cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK287607
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0569500
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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22,897,875 -
22,905,149
( - );
7,275(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
22,897,875 -
22,898,642
( - );
768 (bp)
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Exon 2
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Location |
22,898,989 -
22,899,157
( - );
169 (bp)
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Exon 3
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Location |
22,899,243 -
22,899,497
( - );
255 (bp)
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Exon 4
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Location |
22,899,652 -
22,899,792
( - );
141 (bp)
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Exon 5
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Location |
22,899,893 -
22,900,051
( - );
159 (bp)
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Exon 6
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Location |
22,901,401 -
22,901,561
( - );
161 (bp)
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Exon 7
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Location |
22,904,990 -
22,905,149
( - );
160 (bp)
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Chromosome: 6
, position: 22,897,875
- 22,905,149
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gtgcgtgtga tcagatcgtg tgccatggag tcgatgctcg tagccggagc gggcgcggcg
000061 gcggtggcgg ccgtcggggg cctcgtcgcg gcggccgcgc tcgccgacaa gctcgtcgcg
000121 gcgccgccgc cgcgcaagaa ccgcgccaac ccgcctccag gtaattaatt aatccagctc
000181 gccgtgttcg tttcgatcga tcaaatgatc ttctccaatt ggtttgatcc tcactgctgc
000241 tgtgtctcgg tgttcgtcgt actctctcca ttgattgatc tctgttggag atggcagtgt
000301 atgtggttag tttgttcgtc ggaaaatatg tcgaattttc tctgtttcag ctagtgcgta
000361 agcttttttt ttttgatgga atggtaattt ctggtgtcgc aacaattaga aatgagcatg
000421 aatgatcagt ttggcgtaga taacaggatt tgagctataa cagcactcac ggctgcgaca
000481 gcacacctat tgtgcacaaa caagtactcc gccgttctaa aacataagta ttttttttac
000541 atgtacacga tctccgagat gatactttaa tcaacaatat ctacaaaagt aaaatgtctt
000601 aaataaaaag agttgcatat tatgatagtt cgtttaatga taaatataat aaaattaaat
000661 ttacatgatt aatctttttt aaaaagtttg acttagcact gttctaaaaa tgcttatatt
000721 ttgggacaga gggagtaata taaatggagg aggtggttag tggttttggc agatgtaaat
000781 atagtataat tgtagtgtaa ttacattgta acttacatat aactacgata taaatttgaa
000841 ccgttcgatt tgctttaaaa ttcgcaaggg atgtaggaaa aaatcacaac ccactcacat
000901 gtgaggcgat tcagtaccat tacctccgtt ttcacataag tagcacatca cctagggatt
000961 tttgaaaatt acatactccc tccgagctga tgatattagt cgctttaaat aaggataaaa
001021 tcaaacctta aaatctttga ctataaataa tttctaaaat atttatctta aaaaatgaaa
001081 accatatata tatatatata tatatatata tatatatatt agtcttaaaa agtacttcaa
001141 taaaatcata tatttgttga tatttctata tatattataa tagaaaatag ttatcaaagc
001201 tactctttgg agactgtgcc cttgtccaaa acgacaaata ttattaacct ggagggagta
001261 caagttaaac tatagttaca tgtaagttac gttgtaatta catcacggta tttacaccta
001321 tcaaattttt tagcgaaaat ttaacgacaa atgtatagct aatcccttaa ttttgatata
001381 ttgcttgaaa atcgaatttt ccgaacagca atttgtcgcg atggaccata taggaattaa
001441 agtggataat ccaaatccac tagattttat tgaaactata tatcctaatc ctaatactaa
001501 tccgttggat tttgaaaaaa tacttaccat atctccgttc gattggattc agaacggatc
001561 agattgaaaa gtgttaaatc atttttcatc cttttttttt tgagaaatcc tttttttttc
