cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
|
General information
|
|
RAP - Accession No.
|
AK243334
Link to RAP-DB
(
IRGSP 1.0
)
|
|
RAP ID
|
Os06g0698900
(
IRGSP 1.0
)
|
|
RAP - Chromosome No.
|
6
|
|
RAP - Location, Length
|
30,243,041 -
30,247,368
( - );
4,328(bp)
|
|
Exon (Data source : RAP-DB)
|
|
Exon 1
|
Location |
30,243,041 -
30,243,377
( - );
337 (bp)
|
|
Exon 2
|
Location |
30,244,355 -
30,244,423
( - );
69 (bp)
|
|
Exon 3
|
Location |
30,245,284 -
30,245,389
( - );
106 (bp)
|
|
Exon 4
|
Location |
30,245,772 -
30,245,900
( - );
129 (bp)
|
|
Exon 5
|
Location |
30,246,588 -
30,246,700
( - );
113 (bp)
|
|
Exon 6
|
Location |
30,246,810 -
30,246,896
( - );
87 (bp)
|
|
Exon 7
|
Location |
30,247,009 -
30,247,368
( - );
360 (bp)
|
Chromosome: 6
, position: 30,243,041
- 30,247,368
bp
|
|
|
Now loading
|
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 gatgcggcgg cgcacgtcgc gcccacggtc gaccacctcg ccgcggtggc cgccgaggcc
000061 gaggcgatgg cccgcttcga ggaggagcac cgcgccctgg gggcggagga ggagtatgag
000121 gaggaggagg atgagttgga ggaggaggag gaggagatgg aggaggatga ggacgcgcaa
000181 catcatgagg gggtgggcgg cgaggtggct gtcccgatgg acgcggaggc cgccgcgcag
000241 ctggacccgc acggcgggat gctcgccgcc tccggcgctg tccagcccat ggcgtccaac
000301 caactcaccc tctcgttcca gggcgaggtc tacgtcttcg actctgtctc ccctgacaag
000361 gtcgtttgcc tctcatgcgc ttggccttgt ttgtttgtca tgtgtgtttc ggtatagact
000421 gggattgatg ttgcaaaaaa aaaaaggctg agtgttcgat tacttctcgc aggttcaagc
000481 agtgctcttg ctactcggtg gaagggagct gaacccaggt ttgggctctg gagcatcgtc
000541 atctgcgcca tacagtaagg ttggcacggg tgatggtgaa ctgtctttct ttgtagtatc
000601 agttcattat gtttgacagg attgtgcact ctggagttca ttgtgtattt tttttccctt
000661 ggtttcagag gttgaatttt ccacaccggg tggcatcttt gatgcggttc agagaaaagc
000721 ggaaggagcg caactttgat aagaagatcc ggtattctgt tcggaaggaa gttgcactta
000781 ggttggtgct agcttagcat tggctgtgga tgtttatacg tactgaaatg ctatagaatt
000841 ttgttcctat ttgaatgctg attgacctga attaggaaga gtcaagcgtg ctgtatttga
000901 tctgtgagta atacactctg ctaacaatgt acttaatata gtggaagtga actgaataat
000961 ataatctaaa cttggcaact tatacattgt atttgtacca aaagcgtgtt ttagttttga
001021 gttgtctggc tgcttttatt aagctattct ccctctgttt catattgtaa gtcgttctga
001081 cttttttcgt agtcaaactt cttcaagttt aaccaagttt atagacaaat ttagcaacat
001141 gtacaacacc aaattagttt tgttagaact aacatttaca atattttgat aataagtttg
001201 ttttgtgttg aaaatattgc tatattttta tataaactta gtcaaactta aagatcaaag
001261 tatcagtgtc aaagcgactt ataatatgaa acggaggtag taccttttta agtatcagtg
001321 tctttcttgt ggttactttc agttttgata ttaccgtggc agatagtagg atttatattt
001381 tgctgttatt catgttttct aaattacctc tgcttagatt atgtacagga aatcttcata
001441 gtttaaaata ttttctatgt atgtgtagga tgcagcgcaa tagaggtcag tttacatctt
001501 caaaaccaaa gggtgatgaa gcaacatcgg aattgacagc ttcagatggc tccccaaact
001561 ggggatcagt ggaaggtcgg cctccctctg ctgctgagta agtagagaaa aatcccattt
001621 tttttggttc ttggtttatg acttttccag caatatttct tgatgtgtga aacatccttt
001681 acatatttat tagcaaggtg ttgacaatca atccatgctt ggaatcgtgt gctctagtgt
001741 attgcattgt atagatgcta tgaactgtgg atcaatccca ttttttactt ggctaacttt
