cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK112118     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os07g0606600 ( IRGSP 1.0 )
RAP - Chromosome No. 7
RAP - Location, Length 25,581,224 -  25,582,155  ( - );   932(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 25,581,224 -  25,582,155 ( - );   932 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os07g0606600 Os07t0606600-01 002139C11 110973 002139C11 2829 LOC_Os07g41580.1 AK112118 39325 AP008213.2 255677434 BAF22144.1 113611766 NC_008400.2 297607852 NM_001066765.1 115473262 NP_001060230.1 115473263


Chromosome: 7 ,  position: 25,581,224 - 25,582,155 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 cccgcgccct cctctcctct tcgtcttcct cctcgcttcg cttcgactgc ttcgatcgag 
000061 gagatcgagg ttgcgatgcc ggattcggac aacgagtcag gggggccgag caacgcgggg 
000121 gagtacgcgt cggcgaggga gcaggacagg ttcctgccga tcgcgaacgt gagcaggatc 
000181 atgaagaggg cgctcccggc gaacgccaag atcagcaagg acgccaagga gacggtgcag 
000241 gagtgcgtct cggagttcat ctccttcatc accggcgagg cctccgacaa gtgccagcgg 
000301 gagaagcgca agaccatcaa cggcgacgac ctcctctggg cgatgaccac gctcggcttc 
000361 gaggactaca tcgacccgct caagctctac ctccacaagt tccgcgagct cgagggcgag 
000421 aaggccatcg gcgccgccgg cagcggcggc ggtggcgccg cctcctccgg cggctccggc 
000481 tccggctccg gctcgcacca ccaccaggat gcttcccgga acaatggcgg atacggcatg 
000541 tacggcggcg gcggcggcat gatcatgatg atgggacagc ctatgtacgg ctcgccgccg 
000601 gcgtcgtcag ctgggtacgc gcagccgccg ccgccccacc accaccacca ccagatggtg 
000661 atgggaggga aaggtgcgta tggccatggc ggcggcggcg gcggcgggcc ctccccgtcg 
000721 tcgggatacg gccggcaaga caggctatga gcttgctttc ttggttggtg ttttggtaat 
000781 taattaatca gaggacatgt cgggttaatt aatcttaatc tctgtttttt cactcttttt 
000841 ttttaccttt ctttctctct cttttatctt tccttttctc aatgtgctaa aatgagtcaa 
000901 ttatatggct aaattctcta ctaattcgct tc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ482187 bah63o02 524
more... (Total Hit Count: 4 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ248969 whf8n09 645
more... (Total Hit Count: 33 )
/rice/oryzabase