001621 tgtagtcctc ggttcagttt tgactgaatg tctgaaaggg atgttgttta attaacttga
001681 aacagttcaa aattacaagc attcatgtct ctgtcagttg aagtagcctt ctccttctct
001741 tctatatgtt cgtcagacta cttcagaaag taggtacttc ctctagtcac gaatatgtta
001801 ctgagaggct ataactaaaa acacagtacc tctgatttgt aatagataat gcccttaaca
001861 tttgaaaata tgtttactca tccatcttat ttatagaatt tatataatta ttatttattt
001921 tttgagttat tttattatta gaaatatttt aagcataatt catatcttat tcacttaccc
001981 aaaattttta aataagacga atagtcaaac gtgtatcaaa aattaactga gccggagaga
002041 ggatatctga aactatgaaa agaggagcaa ttaaccattt cttccttaat ccgcctgcat
002101 gcaacttgaa atcacaaaag caaactcaag tcaatgccat ggggaaaatt tacagtagcc
002161 cctgcttgca ggtaccaaaa gaaaattgat caatttcatg caggtgtgac caaagtactg
002221 gattccaggc atagcacaag aacattccac ggaagtacca cagcaaactc aatcaatcgt
002281 tttacttggt ccaaaagaat taagaaaact gtgcacctct taacccattc taatgatgag
002341 gatccatttc ctaattaaag gactttgttg tcaatcaatt agactatatt aataaagatg
002401 agccatttat tttatctttt ttttttttga aaaatgttga ccagagaaga gaaacatccc
002461 aaaggcattg ccatcttacc tgtatacgga ctctgttgcc accgttctta aaaactttta
002521 aaatgatttt cattttctac ggaaaagagt attaatgtag aatagtaaaa aaaatcatta
002581 tcagtatttc cgacggtggc ggggagttat ataatatata tttatgatga attgtattcc
002641 cctgcttttg ttgaaacaaa gtgttctttc aatatctcat tcactattca tttgacttat
002701 atggatttta aaaataggca atttatatgc cataccgtta tccattctga gcatggacta
002761 aatatttaga acgtaaattt tgaacagact aaccttttag tgtgccggaa ctattaaaaa
002821 aaattaaaga cttttattaa tccataaaat atgtccgaaa atgtgttctt cagtttgttt
002881 tcttctggtt aagtatgcac tggttctagt tggcacatgt ataatagttg tgattgcata
002941 tctattttgc tgattaagag taaacaaatg gaaataactt tctttgagtt acgctttcag
003001 ttaagattgt tttgaaatta ttaatgtgca aaatgaaagt agttattata gatcctttca
003061 gatatgtcta tttcgatgag ccactagtgc ctgtgttgaa aatgcaaatt attctagaca
003121 aattttgcta gaggactttg tgacttcgtg attttagctg tatgacactg cacgaagtaa
003181 ctttggggga caacactcta taaacgtgaa aattgactcg tcgacaccgc ttctattaga
003241 atattcattc caggttgaat atgagagtga aatcatgtga aagttctgaa atgcctctga
003301 gcctacatgt gaggtctacc atctctctat cactggccaa aatttcatca gatattttta
003361 gcttatttga ttgtgtttac tccatctgtc catcatctat ccatgtacat agctagcatt
003421 cttactgaaa aatgacccaa taaaaggaaa tatagaacct gtacatgtta aattacttgc
003481 ttgaatgttt ggtgttttca tttatgcaga gacgaattac caaaaacaaa ttaatttcag
003541 tccactacaa gagctttagt aataacatcg ttagttattg taatgcagct gttcctggtt
003601 tacccattat tggaaatctg catcaattga aagaaaagaa gcctcatcag acgtttgcaa
003661 aatggtctga aacttatgga ccaatctaca ctataaagac cggagcttct ccagtggttg
003721 tgctcaattc aactgaagta gccaaggagg tatgcaagtt gtcctttttc agcatttttt
003781 tgttacctgt taatgttttc attttctttc cgactaccca aattggtgtc cccatatact
003841 ctccactctt ttacccacac ttttcattca ctgatatcct ggactagcac cacaatttgc
003901 tcgagctaag ggtgctggtg gtccatcttt gttaggaaat aaaataaaat tatcatgact
003961 gttgcatcaa gcaatgcatg tattcttaca taattgtaac tctggtgacc gcatactgtt
004021 ataaaatcaa cctatccgac attacaactc caagtcttaa attataaccg actttataca
004081 catattcgac acaaactcta acaaataaag taataactaa ttcaatagaa acaaacatag
004141 acttatatgg ttcaaaattt aatcttagtt ttcccctttt ttttcaaaat tttcacttaa
004201 tctatcttta gactcttttg aatttctatt caaacagata aaactctgaa gagcaaggaa
004261 ttcaaaagag tacaaatatg tgatgttttt ttttttaaaa aagatgaatt caaactgatg
004321 aaatttagaa taaataggca aggtttcaga ttgatcaact cgaaaaaaat tgctctaaaa
004381 tgctaaaaca cgaatgaagg ggtagttaag gacaaggaag cacacgtggt tacagttgta
004441 ccattgtttt tacgcttttc aaattatcct tacacatgca aaatagaggt gcttttagta
