cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK065454     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os07g0673200 ( IRGSP 1.0 )
RAP - Chromosome No. 7
RAP - Location, Length 29,112,910 -  29,116,724  ( - );   3,815(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 29,112,910 -  29,113,271 ( - );   362 (bp)
Exon 2 Location 29,113,436 -  29,113,494 ( - );   59 (bp)
Exon 3 Location 29,113,603 -  29,113,740 ( - );   138 (bp)
Exon 4 Location 29,113,959 -  29,114,210 ( - );   252 (bp)
Exon 5 Location 29,114,658 -  29,114,902 ( - );   245 (bp)
Exon 6 Location 29,116,088 -  29,116,724 ( - );   637 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI		 UniProt
Accession No		 UniProt Entry
Name
Os07g0673200 Os07t0673200-01 200818 J013024P14 774 LOC_Os07g47590.1 AK065454 40583 AP008213.2 255677434 BAF22520.1 113612142 NC_008400.2 297607852 NM_001067141.1 115474014 NP_001060606.1 115474015 Q7XI73 BAHL2_ORYSJ
Os07g0673200 Os07t0673200-01 200818 J013024P14 774 LOC_Os07g47590.2 AK065454 40583 AP008213.2 255677434 BAF22520.1 113612142 NC_008400.2 297607852 NM_001067141.1 115474014 NP_001060606.1 115474015 Q7XI73 BAHL2_ORYSJ
Os07g0673200 Os07t0673200-01 200818 J013024P14 774 LOC_Os07g47590.3 AK065454 40583 AP008213.2 255677434 BAF22520.1 113612142 NC_008400.2 297607852 NM_001067141.1 115474014 NP_001060606.1 115474015 Q7XI73 BAHL2_ORYSJ


Chromosome: 7 ,  position: 29,112,910 - 29,116,724 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 tcgtttcacc ctgctcggaa aaaaaatcct aaaagcttaa tttctttctt tgttcttatt 
000061 actgtctcac gtgagacgcc tgagctcaac tgaatttctg gccccctctt catctccgtg 
000121 agcttcgctg ccctttttct ttgccttctc ttggtggttt aatttcatca gttttcctcc 
000181 atttccttct ttagccattg ttccgattgc cgtctcttgt tgcatgtgca ttccttctct 
000241 gaaccgtgcc cccccaattc gtccgcgagc tatacaaatt tggattcgtt ttgttcgttt 
000301 ccagctcacc ctgtaaatcg tttctcaagt cattcaggca tactcacatc gcacaaacat 
000361 atatataccc caagattttg aatccatcaa tttgcagacg ccataggcgt acaagttatc 
000421 cattcaagcg ctccaaaaat ttgccaagaa gtttgcctta aatttggatt catgaagttt 
000481 gccaagaagt acgagaagta catgaagggg atggatgagg agctcccggg cgtggggctg 
000541 aagcggctca agaaattgct caagaaatgc cgctctgacc tccaatccca cgagaacgac 
000601 ggctcctccg ccggccgctg ccccggccat tgctctggtg aataaagcta ctataccttt 
000661 caatttcctc ctatatggtc tctttgatgc gtaggactat tcttgattct cttacactga 
000721 aaataatgct gttttttcaa aagaaacctg ttggtttctt gttttcaatg aaaacgagga 
000781 ttaatgggcg ggctcatgcc ttttggtact ttttttttct tttggttaaa aaaggacaaa 
000841 cccttggcaa aatggcatac ctagaaaagg attagaattt aggacttgtt gcaacttgca 
000901 agaggcaatt gttttttttt tcagtttttt tagtttcatc gtgctgagaa gtgagaagaa 
000961 ctagttgata attctgcggg aacagaggaa cctgtaggct gtacacagcg gttttggtat 
001021 tcggcaagtt gaactcttcc tgggaatgcc aacctatttt ctcttattta tcctttagat 
001081 atatgtatcc taccttgttc tcgctgtact tcttttattt atagtgtcaa acaattacag 
001141 cttcgcatgg aagagaagct ttactgcaga gaaagcaaca atttgacttc ttagcacaat 
001201 tctttcgaag cattttctct gtcgcccctt gtatggttaa gattggattt taaaatggcg 
001261 ataatgtttt gtttgctttc aaacatcaat accaacaaat taagttgatc ggtcgggtat 
001321 ttggaaaatc tgcatatact actgtcgtgt ggacggcaga tttataacat aacttcaaat 
