更新情報cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK072683 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os07g0108900 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 7 |
| RAP - Location, Length | 470352 - 476655 ( - ); 6304(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 470352 - 470721 ( - ); 370 (bp) |
| Exon 2 | Location | 470877 - 471040 ( - ); 164 (bp) |
| Exon 3 | Location | 471552 - 471593 ( - ); 42 (bp) |
| Exon 4 | Location | 471730 - 471771 ( - ); 42 (bp) |
| Exon 5 | Location | 472147 - 472246 ( - ); 100 (bp) |
| Exon 6 | Location | 472396 - 473873 ( - ); 1478 (bp) |
| Exon 7 | Location | 476290 - 476655 ( - ); 366 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXpro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os07g0108900 | Os07t0108900-01 | 208723 | J023140K24 | 10947 | LOC_Os07g01820.1 | AK072683 | 16292 | Q6Q9I2 | MAD15_ORYSJ |
| Os07g0108900 | Os07t0108900-01 | 208723 | J023140K24 | 10947 | LOC_Os07g01820.2 | AK072683 | 16292 | Q6Q9I2 | MAD15_ORYSJ |
| Os07g0108900 | Os07t0108900-01 | 208723 | J023140K24 | 10947 | LOC_Os07g01820.3 | AK072683 | 16292 | Q6Q9I2 | MAD15_ORYSJ |
| Os07g0108900 | Os07t0108900-01 | 208723 | J023140K24 | 10947 | LOC_Os07g01820.4 | AK072683 | 16292 | Q6Q9I2 | MAD15_ORYSJ |
| Os07g0108900 | Os07t0108900-01 | 208723 | J023140K24 | 10947 | LOC_Os07g01820.5 | AK072683 | 16292 | Q6Q9I2 | MAD15_ORYSJ |
| Os07g0108900 | Os07t0108900-01 | 208723 | J023140K24 | 10947 | LOC_Os07g01820.6 | AK072683 | 16292 | Q6Q9I2 | MAD15_ORYSJ |
Chromosome: 7 , position: 470,352 - 476,655 bp |
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| Sequence (Data source : RAP-DB) | |
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Nucleotide
Fasta Format |
000001 actgacaccc gtccccaaaa gcaaagaggc ctctctctct ctctctcgcc gatccctctc 000061 ctcctcctct tcttcttctt ccactagcta gttcgtcttc ctccttcagc tagcttgtag 000121 cagctaaggt taggtcggat cgagatcggg atcggccgcc ggcgagcggc gagcggcgag 000181 gatggggcgg gggaaggtgc agctgaagcg gatagagaac aagatcaaca ggcaggtgac 000241 gttctccaag aggaggaatg gattgctgaa gaaggcgcac gagatctccg tcctctgcga 000301 cgccgaggtc gccgccatcg tcttctcccc caagggcaag ctctacgagt acgccactga 000361 ctccaggtac acctatagcc tgatcgattc cttgccattt ctggagcacc tgagcccgcc 000421 tgagatggat gaactcaata attctcctag ctttttgccg tttctggccg gccgcttcca 000481 tggatttcag ctgctgctct ctgaatttgc catgtttggt ttgtgcatct ggttgcatgt 000541 gtgctacagc tgatgatttt atgcttcact agtgctgcaa cacatgcaac acagtccaat 000601 ccaagctagc tcagctactc caggaggagg agtcagctgc atgcctcctc atttcgggaa 000661 atcatctctc tctctttcta ttttttccct ttcctttctt gtttcccctt tttctttcct 000721 gctagcttgc ttctctctct acaccctgca tacccttttt gggattgatg gccggtttta 000781 attaatttcc cctcctttct ttagttaatt actaccctac tactaattca tctcctcccg 000841 atcctctcaa tttctcatca tatggagtac tactaaaata tatatatgta gtacgcactt 000901 ggtgtggccg gtctttgtta acatcatgtg cttgcttaga ttcaagggga ttatatatat 000961 aagaggatct actactaagt gtactttgtg attacatcag ctatctatgt agctgatgat 001021 cttgctttgg tcttttgctg atccattgag ctagtgctaa ttctcatcac ccttccattt 001081 gatgtactgc aaatagtttt ttattcattc gcttcttctc cctcttcccc atgtgatttg 001141 attgctagct ccttcctgac ttttatttgg gttgatttcg tcacatcttc ctctcaaatt 001201 aatctcatgc gcgtgccttt gttctccacc