004501 tgatgtgtat gtaaattgca tggttttgac aatttcaaat gctatcctat ccggttactt
004561 agtttacagt tgattttttt acttgtgcaa aagtttagaa ttgtaagtgg acatttctct
004621 tgataaatta aatgtgaata tcataattac aattaattca gatcagaaat gaaattaacc
004681 tacaacatga actctagagc taatatgata ttattttttg tttctctttt ttcgtggagg
004741 taaaactgta aacgctttgg ttcatgcaat tgtgctatga tgttggcttc tagttcatga
004801 catgggtcct atgatgtttg atatgtttta tcttccttat tattcttggc ttcaaggttg
004861 acatgtttgt atatgtttgt gcaaatacct tgtttggaaa gaaaataaag gcaatgtaag
004921 gaataacatc ccaaagactt gaactctgtt tgatcttcaa tatatctaag tcttcaaaaa
004981 agaactttta tactactttt ttcttactct tgcatagtta catatactca ataatgataa
005041 tctcatatta attggtctgt aaataacaaa aacacatatt ctgtactact ttttccaggc
005101 gatgattgac aaattctcat ccatatctac tcgaaagcta ccaaaagcaa tgtctgtgct
005161 aactcgtaaa agtatggtcg caatcagcga ctacggtgac taccaaaaga tggcgaagcg
005221 taatattatg attggcatgt taggttttaa tgcacaggta caaatctcag caaaatttaa
005281 attcaatagt ggattttggg taccattagc actcagttaa ttgagctcta acaatgaaat
005341 gcttgcataa atttcagaaa cagtttcgcg gtacaagaga gaggatgatc agtaacgtgt
005401 taagcacttt gcataagttg gtttctcttg acccacattc ccctctgaac ttcagggatg
005461 tttacattaa tgagctgttc agcttgtcct tgatccaggt ttgtattacc tctgaacttg
005521 aactctccag tggtccgttt gttacttcca atacctgtca tgattgttat gaacttataa
005581 ttgttgcaat ttcgtagtta ctaggactga tcttgattgt tatgaactta tatatatttg
005641 ttacaatttc agagtttagg tgaggatgtg agttcagttt atgtggaaga gtttgggagg
005701 gagatatcca aggacgaaat ctttgatgtc cttgtgcatg agatgatgat gtgtgcagtt
005761 gaggctgact ggagggacta cttcccctac ctcagctggc ttccaaacaa gagcttcgac
005821 acaattgtgt ctactacaga attcagacga gatgctatca tgaatgcatt gatcaagaag
005881 cagaaggaga ggattgcacg cggagaggtg acacaaaact tctattcgta tccaaaaata
005941 actttttttt tctgcagatc atctgaactg aactgtaacg tattgcatgc aggcaagggc
006001 atcctacatt gacttcttgc tggaagctga gaggagtgca cagctgacag atgaccaact
006061 gatgctgctg ctgtcggagt ccatcctggc tgcagctgat actgtcctgg tgaccaccga
006121 atggaccatg tatgagattg ccaagaaccc tgacaaacag gcaagaaatt aactgatact
006181 acctccagtt ttattttttg gtttcggaca acacatgttt tagcatgttt tctttgtaac
006241 ttgtcgtaaa cgtcaattaa ttttgtccgg agggagtact ttcaattatc ttttgtatat
006301 actctttctt gtattgtatt gtgatcctct gacataactt tctcttgata tggtcattga
006361 catgtcagcg atcatgtctc tataacttta cgagaaagaa agtcagagga tctcaatccc
006421 tctttctttc aaatgcattt cagcattttg ttgccaacca aactaataaa caattgattg
006481 tttcttgttc ttggcacatc gatcaggagc tactctacca agagatccga gaggcgtgcg
006541 gcggcgaggc ggtgaccgag gacgacttgc cgcggctgcc gtacctcaac gccgtgttcc
006601 acgagacgct gcggctgcac tccccggtgc cggtgctgcc cccgaggttc gtccacgacg
006661 acaccacgct cgccggctac gacatcgcgg cgggcaccca gatgatgatc aacgtgtacg
006721 cgtgccacat ggacgagaag gtgtgggagt cgccggggga gtggtcgccg gagaggttcc
006781 tcggcgaggg gttcgaggtg gcggacaggt acaagacgat ggcgttcggc gccgggagga
006841 ggacctgcgc ggggagcctg caggcgatga acatcgcgtg cgtcgccgtg gcgcgcctcg
006901 tgcaggagct cgagtggagg ctgagggagg gcgacgggga caaggaggac accatgcagt
006961 tcaccgcctt gaagcttgac ccgctgcatg tccacctcaa gcccagagga aggatgtgag
007021 ctagaagaag cagttccatg catgatgaag aattaatgat attctcgaac gtattttgca
007081 ggatgaatag tgatattaaa aatataatgg tatatactac ctctggtttt ttaatatgct
007141 agaaaaaaat gtatgtgcac tgctagggga gaaattaaat ttatcatgaa catcgtagta
007201 ttttttttta aaatgtacga cgccaacgtt tgaccattcg tcccttatat attcaatggt
007261 acaatttaga tttaa
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
