Update info.cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK111802 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os07g0157401 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 7 |
| RAP - Location, Length | 3,099,437 - 3,101,822 ( + ) ; 2,386(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 3,099,437 - 3,100,927 ( + ) ; 1,491 (bp) |
| Exon 2 | Location | 3,101,070 - 3,101,822 ( + ) ; 753 (bp) |
| Related Rice IDs | ||||||||
|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | RAP Annotated Accession No |
KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXPro FeatureNum |
| Os07g0155600 | Os07t0155600-01 | 207853 | J013072G02 | 10443 | LOC_Os07g06130.1 | AK111802 | 15715 | |
| Os07g0155600 | Os07t0155600-01 | 207853 | J013072G02 | 10443 | LOC_Os07g06130.2 | AK111802 | 15715 | |
| Os07g0155600 | Os07t0155600-01 | 207853 | J013072G02 | 10443 | LOC_Os07g06130.3 | AK111802 | 15715 | |
| Os07g0156732 | Os07t0156732-01 | 207853 | J013072G02 | 10443 | LOC_Os07g06190.1 | AK111802 | ||
| Os07g0157401 | Os07t0157401-01 | J013072G02 | 207853 | J013072G02 | 10443 | LOC_Os07g06300.1 | AK111802 | |
Chromosome: 7 , position: 3,099,437 - 3,101,822 bp |
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| Sequence (Data source : RAP-DB) | |
|---|---|
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Nucleotide
Fasta Format |
000001 aggcaactag cagccatact tgatgagttc tgggggcatc tctttgatta ccatgggaaa 000061 ctcactcaag aagctagctc taaaaggttt gacatcttgc ttgggctaga cgtaagaaca 000121 cctagctcaa ctgtaagagc agacagtcaa gctaatgaaa tcccgaagag tcccatggta 000181 cgagacaatt tacaagggtc tgccttcttg ggaagttcaa gggatctgat gtctactaag 000241 aatgagatgt cgaatttgga tctgacatat gggcttcaga tgggcaataa cattgggtca 000301 tcagcctggt ctcagggcat gcagttacca agtacccaac tgcagagttc aagcaacagc 000361 ttactcgatc aaggtgcaag attaaattca aattttagca cgccatcata cgcagacaac 000421 aaccaattct accaacctgc aacgattcat gggtatcagc tcgcatcata cctaaaacag 000481 atgaatgcta atcgaaatcc ttactctagc atgccattgg acccacagcg acttccaaaa 000541 tcttctgcat cggctgtgcc aacctatgtc gattctgtca tgcatgctcg taaccagaac 000601 ttgcttgctt cattgggagc tactccttca cagatcgcag caacatcccg gataggtact 000661 atgatggcag aaagatccta ttatgtccct tccactcttg acgggaatga aaatgctggt 000721 tcatcagctt actcaaagaa gtaccacagc tcaccagaca tatctgcact gattgctgca 000781 agcaggagtg ctctgttgaa tgaatcaaag ttgggtggtg gtaccattgg atcccagtcg 000841 taccttagca ggcttgcatc ggaaagatct cagtatacaa actcggtggc caggcctgca 000901 gctcccttgg cgtttgatga gctctctcca cctaagctcc caggggatat cttctcaatg 000961 caacaaagcc caaacccaag tgcaagatcc ctttgggcta agcaaccttt tgagcagctg 001021 tttggtgtgt cgagtgcgga gctcactaaa agcgagttca accctgcagg cagatcgggt 001081 ggcatgacca aggatgattt ctcttacaag gagtctgagg cgaagcttct tcagtctctt 001141 agattctgca tctcgaagct cctgaagcta gaaggatcag ggtggctgtt caagcaaaat 001201 ggtggcagcg acgaagatct gattgatcaa gttgctgcgg tagagaagct attgcaacaa 001261 ggaaccagtg acaaccaact gctgcttggt gatactcagc aaccaccatg tgataaggca 001321 gacatccagt acatgcgcgt actgcctaac tgcggagacg actgcatctg gcgcgcctcc 001381 ctcgttgtca gcttcggtgt ctggtgcatc cgccgggtgc tagacctgtc tctggtggaa 001441 agcaggccag aactttgggg caagtatacc tatgttctca accgtcttca ggtgagctat 001501 ttcagtcctg aactagtctg aatttgagtg ttgtttttca gtgcccaaga cttgactgca 001561 aacctgaaac tgctcatttt caacgtacaa gactaactct gtcaatcatt tttttcgctc 001621 aaatgtaatg cagggcatcc tggatcctgc attctccaag cctcggagtg ctctcagcgc 001681 gtgtgcgtgc cttcacagag atatccgggt gctcaacagc ctgcgccaca gtagcctggt 001741 agcaacaaac tccattccaa ggcaaatccg aggttccttc accaccgcat ctgtggtcct 001801 ggagatgatc aaggatgtgg agaccgcagt ctcagggcgc aagggcagga gtggcaccgc 001861 agctggggat gtcgccttcc ccaaggggaa ggagaacctg gcctccgtgc tgaagcgata 001921 caagcggagg ctctcgagca agggacaaca ataataaggc atctgggcag cgtgatcctg 001981 tcgcgtttta gggggacttt gaccattgtt cttcaaggat ggcagccagc catggtggct 002041 tgccctccct gagccctgga ttttttcgtt gcacaacgtt tgcagggacc tgaggaattg 002101 gccaacactt ctggtccctt ccatcatatt tcgttttttt ttgtttcttt cttgtttttt 002161 tttttttttt tgcatgtgat gtgttgtata atggtaactg ttcatgtgcc agaagaacaa 002221 ccaccaaaat gtacaacaga tgtagtcagc tgatgcacca ttgtaaagtt tagtctctgc 002281 attttaacct tttttttggg ggtcattgac aaactgaatg aatgccctgt gtaatctctc 002341 ttcagagagg atgccaagac tgagaaaaag cttttgccag atttcc |
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| CJ520927 | rwhcs1e09 | 721 |
| more... (Total Hit Count: 2 ) | ||
