cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK111621     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os07g0606600 ( IRGSP 1.0 )
RAP - Chromosome No. 7
RAP - Location, Length 25,581,223 -  25,582,152  ( - );   930(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 25,581,223 -  25,582,152 ( - );   930 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os07g0606600 Os07t0606600-02 J013109P12 203053 J013109P12 2829 LOC_Os07g41580.1 AK111621 27134 AK111621.1 37988284 BAG99337.1 215767109 NC_008400.2 297607852 NM_001066765.1 115473262 NP_001060230.1 115473263


Chromosome: 7 ,  position: 25,581,223 - 25,582,152 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 gcgccctcct ctcctcttcg tcttcctcct cgcttcgctt cgactgcttc gatcgaggag 
000061 atcgaggttg cgatgccgga ttcggacaac gagtcagggg ggccgagcaa cgcgggggag 
000121 tacgcgtcgg cgagggagca ggacaggttc ctgccgatcg cgaacgtgag caggatcatg 
000181 aagagggcgc tcccggcgaa cgccaagatc agcaaggacg ccaaggagac ggtgcaggag 
000241 tgcgtctcgg agttcatctc cttcatcacc ggcgaggcct ccgacaagtg ccagcgggag 
000301 aagcgcaaga ccatcaacgg cgacgacctc ctctgggcga tgaccacgct cggcttcgag 
000361 gactacatcg acccgctcaa gctctacctc cacaagttcc gcgagctcga gggcgagaag 
000421 gccatcggcg ccgccggcag cggcggcggt ggcgccgcct cctccggcgg ctccggctcc 
000481 ggctccggct cgcaccacca ccaggatgct tcccggaaca atggcggata cggcatgtac 
000541 ggcggcggcg gcggcatgat catgatgatg ggacagccta tgtacggctc gccgccggcg 
000601 tcgtcagctg ggtacgcgca gccgccgccg ccccaccacc accaccacca gatggtgatg 
000661 ggagggaaag gtgcgtatgg ccatggcggc ggcggcggcg gcgggccctc cccgtcgtcg 
000721 ggatacggcc ggcaagacag gctatgagct tgctttcttg gttggtgttt tggtaattaa 
000781 ttaatcagag gacatgtcgg gttaattaat cttaatctct gttttttcac tctttttttt 
000841 tacctttctt tctctctctt ttatctttcc ttttctcaat gtgctaaaat gagtcaatta 
000901 tatggctaaa ttctctacta attcgcttcc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ482187 bah63o02 524
more... (Total Hit Count: 4 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ248969 whf8n09 645
more... (Total Hit Count: 33 )
/rice/oryzabase