cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK064566     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os07g0203700 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 7
RAP - Location, Length 5,599,866 -  5,607,846  ( - );   7,981(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 5,599,866 -  5,600,374 ( - );   509 (bp)
Exon 2 Location 5,600,455 -  5,600,563 ( - );   109 (bp)
Exon 3 Location 5,601,075 -  5,601,196 ( - );   122 (bp)
Exon 4 Location 5,602,859 -  5,602,935 ( - );   77 (bp)
Exon 5 Location 5,603,349 -  5,603,487 ( - );   139 (bp)
Exon 6 Location 5,603,586 -  5,603,741 ( - );   156 (bp)
Exon 7 Location 5,604,306 -  5,604,618 ( - );   313 (bp)
Exon 8 Location 5,605,084 -  5,605,394 ( - );   311 (bp)
Exon 9 Location 5,607,245 -  5,607,846 ( - );   602 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
Os07g0203700 Os07t0203700-01 002112D04 107630 002112D04 13105 LOC_Os07g10390.1 AK064566 30410 AP008213.2 255677434 BAF21054.1 113610676 NC_008400.2 297607852 NM_001065675.1 115471082 NP_001059140.1 115471083


Chromosome: 7 ,  position: 5,599,866 - 5,607,846 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 ggagacttga taattcatct tctagttgtg caacgagtgg tgattttcgg aaagattttg 
000061 cagctaatat tcgcaagttt gctgtaattg gaactcacga accttctgtg catatcattt 
000121 cgttggaacc tggagaagca tttcagcaac ttgctgttgg gcatatatca gtaaacaacg 
000181 cgctcggcac tcctatcagt ggttgtatac ctgaaaatgt taggtttgta gcagctgcaa 
000241 ggttctacat tcttgcagga ctaaggaatg gaatgctact gaggtttgag tcacaaacaa 
000301 gcaaagggca ttgtttccct ggttcctttt acaaggagtc ctctacccct tgtgatgata 
000361 catcccttat gttgattgct gtacggcgta ttggaatcac tcctgtagtt ttggtaccgt 
000421 tgcatgacag agccaatgct gacattattg ttctcggtga taggccttgg ctattgcaat 
000481 ctgctagaca cagcttggca tattcatcca tctcatttct gcctgcttcc catgtgacac 
000541 cagtgtcttc tactgattgc cccagtggtc tgctgtttgt ttcggagaac tgtttgcatt 
000601 tggtaagttt ctaggactcg tgaaagtgaa atccacaagc aaaacatgca catattcttt 
000661 tttagggatc aagaataatt acattattgc ttgcatttca tgctctgaat tattaggact 
000721 cataaaccat gagattgcta aaatctggga tcgaatccca ttataatgag ttctccaaat 
000781 agatagtcag gaacatagaa atcatggctg ttgattgtta tcttataatt ttctttatgc 
000841 actcggtgaa accgtattct ctcttctggc atcaaaattt cacacttctc ttttttgctg 
000901 ctatttcttt agtatccgtt tctcttttgc cactatcgtt ggtcaacatc cgttgaccat 
000961 cacatttgcc aataaaaaac tgttgtaccc ttgcgaaact aacaaaatat aagaaattca 
001021 aactatctag gaaaatacaa tttacctttt tagtttttaa aggttgtaca aataattatg 
001081 gtaggaaaat tttcagttag tttaaaaggt tcccacgtgt atcttaaaaa tggaattttt 
001141 aaaggaaata tttttgcata tccacataca aatcaaacag catagctacc aatattcatg 
001201 taaacaacca tgcacataat tccttagtat agattattct gtgaaacatt tgagaaccaa 
001261 atcattccca tgctacattt ttaaagatta atattagtga taatataatt cccaatttta 