001801 agttgaacaa tttgcatgta agtttgatat agatatcttt gttatactta tcatacatgc
001861 aaatatgctt cttttttgta tggtgtatgc caggttatta ctaccttttt atcattgtgg
001921 tttctctaag catatgaaac atcatttata aattttggtg attgctattt ttttttcaga
001981 tgccatcact gtggtataaa tgcaaaggct acacctatga tgcgtcgtgg acctgatggg
002041 ccaagaacat tatgcaatgc ctgtggcctc atgtgggcaa acaaggtacc tataaatgtt
002101 tagtagtacc attgcatagc tagatttaag tcagcataga aactcaagag ttataactta
002161 taagtcaaac tttgtgatag atcatagatg tagcaaaata ttataacttc taagaactga
002221 agaccgactt aatattaaga ttctatcagc aattttttgc taggatcatt tttgttgaaa
002281 ttgtttaagt tacattatta atttgcactt tataagctat tatcgtgaca tatttaaagc
002341 accagttact cacacttgtc ttgacttatt tctatgtata tctatatatg caattgaagg
002401 ttaaaatgcc aagttcaagg tgtcatgcca acttggtatg cagtttgtta tttgagtata
002461 ggttgttggg atgagttttg ttgaagtttc tagtatacaa tccaatgcaa tgaagttaga
002521 tgcatggtgc tgatgtttga atatgtaatc tatttagtga gttctgtctg ttcttgaaca
002581 agtttcacac tatcattaat attagtctta acaatctgat gtgcttcctg gtgcatggaa
002641 agtttcatag ctgagcattt tgttaattgg caataagagt tttaaacttt atttgttgac
002701 aaacacagga aattgttggt aatccataat ccaaatccat aaatggtctg ttatacactt
002761 acactgaaag catgggtctt ttaaactatg cttcacattg ctttctcttt ctgtttgttt
002821 ttagtaatcc atacatcaag tgatcaaagt acttagatct tatctttaaa tttttgacac
002881 cttacctcat aaatgtggaa tctctgtttt tctactaaaa acaaatctct tttttttttt
002941 tgtaggggat gttgagggac ctatcaaaag cacctcccac acctattcaa gttgtggcat
003001 cagttaatga tggtgtaagt cattttcccc cattagctgc acatctattt acatactttt
003061 tgaggattct aattttcaca ataagttgaa agtgaaatga ctctttggct cagatgagtt
003121 gaatccttgt ttcgttatct agcttactga tgattgtagc catttttaag cagttgctga
003181 aaattttgga gaaattaatc aaaatattgg tccacaatgg cttctcaata ttttcttaac
003241 ttttatgaag gtaaatcaag ttatggtcca ttgccagggg attaaaaaac tgtggctcta
003301 gctattccat tctaaatttg aggatattag atagtgtgat atactgatat tgtttcctgt
003361 tatactggtc actggtgtga ctggttgact ttcaatccat agttgtaaac ttaaaatcat
003421 gacacataat tggtttagct atgggaagat ttaatgctga cggttgggca tctttgcatg
003481 ttattttctt ctctccttgg tattcaaaat atgaaagctg tcctataact gtggcttttg
003541 tttactgccg gttaaatatg aacttgtttt cctttatttg cactggcagc ctgaggctag
003601 cttcagcatc aatatactgt agtttacatt tgtttctgac ggcagtatgg cttataatga
003661 tgtggccatt taagaatttt aggggttgtt ttgttttgag gaattggatg gccaatggac
003721 catcagatac tcccaagtct cacttttttg ttcggttcga ggaatggaat gtgttggtcc
003781 ataaccacct catccctcga tatgtgattg attcctcgaa agaaacagcc taagttatgg
003841 cccatttcag gcatcaagta taatgtccta aaagtttctg tatcctgtta caaccaacaa
003901 attctctttt ccggtctctg tagcttcttc aatatgcctt gatatttcaa acaaatcaat
003961 ttttgaagct tctgctactt ttcctccaca gaatggaagt gctgcagcac ctaccaccga
004021 gcaagaaatt cctgcaccag ccactgtcaa tggccacgaa tcatcaacgt gagtatagcg
004081 atgtttgtct tgtggaggat cgcgaacatc atgccggcat tatatccatg tagtttaact
004141 gtctgtacta taacttgatg agaacctgtt aggtacctag gccatttctt taccatcatt
004201 tagggtttga atgttgttct gcatatgttg taagccatga aaaatcatgc ttccggtcat
004261 tatggccgta gcaattttat ttcttgttag actcttgggt ggaagtgaga acagagaagg
004321 tgatgaag
|
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