001381 tgaacactac tagagatagc ccattgactg ccccattata atagtgcaag tcattgtcaa 
001441 ggtggtaatt gtttgtcaat gacaaccacg taatttttca agtgccaaga tactataggc 
001501 cgtagtaacc atggaaaagg ggatgtcaac catcacaaag tccactctta attttgtatt 
001561 cattagcagg ggcttattca tctgtccttt tgaataactt tcgattattt tagttagtgt 
001621 cgacttgtct actataattt gggatggttt tgatataaat atttcagagt cctaaaagag 
001681 tcgattattc ctggttcttt catattgata ttgtaactac tgcggtttgc ctagaaaaga 
001741 atattagagt cgccatgatg gttatttttg tctaccttac ctttcatggt tggttatctg 
001801 acaaattcct atcaacatgc agtatgtgat gggagttttt tcccatctct tctcaatgag 
001861 atgtcagccg ttattggctg cttcaatgaa aaggccaaga agcttctcga gttgcacctg 
001921 gcatcaggtt tcaagaaata tacaatgtgg ttcaccagca agggtcacaa gagccatggg 
001981 gcattgatac agcaaggcaa agacttggtt acttatgcaa ttataaatgc cgtggccatg 
002041 aggaaaattt taaagaaata tgacaaggca tggccttaaa ctttaatctt tgcacctctc 
002101 tttatctctt aaaggcatta gaaacattta aagcttacta aggacaaagg gggaatattt 
002161 ttttttggaa accgaacgaa gggggaagat aactatataa gtattccatt atttgagaga 
002221 ggaacacaaa aatttcacac acttttagtt ataagcatgt gagtttggtg aagcccaaaa 
002281 tgctagtcta tataggtgtc aatgggtcat atactcatat ggtatcttcg aggatatata 
002341 tacacacaca cacagaggat gattgagttg tatttatata tttaatcttt ctagtgacta 
002401 tttttgttag aattaacgta tctatcattg ttcttgtctt tggatttaag acggtcctca 
002461 atggttatat taataattat gtaagactat taactaaaag cctctctttt ccagatacat 
002521 tactcgaagc aagggcagga attcaaagct caagcccaga gtctgcatat tgaaatactt 
002581 caatccccat ggctctgtga gctgatggct ttctacatga acttgagaag aagcaagaag 
002641 aacaacggtg ctatggagct ctttggggat tgttctctcg tattcgatga tgacaaacca 
002701 acaatttcat gcaacctctt tgactctatg cgtgtcgaca ttagcttgac atgttcgatt 
002761 tgcttggtga gtttgcactt gtcgactgca ccaagatctt aatttaccta acaaggatat 
002821 cattaataca ctaaattttt tatgttatga agtatgaatt cgtacttagg ttatattctc 
002881 cttgttataa tgtgctcaag tatcaacttt gttccttgtt actgcgaaat tcatagcact 
002941 tccttattgc attgtaaatt tctgaaattc acttgctttt gcaggatacc gtgtttgatc 
003001 cagttgctct ttcctgtggt cacatatatt gctacttgtg cagctgttct gctgcatccg 
003061 ttacgatcgt tgatgggctg aagtctgccg agcgcaaatc aaagtgccca ctgtgccgac 
003121 aggtataaac aattccttca attcgatctt tgttttagat aacattcctt caaatttgat 
003181 gaccatatgc ttgtgcatgt cccatcaact gacctgattt ctcatttcag gcaggagtct 
003241 ttcctaatgc tgtacacttg gatgagctga acatgctact aagctatagg taagtctgaa 
003301 ctgctcagga tcatatcatc agtcatctgc acggccgtac aaatgtacac ttttttttat 
003361 gtcatgaaca tagattatca ccatatttcg tttatcgcaa aaggacaagg attgttacca 
003421 agttgaaatt taatatggat catctattga cagttgtcca gagtactggg agaagagaat 
003481 acagatggag cgggttgaac gtgttcgtct ggctaaggaa cactgggagt cacagtgcag 
003541 ggcattcttg ggcatgtgat tctaaagttg gtggattttt tttttcttta gaggggcttc 
003601 atatgtgatg tatagtttct tgacaaaatg gaatttgcca tttgttgtca cttatatcct 
003661 gctctgttgc tcctctttgt gtaagaagtt ggatttgtca tcctaaatgc aaaaacagca 
003721 ggggttgttc actactgtgc acttagatgt aaatagggta gatttgtagt cattgttcaa 
003781 gtgcataact gtaaattcat ttatatttga tcagt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs  
Acc. No. Clone Name Length
CJ842091 whatlal28n02 429 view details
/rice/oryzabase