tgtcaagaaa ttaattaaag aatatatcac 001261 acgaattacg aggagtccac caccagtgtc atgcactcct ccctattgtt cacagtcaca 001321 gctgatgcat gcaaaacatc ttctgtttct caagtaatta attcccctct tcttgtgagg 001381 cttggcttaa aattactcaa acagctgttt ttcttgctta tgcatcatct tcctcagata 001441 ccaaaacgtt ggagatggac agatctggcc tttcctcttc ccttctctct catcctcttc 001501 tatgtttctg cctcttctta tgatgaatct ttatttggta ttattcacgt taagcatctc 001561 tttaaagagc cctagatcaa atttgatcta tctcttttgg tttaacttca tggccagttg 001621 cttgtgtgtt ttggtctaga acgaccacgt acgcgagata tttccttttc tgctcagctg 001681 attaattaat aatgatggga taattcacta attattctgg agttagatca agagatgtac 001741 ttaaacatcc tgtgacacga tgacttcaaa aaataatctt gctctctgta aaatcacata 001801 atagctagcc atcgcgcgtg tttcagaaaa ataatttatc ttgcttgcta gcttttgctc 001861 aaaatgcgtt tctgacgtct aggtaaagag gacttttacg gtcgtctgtg ttgtactgga 001921 acagtgccct gcacactccc cagcgtcaag atcagtctaa ggcgcttcat ttctagctca 001981 gaaatcttca cttatttgat cttaattata gatcttcctg agatagatct aagggtgttc 002041 cagtaaaaca gaagaagtca agttcttcag gatcctcgtg atataattaa actgtagtct 002101 cacaatctta ctgatcatca aggagtctgt aaacacctat acgtacggct ataggattat 002161 ggggaggttg gtctaaaata aaggtgttaa attacttgca attatcaaga tgtgcaaatc 002221 atcacccagt aattcaatgg tgctattata tatagtctgt tttgaacagt tccactggtt 002281 ttgttagggt ccttgctgat ggctgtttaa cggtgctgtt atatataatc ttgattattt 002341 tttttgctaa attttcctaa gcaacccact tcaaattttg gaatgggtga attcttatgt 002401 tcacaccctc atatcacatg tgtcatgagg agcttttttt tcgtcacaca gtcccataca 002461 acgtccctgt tttcttgaag ataagataat tcatgcatgc acttgaatat aaccgagtgt 002521 tttcatgtgc atgcttttta tttggctgtg tcgagtgttt agacagcaaa agagctcttg 002581 tgcatacaaa tgccgatatc tatatattag tagtcttaat ccacatttca gctttaattg 002641 cttggaatag tttggtaggc attcctagct tcagaccatt taaatatact tcctaaacgt 002701 tgtcatgaga atgctgaatg caaagtattt acatatatag tggactaatt tcagattctg 002761 ctcatgatgg ttttccctgc aggatggaca aaatccttga acgttatgag cgctattcat 002821 atgctgaaaa ggctcttatt tcagctgaat ccgagagtga ggtaaaacac agtaggttgt 002881 atgatatata acttttacat gaagggaata ttattgttcc ttttctattg cattagcatt 002941 tcaatcatat catttccttg tggcctttta aatcacatgt taacaaagca gtttttctga 003001 attctatcgt tctacttgcc aaaactagat gttggtaacc ttctgtttta tactttttaa 003061 cttcaaacct cgtgtctttt gcactctggc atatttctta aaatttctac ttattgggat 003121 atcatgcagg agagtcctca ttcccttcat ttaatcccct caaattttat ttattatggt 003181 catacaatta atgggccaca tgcatggaag tcgatcgcca gcttgcgatc agcatcctat 003241 cattaatgtt atgatctata ctaattcttc tgtaaataaa ttaaaattgc actagttttt 003301 aactaaatgc tactattcta tttttttatc catactccgt ttgagtggtt tcttttgtgt 003361 ttcatgaagc aatataatat gcttaagaaa acatagaaac atgcacaata caataatagc 003421 gctggtagaa tccggttgga gaccaaatgt ttcgatattc taagtgcata tttatatata 003481 ctaagtaaaa ctgtaatcat aaacatgcat atggactgtg atcgatgaaa tgtttcttca 003541 tttttttttt caagataact cttccccagt tgacaacatg cactgcatcc agaagtactc 003601 atggtatttg ttttcagtac tgtttgatga gtaaaacttt ggtaagtgtt aaaaaatgat 003661 gataagtgca aatatttgtt cctttaccac ttccaccttc ttggagtaaa gaaaaaaatg 003721 tgtgtggttt ggcaaagttg ttgcatatat cacggcatta gtgtgcggat aatgcgaata 003781 aatgcatcaa taagcactag gagtaagtta attagttctc taccttaatt gaaaagttca 003841 tgtacattta aaaaaattaa acatgcctct ttttatcatt tgttgaattt ctacatttat 