cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK241795
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0665800
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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28,394,103 -
28,400,606
( - );
6,504(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
28,394,103 -
28,395,000
( - );
898 (bp)
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Exon 2
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Location |
28,395,099 -
28,395,356
( - );
258 (bp)
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Exon 3
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Location |
28,395,496 -
28,395,696
( - );
201 (bp)
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Exon 4
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Location |
28,395,897 -
28,396,239
( - );
343 (bp)
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Exon 5
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Location |
28,396,329 -
28,396,387
( - );
59 (bp)
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Exon 6
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Location |
28,396,911 -
28,397,236
( - );
326 (bp)
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Exon 7
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Location |
28,397,408 -
28,397,837
( - );
430 (bp)
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Exon 8
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Location |
28,398,346 -
28,398,960
( - );
615 (bp)
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Exon 9
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Location |
28,400,233 -
28,400,606
( - );
374 (bp)
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Chromosome: 6
, position: 28,394,103
- 28,400,606
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gtttcgtctc ctctctctct tccaccaaat attcccacct cgcgcggcta ctctctctct
000061 ctctgacagg catggcccac ctgcagctct cggcggtcgc cggcggcggc cggccggcgg
000121 cggcgggtgg gggaggggac gagatggagg acgtccggct gctggactcg tacgacgagg
000181 agatgggggg cggcgccgcc gcggcggcgg cgggggagga ggaggaggcg cacgtgcggg
000241 tcaccggaat gacgtgctcg gcgtgcacga gcgccgtcga gggcgccgtc tcggcccgcc
000301 gcggcgtgcg gcgcgtcgcc gtgtccctgc tccagaaccg cgcccacgtc gtcttcgacc
000361 cggcgctcct caaggtgatt tccgcgcgat tgcgattgca attgtgatgt gatccttttg
000421 cgtggctgag cccgtttgtc gagccgagtt ttgcgcgtct ccgggagcaa actgggattc
000481 gtgagctcgt tgacgctcac gcggtggtaa attttttgaa gttttttctt gcgctggaat
000541 tattgcgtag gtgatggttg gtgcggtaga acaggattct aggaagctgg atcgcgctgc
000601 ttgctcgtgg tttttctcga gcggttagaa gttggtgaat cggaatttac tcttgtctaa
000661 taataagttg agtttactaa ttactatgtg tgtgagtgtg agaccgagtc aatcgtgtat
000721 gatattgcaa ttttgggttt tagctggaga tgattttttt tttctttttg acttcacctt
000781 gcgatgacga cttttcatga gttgattcgt gaaatgtggt tagcccacag tgcccagagg
000841 ccagagtttt tgtgctcctt ttgctttggc ggttggatga gctgtaacct tgttgcaagc
000901 tcgtgattgt ggctggactc tctggattgt gggatttggg agctcaaaaa ggctggcagt
000961 ttgctgcgat tggttgttgc taccggcaga aatggggtaa ctgctgtact acgataggtt
001021 tgattggctg gtgaggcagg gagcagccga gtcatgtttt cggggggaaa gggtgctaag