001321 tgtttttcta aaaaagtgta ttaagtggcc ataatttagt tttcttgata actttatggt 
001381 ataggttaaa atgtcaagtg ctgcattatt ttggaacatg tacaggggta taatggcctt 
001441 ttaggggcta acttaacagt caatggatgt tgactagacg gtaatgatga aacaaaaatt 
001501 tgctctgaca gaatagtggc aaaagagaga agtgcagatt ttcgatggcg gaagagagaa 
001561 cacagttgca atgagtgaca aaaagaaaaa aaatcccttg ttttattata catagaacta 
001621 atttgattcg tgacatcgaa atggtactca cagattttcc atccatggtt tctctcatat 
001681 cattgtattt gagattttct ttttgctagc atataatttt tgaaaactac tccctctgtc 
001741 ccataataag ttcatttttg gtttcttcta ttttccccaa aacaagttca tttttgaaga 
001801 atcattgcag agtttgtgga agtaaggaat gattatttgg gagaagataa agtgaggaat 
001861 agttgcattg cgatatgata aagtagggat attctagttg tatatgtgtg ggatgggtga 
001921 aaaatgaact tatttaggga cggaaggagt aactaggtaa tgtcatgtac cttgtagttt 
001981 tctctaatgg ggcattttac cagaggggtg gcaatgtagc agagagtgtg tcaccatgtc 
002041 aagtaaaaaa ccctcccatt ctgtattcta ttttccccat ggccaaaggg actttagtcc 
002101 ttttcttgtt cgtctgaaac atgaaatctc ttaatcgtag tcatcctgtt ttagcctttc 
002161 cctgttaagt ttatgtgctt atatttcaag tagatttctt ttgttccagt cccttctgtt 
002221 gatctgccat aagtatggtg caattactag gataatttat tctaaaatac caagatgata 
002281 ataaaatcat gaccttgtgg gtattgttga aacttgaaag caatgcttat attattctct 
002341 cactattggt atgcatgtat gtgttctcac atagtcacat gtttatctcc taaaagtggc 
002401 ttgcatgtgc atttcattgt actgtcagtt taaatcaagt ttatcttttc aggttgaaat 
002461 ggttcatggc aaaagactaa atgcacagaa gttttcgatt ggagggactc caaggaaagt 
002521 gttataccac agtgatagta gaacactgtt ggtgctgaga actgggttaa ccagtgtatc 
002581 ctgttcttca gatattgttc aaatagatcc aagtaatggg gcattgcttt ccagattcaa 
002641 gtgcgaacct ggtgaaacag caaaatgcat gcaaattgca aagataggga atgatcaagt 
002701 attaatcgtt ggaactagta agtccaatgg ccgaccaatg atgccaaacg gtgaagcaga 
002761 aaggtaagga cgacaactca tgttttgttt ctgctgaacc ttgttttgtc aagtttgaag 
002821 tgtccatggt cccttagaat ttttgcacta ctaatgttta acttgcaatc ctagtgtttt 
002881 ttttttgctt ggtttgagta taattattaa tattaatgat ctgttgtttt ggtctccact 
002941 tttttgtttt ctgtctgccc gttgtctggt attctgcaaa agtgacatgg gtatgaattt 
003001 gcaaagcttg caaccatgag gcacattttt tggtttctca ctgattgtga cggtgttgcc 
003061 attgcgctat tgatcattca atgcatattt gcagttggat catcaatatt tttttcttgt 
003121 tttttctgca cttaatttag tttttccatt tccatatctt tgaattgtgt gtatagttaa 
003181 aagctgcctt tatattgtta ttataactat tctctttgga tgaaacagta tcaagggtcg 
003241 tctaattctt ttaagcttgg agactattga aagtcctcgt gagagcggtt cgtttactgc 
003301 agcttctaat ttgaattcat ctcatgctgg ttctccattc ccggaatttg ttggatatgc 
003361 agcagaggag ctgtctagta acagcatgtg cagcagtcct gatgaagttt gctgcaatca 
003421 aattcaacct gaactcatgg caggccattt gagatcacta gtccaacata cattcaatgg 
003481 cgctgttctt gctgtacatc catatctaga tagatatgtg ttggcagcag ctggaaatgt 
003541 ggtatgatta gaagtcaatt tttatcatat atgatagtat atctattaaa gagtagctta 
