cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK120101     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os07g0667300 ( IRGSP 1.0 )
RAP - Chromosome No. 7
RAP - Location, Length 28,845,037 -  28,848,001  ( - );   2,965(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 28,845,037 -  28,845,447 ( - );   411 (bp)
Exon 2 Location 28,845,754 -  28,846,058 ( - );   305 (bp)
Exon 3 Location 28,846,658 -  28,846,855 ( - );   198 (bp)
Exon 4 Location 28,847,369 -  28,848,001 ( - );   633 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os07g0667300 Os07t0667300-01 J013022K23 214820 J013022K23 20454 LOC_Os07g47140.1 AK120101 1848 AP008213.2 255677434 BAF22488.1 113612110 NC_008400.2 297607852 NM_001067109.1 115473950 NP_001060574.1 115473951


Chromosome: 7 ,  position: 28,845,037 - 28,848,001 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 atctccatct ccatctccat ctccatctcc tcccgatcga gctgtagtac acgtgaagct 
000061 tttcttgatt cgggtgtatc catggcgcgg gatgacgacc cggccaagaa attagctgtg 
000121 gatggcggcg tcgcggcggc ggcgcggtgc tgtgacttct gcggcggctt gccggcggtg 
000181 gtgtactgcc gcgccgactc ggcgaggctg tgcctgccgt gcgaccgcca cgtccacgcc 
000241 gccaacacgg tgtccacgcg ccacgcccgt gcgccgctct gctccgcctg ccgcgccgcg 
000301 cccgccgccg ccttccaccg cggcgacggc ttcctctgct ccagctgcga cttcgacgag 
000361 aggctccgcc gcggcagcat cggcggcggc ggtgacgagc tgccgctcga cgaccgcgcc 
000421 gccgtggaag ggtacacggg ttgcccgtcg atcggggagc tcgcggcgat cctcggtgtc 
000481 gtcggcggcg attccgacaa gccggccgac gacggctggt ggtccgcgag ctgggaggag 
000541 gaggcgccac aggtgctgag cctggatgac atcatcgtgc cgaccacctc ctgccatggc 
000601 ctccgacctc tcctcacacc accctcccct gaggtaggta gcaatagtgc ttttactgtt 
000661 caccatcaag attccctctc ttattttaat tttaatgcat gataacaccg ttgattttta 
000721 accactcatc ttatttaaaa gaattattaa aaagtcattt attttgttgt gacttgtctc 
000781 atcatcaaat aaactactcc ctctatttca aaatgtttga cgccgttaac tttttagtac 
000841 gtgtttgacc attcgtctta ttcaaaaaat ttaagtaatt atttattttt ttttcatatc 
000901 atttaattca ttgttaaata tactttcatg tatacatata gttttacata tttcacaaat 
000961 tttttttgaa taagacgaac ggtcaaacat gtgctaaaaa gtcaacggta tcaaacattt 
001021 taaaacggag ggagtataat cttaacttat acttaaatgt tatgtgaaaa aacaatggca 
001081 tcatacataa agaaaacgga tgtagtattt tgtcatttgt ctgaccttaa tcgtgtggtg 
001141 caaaagaatc agagttcgcc ggacaacggg gagctggacg gcgaggttgt ccggcagcta 
001201 ggggagcttg ccaggtcaga ggcggcggcg caggccacct ttgtagccgg cgatcagctg 
001261 gcttcatggg catcaccgga gttcacttct gggcatggtg attttggcat tgaggcagca 
001321 agcactacag taccttcttg tgaggtttga ttctgtcact tgacaaaaat tactatgctt 
001381 ttgatgttct tgttcttgaa ttcaatgtgt aaacgacaag agtatggcaa aatcatgcgt 
001441 gatttggctt ttgcttccaa attgtagtat caatttaata aaaaaaaaag attatgcaaa 
001501 aagcagtagc caaaaactct ggatttggga atgtgtcaaa tggtaaatta gcttacaagc 
001561 ccttggagat ttcgtatgta aaaacatcaa acatgattcc aaactttttc gacaaagtta 
001621 gcatgcatgt atgggcatag tattagtaaa tgccaacaaa atgatatgca ttggaatatc 
001681 atattcatac caatagagac accgagacta ttcaatcaat gatattctat ttgaaacata 
001741 tcgtcctggt agtgatattt atatgcagtg ttaaatgcga cctttgtaat tcaatcccaa 
001801 aaattaaaat ccctttcaat agagtgtcac atgtccacat gtatgggcat tttaataaat 
001861 ccatgttcat tattagcact ccttaacccg ggttaaaaac cacaatattc tgtctttctc 
001921 atcctgattt taatttgtca cagaatgaaa catggatcat gtcaaccgat tgcactgacc 
001981 ctaccgatgc aagcaagacg gacatcgcac gcgaggaggc tccagcaagc tcatctgccg 
002041 agccatgcct ctcttcgctc gtcgagattt cagagatttg ccgcagcatg agctacagcg 
002101 gcagtggcat cgacaatggc ggccatgatc catcaaccct ggcaataatg ccaacgcaag 
002161 ctctgcccaa gaagggagtc tatgacatcg cctaccctga caggggcacg gtgatttcgc 
002221 gctacaagga gaagaggaag aacagaaggt gaagcgaatt ctactgaata ttttttcctc 
002281 cttttagata atggattaaa aacccggcct ctacatccag cacagccaac caagttcata 
002341 catgagcact gaagctccac cctttacatg gttaacaaaa acaaaataac ttggaacaca 
002401 aaaggtgtca agaacaacca acaaaacagt aaaaccacca tccaggcaca ccacatcaaa 
002461 cagacacggg aattctactg aatttttttt tcctcctagc ttgaaggaga tgcattcatt 
002521 gatccatgtt cttgtgttgc cctgaaaatc gcagattcga caagcagatc cggtacgaat 
002581 cgcgcaaggc tcgtgccgat ggcagattga ggatcaaggg acgcttcgcg aagtcgaact 
002641 aggcatgatg atttcttggt cggcttatca gtttcagttt ctagcatggg caagagggac 
002701 cctgctatac aattcctcta tttgcatgat gttattattg atgtgtcggc agcatatgat 
002761 ttccttgcgt tttcttttcc cagctttgtt tgtgtggtag cattgttcag tagaagtaat 
002821 aactacattt gaggagagtt gatccaaatc caactcttct gtctcgttgt agaaaaggtt 
002881 cagtgctaga tgtttgttgt gttgccatga tgttgctttg ttccaattct gatttaagac 
002941 tcctactggt tattgcagaa aggtt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs  
Acc. No. Clone Name Length
BY862093 rbaet41d10 414 view details
/rice/oryzabase