001081 ttaaggatcc caatttatgt ggcttctaag tactcattga agtttccttt gagcaaaatt
001141 gaatgcaaaa tgatgttaca tgctaatttt gggacaagca tataatctca ttattctagg
001201 cccagtaatt accatgcaag tgtataaact ttcagcagtg ataaaattta gtcttatcat
001261 agtaataaca gtgtacttca caattgaaat ttattaatgc ttatggttat tatgttgtga
001321 agtactctac agtttctggt tttaatgact gttaatgtga atattagttg agttgtagcg
001381 ctagcaactt tttgatgagc ctattgtagt gcagacgggg aatgttgtgt ttcatccttt
001441 tgcttttgtt ggaactatta aggatggctt tcctgactat taagtagaca tttaccagca
001501 agttctatct gctacctcct gttcataata ggcattcatt tagtttgttt ttaatggcca
001561 cctactattc attgttgaca cacattttta gattatatgg gtcaattagc tacctgcaat
001621 ttttatttgg gtacttgttt atacaggttg aggatataat agaagctata gaagatgccg
001681 gatttgacgc agaaattatc ccagatactg ctatctctca gccaaaggca caaaagactc
001741 tgtcagcaca atttagaata ggaggaatga catgtgctaa ttgtgtgaac tcagttgagg
001801 ggatcttgaa aaggctatct ggtgtaaaag gagctgttgt tgccttagca acctcactag
001861 gggaagttga gtatgatcct tctgtcatta acaaggatga aattgttgag gctattgagg
001921 atgctggttt tgaagctgca ttcttacaga gcagcgaaca agataagatt ttgctaggcc
001981 tgactggatt gcacacagag cgggatgtta atgtgttaca tgatatcctc aagaagatga
002041 ttggtttgcg acagtttgat gtaaatgcta cggtctcaga agtagaaatt atatttgatc
002101 cggaagcagt tggtctgaga tcaattgtgg atgcaattga gacaggaagc aatggaagat
002161 tgaaagctca tgtgcagaat ccatatgcac gaggggcttc aaatgacgca catgaggccg
002221 ccaaaatgct tcatcttctc cgctcgagct tattcttaag tgtaagtttt gacctttgct
002281 cttctttttc accaccagca tagttatgca tttttgcaca aagattttta gttggatcaa
002341 tgtttgtgac aatatccttg acatggttgt gacctggagg acccttctgg acttctgttg
002401 gagcatttta gttatgtgga aaaacagcaa tcatcatgtc cctgtgccat ttgaatcagt
002461 tattttctcc taaccacata atagtttaga ttttttctat ttactttctt ctatcttaca
002521 tgtgagatcc acttgccata ggaaagcatg ctgctttaat tctaggtttg ggggtttggg
002581 ctgttcataa aagataacaa gcacatttta cttcatactt gaattaaatt tggcagtact
002641 gaacatttgg gagtgttaga tgatatgttc cctagctacg tagttctttt gcttctttat
002701 atttcagaat acttttgaac ttctcttctg cttgcttact aactctatcc aactgtgtcc
002761 ttgcaccaga ttcctgtatt ttttatacgc atggtctgcc ctcatatacc tttcattcgt
002821 tcaatactaa tgatgcactg tggaccattt catatgggag atttgctgaa gtggatattg
002881 gtaagcattg tacagtttgt tgtcggcaaa cggttctaca ttgcggctta tagggccctg
002941 agacacggct ctacaaatat ggatgtgtta gttgttcttg gcaccactgc atcatatgta
003001 tactctgttt gtgcactcct atacggagca ttcactgggt ttcaccctcc catatatttt
003061 gagacaagtg caatgataat tacatttgtg ttgtttggga agtatcttga ggtgcttgca
003121 aaagggaaaa cttctgatgc tatcaagaag cttgtagaat tggtccctgc tactgctctt
003181 ttgcttctga aagacaaagg tatatggtaa aattttgtcc ttcaaaacat atacaattaa
003241 gtcacagtgc cacactcatc acattagttt tagaagttat ttctgacttg ttttaggcaa
003301 ccgcctgtgt tttttttttc atttcatact atcaagttac acaaactcac attgttcttt
003361 tcaaatgcag aaggaaaata tactgaggag agagaaattg atgcgctatt agtccaacct
003421 ggagacatct taaaagtgct tcctggttca aaggttcctg ctgatggtgt tgttgtgtgg
003481 ggaacaagcc atgtcaatga aagtatgata actggtgaat ctgcaccaat tcccaaagaa
003541 gtatctagtg cagtaatcgg agggacaatg aacttgcatg gtgtccttca tatacaagca