003601 gctcggtaat ggatctagat aaataaattt gcaaagaagc ttgaatgctt gattggcaag 
003661 ttccggactc ttgacatcag aatcagttaa tcaacattta tcctggcaaa taacactatt 
003721 tatgtggatc gtatggtgtt ggcttctttc acttctatag attgctagaa caacagaacg 
003781 aaggtgcatt agcactttag catatgagcc acattaatag cagaggattt ttttttgtaa 
003841 taactactgg agagatagac tagtgacgat tggagttgag gagatggaga ttggaagggt 
003901 tatttgccat tataaaaaaa atcctgaaag aatatcccaa caagagtgtt attattttcc 
003961 aaaacaaaca gttatcatga cgtcactaaa ttttctatca ttctgttact atctggtgct 
004021 aatatgttga tgctgacaga tccagtttga ataccacaat atttgaaaat catgatctga 
004081 gattttctct gccttatctt gacagctttt tgtatttgga tttttaaatg aaagtcccca 
004141 tcggataaaa aagtatacta cgagtaggac acgatttaca ataacctgtt tgaagacgta 
004201 tgcatcacgg attgcagtgg gtgattgccg cgatggtgtt ctcttctatt cttatcatga 
004261 ggtacaagtt gattcaattg aaacaataca tttttatgat gtttattttt atggagcttc 
004321 tttgtcgtta cctctaatcc tcgtattgat ttatgccaga atcttaggaa gttggaactg 
004381 atctattctg atcctgccca acggctagtg ggtgatgttg cccttttgag ctgtgaaact 
004441 gctgttgtat cagatcgacg agggagcata tctgtactgt cttgcccaag attagaaggt 
004501 atgccttggt atagatgtct atgttatccc tttcttttta gtttgtacct gttcttttct 
004561 ctggattctt tttaatggta gtgcctcctc tatactcttc tgcatcttgg tcatactttg 
004621 taattttgta gccttcatgt ttagtttctc aatctaattc ctttattgac atactaaata 
004681 tgcagtataa acatcacaat atagctggca taaaatttgc cagtgtagta aggccacata 
004741 gttgaatatt gtgcctagaa gctttatgaa tttcgtaata gaattcaaaa ttttgcatta 
004801 cgtttgtgta cttctcatca tatatgcatt actttgtaat atctacctaa attaatttaa 
004861 attttacatt acgtcaagat ttattttgac tttttttaac atatcttgca gtatccgaaa 
004921 gtccagagaa gaacctagcg gtgcattgtt cattttacat gggtgaaaca gctatgagca 
004981 tccagaaggt aagcttctgt tggcatctta gggctaacca gtgtgaattc cattaacgaa 
005041 aacataccaa agagagggtt ttgaacatgg gtattgggta gctgctttgg atttaaagga 
005101 tgaatcatgt gtttgtaact tgatgaacta atgggctgtt tggtttgagg aatcaaatca 
005161 tcctaggatg agttttttcc agcatgaccc atcatgagta ggggtgaaac agtgcggaaa 
005221 cggacggaaa caacctttat cgttttcgtt ttcatatttt ttttggaatc ggaaaccccg 
005281 aaaacgaata ttttcgaaac tgaaaacaga gcgaaaacga accggtgcgg atacggtaat 
005341 gaaaatttat cggaatacaa aaacccctca aactgagctt caaacttttg tcaagtctaa 
005401 ttctcaagtc tcaacagtca acaattcgtc ataaaacaca attatatcaa gtctaattgt 
005461 taagtctcaa cacaagtaca caataacact taacacggag tgacggaggt ggaggttgag 
005521 gaataacacc tgctggctgc tgccactggg ctgctggctg ctgcgaggcg aggcgttgtc 
005581 ggcggtgagg aagagtcgcc agtggggctt gaggtgtcgt agacttgtcg gtgtggctat 
005641 ggcggcgtcg tcagtggtgg tggcggcggc gaaacggcga gacggcggcg cgaaacggcg 
005701 ggacggcgcc gcgagatggt ggcggtacga gacggcggta tgggacaacg aagagcgact 
005761 gcgagagagg aagggtgggc acggtcgcga ggacggcagg ggcgaggtca cgaggagccg 
005821 aggacggcag accagcggtg gcgcgggcgg tgggcgctgg ggagcacgat gccgtgatct 