003901 caagacagca aaggagttct catctactaa taaattaatt taaggagcta taactccctt 003961 aattttatca aatattcaca tacacggttg catttgagga ttttctatat actccactaa 004021 atgaggatgc atttaggttc tttataatat tttatttcca tcgtttcatc atctgtttat 004081 gtttacagta atttagtaat agttctctaa ttttgacagt aatggttggc tcacagaaaa 004141 catcaaccaa ccatatatat tggtttatac tgacaaagag tttttttttg tacagggaaa 004201 ttggtgccat gaatacagga aacttaaggc aaagattgag accatacaaa aatgtcacaa 004261 gtaatcgata tatatatcca atttctataa taatgttaaa taaatttcga actaattgca 004321 ctaattatta tttttaaacc aatttaaaag agaacttccg gtattgactg ctgaagatga 004381 cgtgaaacta acttatgtat cttgtgtaga cacctcatgg gagaggatct agaatccctg 004441 aatctcaaag aactccaaca gctagagcag cagctggaga gttcattgaa gcacataata 004501 tcaagaaagg tagtattttt ttggatagtg gaatcttttt atttgaactc ccgacctcta 004561 cacaccaaat gtacagaaaa aaaggagcaa attattaaaa gaaacgtagt aatatattta 004621 gcatgttctg tttcaaactg gactgaattg aaataattca tgcatgcgca tgcctgagtt 004681 acataaatat atatccaaat gtcttgttgt cactgctact ttgaaacaaa tgttcttttt 004741 tttttccttt ttgagaaaat atatgagtaa atattttcag cacattctgg aggaacaatt 004801 accaaatata aactttttag cacattctgg agtacaatta ccaaatatga cggactaact 004861 agaacaatat gtttgtgttt gcagagccac cttatgcttg agtccatttc cgagctgcag 004921 aaaaaggtga ccaattgaac tgcactactg tgtatgcatg tatatatgaa tcgtgcatgc 004981 aaaccgttgt tagctagtag ttagttatag tttactcttg gttagtctca actgatagtg 005041 cagttttctt gcatgagtgc aggagaggtc actgcaggag gagaacaagg ctctgcagaa 005101 ggaagtaagt tgtcgaaaat atagtattta ctgctgctta tattaattaa ttcattctgc 005161 ttgactagcc aatggaggca ctaaacataa ttaattcatg cgcattggtt ttgatcaatt 005221 gatttatctt gttgacaatt ttccaatcta tccatgggtt taattactag ttttgtcaat 005281 ggaggcatta gagataatta attcatatgc gcactcgaaa gtttgaaatt gctgtagttt 005341 acttgttggg tggatcatat cgccaataat tttttccccc acagttgacc gcaaatgaga 005401 agtaattttc tttgccttct agacttgacg gctatttttt tagcgtgttg gcaattgaac 005461 atatgacctt gggttaaaac cacacatctt ttatcattgc gctatcaaat acatctcgat 005521 aaatttgtcc cttactagcg gtttatgtgg tttccttggt ggtcggtttg tgcctcttag 005581 aaaaaaatcg tgatgtttgt agtgtgcgca tgcagctggt ggagaggcag aagaatgtga 005641 ggggccagca gcaagtaggg cagtgggacc aaacccaggt ccaggcccag gcccaagccc 005701 aaccccaagc ccagacaagc tcctcctcct cctccatgct gagggatcag caggcacttc 005761 ttccaccaca aaatatctgg tacgtatatg tctgcattca tgtctcatca gttgctattc 005821 agttataaat taatctgtta ctgcactaat taagatcgat cacacccttg ttaagttcta 005881 agtctctaat taattaactg catgtatata attatgcaca tctgtgcata gtagctaccc 005941 gccggtgatg atgggcgaga gaaatgatgc ggcggcggcg gcggcggtgg cggcgcaggg 006001 ccaggtgcaa ctccgcatcg gaggtcttcc gccatggatg ctgagccacc tcaatgctta 006061 agatgatcat cgtcgtcgtc gtcggccaaa cagctgccgt atgcaccgtg aatcatggga 006121 gcaaccttga atgaattgaa gtcattggta tcgatcctag cgataatata tatgattctc 006181 ctaaaatgaa attgatctca aaaaaacaaa cctagcgatt aagctattct tatatatgtg 006241 tttgcctgct gccccctacc ctacaggcta catatgattt gcaagaaatt aattatgagc 006301 aagg |
相同な Wheat 及び Barley の EST データはBLAST 結果の E-value が e-20 以下のものです。
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| AK249833 | FLbaf58g24 | 1273 |
| more... (Total Hit Count: 28 ) | ||
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| BJ213269 | wh21j22 | 658 |
| more... (Total Hit Count: 64 ) | ||
