttttgc tggattgggg cgttcttggg agctcgggaa ttcgggtggt ttggttgggt 
000301 ttcgtggaga attgcggcag atctttgaga tgaactgcgg gccgcccgac cagttgccgc 
000361 cggcgacggc gccgtcgtgc ttcctcaacc tcaactggga ccagtccatg gacgcggcgg 
000421 cgggagggca cctcgacccg gcgctcagct ccatggtgtc ctcgccggcg tccaactcga 
000481 cgggcgctct ccacgggatc tcgccgcagc cgcactacgg tggcgggacg ccgctcagct 
000541 cgccccccaa gctcaacctg tccatgatgg ggcagttcca ccactacgcc gcgccgccgc 
000601 aggtgggcgg cggcggaggc ggaggcgggg gcctgccaat cctcgagaac ctgatgccca 
000661 tgggccacct cgaccagttc ctcgccgacc ctggcttcgc cgagcgcgcc gcgaggctct 
000721 ccggcttcga cgcccgcggc ggcggcggag gaggaggcta cggcggcgcc ggcccggcgc 
000781 aattcggcct ccctgacgcc ggcgcggccg gcgcatcgaa ggagatggag ctcgggaaca 
000841 cccgggacga gtcgtcggtg tctgatccgg cgcccggcgg cgccgagatt ccgcccaagg 
000901 gggcttccga cggcaatgca cggaagcgga aggcctccgg gaagggcaaa ggcaaggaca 
000961 gccccatgtc cacctccgcc gccaaggtac gcgccgaatt ccgctcgcca tggccgcgcc 
001021 gcaccattct tggaccgaaa gatttcatct ctcgagcgtt ctgcaggagg attccagcgg 
001081 caagcgttgc aaatcgacgg aggagagcaa tgcggccgcc gaggagaatt ccggcaaggg 
001141 gaaggccgcg cagagcaaca gcgagaatgg cggcggcaag aagcaaggga aggacagctc 
001201 gtcgaagccc cccgagccgc ccaaggacta catccatgtc cgcgcccggc gcggcgaggc 
001261 gacggacagc cacagcctcg ccgagagggt acacacacaa aattcttgca gctctagctt 
001321 ccattgctct tctgatcatc atcttccctg tgcattaaca tgctgtgtgt atctcctctt 
001381 gttcgatcaa ttcaggtgag aagagagaag ataagccaga ggatgaagct gctgcaggat 
001441 ctcgtgccgg gttgtaacaa ggtaactgaa gaaaagcact catcatttgc atcatcgccc 
001501 acctgtttgt tacttgagtt gctcggtgtg ctcagattgg aaactgggaa atgcttactt 
001561 gtttcaggtg gttggaaagg ctgtcatgct cgatgaaatc ataaactatg tgcagtcgtt 
001621 gcaacggcaa gtcgaggtat ttgtccagtg tcaaattcac agatgcagaa tgattgtgaa 
001681 actgcagctt ttgccgattt agagcgcagc aagcgcgggc gtgcgccatc tgaacctttg 
001741 cctttcacat ccattttgca gtttttgtcc atgaagttgg ccactgtgaa tccccagctg 
001801 gacttcaaca atttgcctaa cctccttgct aaagatgtga gggcaagctt atgcgatctc 
001861 attactacat ttgtttcctc tcttattgtg ccaatcatac agttcccaac ttacctcgtg 
001921 tttccgattt tctccctgat cagatgcacc agtcatgcag cccgttacag agctcacatt 
001981 ttccactaga gacctcaggt gcgccgctgc cctacattaa ccagcctcag caagggaacc 
002041 ctctcggttg tggcctgacg aacggcatgg acaaccaggg ttctatgcac ccattggacc 
002101 cggcattttg ccggccaatg ggctcgcacc atcctttcct caatggggtt agcgatgcgg 
002161 cttctcaggt aaaaatgcac accaatgtct cgatctcaca aaatgttcga atgaatcgat 
002221 gctgaatatg aggaatgaat gctttacagg ttggtgcttt ctggcaagat gatctccaaa 
002281 gtgttgttca gatggatatg gggcaaagtc aggagatcgc cacctcttcc aatagctaca 
002341 atggtaggca agtttcctca tcctattacc tgatgccata gttaacgtca ccttaactga 
002401 attctgatgt gtaaactgct atggatcagg atcgttgcaa acagtccaca tgaaaatgga 
002461 gctttgacat gaccaaataa aggttcgatc caaagctctg acgcccattg tacatacaga 
002521 gaagtcagct tgccgcggca gcactctgag attcaaccct aacaatgttg ggccctagca 
002581 gtgttttagc ttctaatttc ccatcttggt gtaatgattc tttgaacaaa aatgaaacgc 
002641 accatgtacg gtagtcgggt gtagtatata tatgtatgct acaagatcgt acataagtcg 
002701 ggtgcagtat atgatgcttc attcagaccc ttttaccctc tcaagcagag agggacgacg 
002761 tgtaatatca ttatttgtat tctcattata tttgtagctg atatatatct ttaagatcct 
002821 tcttcctgtc c

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
BJ464553 bags34o22 475 view details
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ856183 whsctal35l18 716
more... (Total Hit Count: 3 )
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