005881 ggattctgga tgcgctgctc cgccgccggc tcgcggtcgc gcgatgccgt gctcccgtgc 
005941 agcgatcagt gtgtctctcc tctctagggt tagccgctat ttgggtagat gctgcgattt 
006001 ggattgggct gggaacttgg ggacgactta tagactattg attctatggg cctttttaac 
006061 ttcagaaatt ccggcaaatt ttttggaatt tttccgaccg attccgagtt ccgacggaaa 
006121 ctgctattat catattcgat ttcgtttccg agaaaatatt tccgttttcg attccgtttc 
006181 tgagaaattc tgaaaaaatt ctgaccagct gattccattt ccgaaaacag gcccggaatc 
006241 cggaaagttt ccgtaccgtt ttcaccccta atcttgaggt catcccatga ttttgatggg 
006301 atgatccaat gatcccattc atcttttttt ttccaactaa gcatgtcgct ttgaggaatg 
006361 aggtagaaat ttagtagtcc attctgctct tgtttggttc ggaagttgga cctgctggtg 
006421 cattgagtat ccaattactt agatgaaaca gcccataatt gatctaggag atttgccttg 
006481 ttatctctca tgatcccgtt attttccctg aacatttggt tttcattcat catgacccga 
006541 cccttttctt tctatatgag ccccatggag aagtgtgacc gaactagttt catgttttat 
006601 attgttgctt tgctttccta tggttaattc ggtcttgtaa tttgctgtag gttgcattta 
006661 agcattggct tccaattgat gatttgacag aaccagtgtt ggagtcggta tacaactgtg 
006721 tcgtcgcaag cactctgctg gggagtatct ttgttatgat tccactcaca aggtgtagtt 
006781 ttgaagattc caactctaga atctaaattc atgctattag ctatttatct gtgacagctc 
006841 agtcagggcc actgctagcc tgtcggtaac atctaaacca atttgggaga ttgaatttgc 
006901 tttaagttaa tcagggttgt gaactatgat agttttggct aagcttcaca attatatttg 
006961 gtacatgatt tttgaaatgt tattcacata aataataaaa tagaacactt tatcgtttag 
007021 aattatttgt tgctatgctg ttcctgagga ctagatgcca tacacattga taatgtaaac 
007081 aaagtagtca atgctcgcac cattactaat taaatccaaa ttgattgtgt ttaacctgat 
007141 aatttgtttg cgtactagtg tcgacaacta attggtaaac taagcccttt cccattctat 
007201 atccttttgt aacaaggggc cagagttatt ttatctctgc acactagtgt tatgattctg 
007261 aagctaatga attggtaatg cagtgaggag catcaaatgt tgcaagatgt ccaagaaaga 
007321 ctttcggttc acccattgac tgctccactc ttaggaaatg atcatgcaga gtttcgtcgc 
007381 cgtggtatcc cggtaagata attaaactgc catactgaaa gctagttttt tttgcaagtg 
007441 ttgaataacc ttatacacta ctgctatgac agtcgggagt accgcccatt ctggatggcg 
007501 acatgcttgt gcagttcctg gagctcacca gcgaacaaca gcacgatgtt ctcaatattg 
007561 tttctcctgg aaagaagagg caacacgata tctcggtttt ccaggtcatg cgagcattag 
007621 agagggtgca ttacgcactc aactgaggcg ttcaacaatc cattcaaccc ggtcactgtt 
007681 cttaccgaca tggctgtctc caacctgctg atatttgggt ggcatcatcg ctgaatttgg 
007741 atccgagccg agcaccgagt tgttgcagct gaagctgcta ctggagcaca tacccagaac 
007801 ataccaaatc tcagctgtag tgaggtgctg tgttttgctg tgggatgata ggcccatctg 
007861 atgtcgcaat agtgtgtcat tgctctagtg caatctttgt aaataacgaa taatattttg 
007921 gcagaaggat gtggatacaa atccttttgc ccagtgaaag gaacaaccct cgtgaacgca 
007981 t

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AV939695 bah23i11 729
more... (Total Hit Count: 3 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ904670 whthkles35m18 716
more... (Total Hit Count: 13 )
/rice/oryzabase