cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK063353     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os07g0529000 ( IRGSP 1.0 )
RAP - Chromosome No. 7
RAP - Location, Length 21,351,289 -  21,353,660  ( - );   2,372(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 21,351,289 -  21,351,752 ( - );   464 (bp)
Exon 2 Location 21,351,890 -  21,353,493 ( - );   1,604 (bp)
Exon 3 Location 21,353,575 -  21,353,660 ( - );   86 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os07g0529000 Os07t0529000-02 106341 001114C03 12112 LOC_Os07g34520.1 AK063353 26265 AP008213.2 255677434 BAF21753.1 113611375 NC_008400.2 297607852 NM_001066374.1 115472480 NP_001059839.1 115472481
Os07g0529000 Os07t0529000-02 106341 001114C03 12112 LOC_Os07g34520.2 AK063353 26265 AP008213.2 255677434 BAF21753.1 113611375 NC_008400.2 297607852 NM_001066374.1 115472480 NP_001059839.1 115472481
Os07g0529000 Os07t0529000-02 106341 001114C03 12112 LOC_Os07g34520.3 AK063353 26265 AP008213.2 255677434 BAF21753.1 113611375 NC_008400.2 297607852 NM_001066374.1 115472480 NP_001059839.1 115472481


Chromosome: 7 ,  position: 21,351,289 - 21,353,660 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 attcgctcta gccttcctca tcgttgacag tgcgtggcag tgtactcttg gttatcatgt 
000061 cgtcgccgtt ctccgtgcca tctctggtac atttcacgaa tcgattagca atttgttaca 
000121 gatgttaagc gtgatcgata atatatcgtg tgattttgat cgtgcagatc atggaggagg 
000181 aagggcggtt cgaggcggag gtggcggagg tggaggcgtg gtggggaacg gacaggttcc 
000241 ggctcaccaa gcgcccctac acggcgcgcg acgtcgcgct cctccgcggc acgctccggc 
000301 agagctacgc ctccggcgac atggccaaga agctgtggcg cacgctcagg gcgcaccagg 
000361 ccaacggcac ggcgtcgcgc accttcggcg cgctcgaccc cgtccaggtc gccatgatgg 
000421 cgaagcacct cgacaccgtc tacgtctccg gatggcagtg ctcgtcgacg cacacctcga 
000481 cgaacgagcc gggccccgac ctcgccgact acccctacga caccgtcccc aacaaggtcg 
000541 agcacctctt cttcgcccag ctctaccacg accgcaagca gcgggaggcg cgcatgtcga 
000601 tgtccagggc ggagcgcgcg cacgagccgt acgtggatta tcttaagccc atcatcgccg 
000661 acggcgacac cgggttcggc ggcgccacgg ccaccgtcaa gctgtgcaag ctgttcgtcg 
000721 agcgcggggc ggccggggtt cacctcgagg accagtcgtc ggtgaccaag aagtgcgggc 
000781 acatggcggg gaaggtgctc gtcgccgtct ccgagcatgt caaccgcctc gtcgccgcgc 
000841 ggctccagtt cgacatcatg ggcgtcgaga ccgtcctcgt cgcgcgcacc gacgccgtcg 
000901 ccgccacgct gatccagacc aacgtcgacg cgcgcgacca ccagttcatc ctcggcgcga 
000961 ccaacccgcg cctcaggaac cggagcctcg ccgccgtcct ctccgacgcc atgtcggcgg 
001021 gcaagaacgg cagggagctc caggccatcg aggacgagtg gctcgccacg gcgcagctca 
001081 agaccttctc tgactgcgtc agggacgcca tcgcgagcct caacgccacc gacgccgaca 
001141 agcagcgcaa gctccaggag tggagcgccg ccaccagcca cgacaagtgc gtgcccctcg 
001201 agcaggcgcg cgacatcgcc gcgggcctcg gcgtcacatc cctgttctgg gactgggacc 
001261 tgccgagaac acgggagggg ttctaccgct tccgcggctc cgtcgcggcg gccgtcgtcc 
001321 gcggccgcgc gttcgcgccg cacgccgacg tgctctggat ggagacgtcg agccccaaca 
001381 tcgccgagtg cacggcgttc gccgagggcg tgagggcggc gagcccgggc gcgatgctgg 
001441 cgtacaacct ctcgccgtcc ttcaactggg acgcctccgg catgacggac gccgacatgt 
001501 cggagttcat cccgcgcgtg gcgaggctgg ggtacgtgtg gcagttcatc acgctcgccg 
001561 ggttccacgc cgacgcgctc gtcacggaca cgttcgcccg cgacttcgcg cggcgcggca 
001621 tgctggcgta cgtggagagg atccagaggg aggagaggag caacggcgtg gagacgctgc 
001681 agcaccagaa gtggtcgggc gccaacttct acgacagggt gctcaagacc gtgcagggtg 
001741 gcatctcctc taccgccgcc atgggcaaag gcaagaaagc ttgctgatga tttttcaaga 
001801 aagcttgctg atgatgctag tgttcaatac tgatttaatt ggctattttt ttggaaattt 
001861 tttcaagatg atttgctcaa acctgtgttt ggtttctgtg cttgcaggag ttactgaaga 
001921 gcagttcaag ggctcatgga cagggcctgg aagtgagagc agcagccatg ttcttgccaa 
001981 atccaggatg tgatgaggat tattcagagg aaaattttaa acagttgaaa tttatgtaat 
002041 aaaagccact ctggacttca gccaaggagc cttgatactt tacagactga actacagcac 
002101 gcacggatca actaattaca tatagttaca gtatatatga atgattgagt tatgactcaa 
002161 aatggaacaa tcagtttggg gtaaaatgta attgatctgt gagtttatca cagaaagtat 
002221 tttttgcacc tagatgcaaa aattgggcac atacagtact gttatgcatt tacagagaat 
002281 tctcaagttc ataaaagaag tgtttgcaaa tgaattattt agtaaaaact ttttttctct 
002341 ttcttgataa tgtatattgc ccaaatttat ct

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK252018 FLbaf140e02 2071
more... (Total Hit Count: 9 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ873293 whthls11g12 725
more... (Total Hit Count: 8 )
/rice/oryzabase