003601 aacaaagtag gatccgagac agttctgagt cagatcatat ctctggttga aactgctcag
003661 atgtccaaag cccccattca gaaatttgct gattatgtga gtaacctccc atattctttt
003721 ctgtgatgtc cttcatttgc tttgtctgta cttattttaa gtgtttaccg tgtactttac
003781 atattaactt taaaagcgtc agagcatttt ttgtgatcta tttactattt ccgatacttg
003841 agaatgttgc aggcaaatgt tgtttgttta tgagaatttg attgttcata tgccctcttt
003901 taacatcatc attcttatgt tgctttctac ttctgatgta aaaagttgta acttgtttaa
003961 tctcaaaaca ttttggctgc ttaggagtac cttccagtcc aaagtttttc cctgtgttaa
004021 ctttagtctt tgaccttcta tgctttctta atacaaacat acatgtcttt tgtatattcg
004081 tgaaaaattt aacagaactc ttggaagaat agactagttt cttttatctg tgaaaagctc
004141 ttgtgtctcc taaatgtgcg gtaatgatta tagaggcctg ttatggttaa tgctgacact
004201 gcctacattt tgctttcagg ttgctagcat ttttgttcca attgtcatca ccttgtccat
004261 gattacattc cttgtatggt aagttcaaca tatactaaca caatttttga gtgatactat
004321 gtttgaaact tcaatttttc tgacatgtac attggctgct tttgtaggtt tttatgtgga
004381 tgggtgggag catacccaaa ttcatggatt tctggaacta gcaactgctt tgttttctct
004441 ctcatgtttg caatagctgt agttgtgatt gcttgccctt gcgcccttgg tctggcaaca
004501 cctactgctg tgatggtggc aactggagtt ggagctaatc atggagtact tgtgaagggg
004561 ggagatgcat tagagagggc tcaaaatgta aattacgtga tttttgacaa aacaggcaca
004621 ctaacacaag gaaaagcagt tgtgacaaca gcgaaggttt tctcaggaat ggatcttggg
004681 gatttcctca cattagtagc atctgcagag gtgaggttga acttaagttg cttgtatggt
004741 tcatatcaag ctgtagtaaa tgtgtttcgg tattgtaact atgcttcata tgaatgtggt
004801 aatgccaaaa tatgttttgc tcctcagggt tttagttaaa aaaaaagtgt tttggtcttg
004861 ttcatattga cttgtcaaaa gtaaaaaaag ttcttttgtt ttctactcag gcaagcagtg
004921 agcatcctct ggcaaaagca attgtggaat atgcattcca tttccatttc tttggcaagc
004981 tccctacatc aaaagatggc attgaacaaa gaaaagaaga cagattatct cagttgctcc
005041 ttcaagttga agacttctct gccttgcctg gcaaaggagt tcaatgcttg attaatggga
005101 agagagttct ggtgagtcac ataagctacc ataactcttc cttgcccttc ttgcagctga
005161 gttgaaaaca gtgtacaagt ctaacccatc tactgctgta ccatttcttt taagcaaacc
005221 actgattatc tagacataac tgttttgcag gttggaaatc gtactttggt tactgaaaat
005281 ggtgtgaatg ttcccccaga agctgaaaat ttcttggtag acctggaact gaatgctaaa
005341 acaggcattc ttgtgtccta tgacgatgat tttgtgggtt taatggggat aactgatccc
005401 ctgaaaagag aggctgctgt agttgtggaa ggactaaaga agatgggtgt tcatcccgtg
005461 atgctcacag gtgacaactg gagaaccgca aaagccgttg caaaggaggt tagtctctaa
005521 tctctattac cttccttgat ccataatgtt catcatttac ctgaacacct cttcatatac
005581 atgtctgcga ttttctgctc ttgcaggttg gcattgagga cgtgagagcc gaagtcatgc
005641 ctgccggaaa agccgacgtg gtccgctctc tccaaaagga cgggagcatc gtcgccatgg
005701 tcggggacgg catcaacgac tcccctgcgc tggcagcggc cgacgtcggg atggccatag
005761 gcggcggcac cgacatcgcc atcgaggccg cggactacgt gctggtgagg aacaacctgg
005821 aggacgtcat cacggcgatc gacctgtcca ggaagacgtt cagccggatc cggtggaact
005881 acttcttcgc catggcgtac aacgtggtcg ccatcccggt cgccgccggc gcgctgttcc
005941 ccttcacgag gctgcagatg ccgccgtggc tcgccggcgc ctgcatggcg ttctcctccg
006001 tcagcgtggt gtgctcctcg ctgttgttga gaaggtacag gaaaccaagg ctgaccaccg
006061 tgttgcagat aactgtagag tgacattgac attgctcctg tatacgtaca tagattcccc
006121 ctcttcaccg tttcatcaca gaaatgaaat gagatgagaa aaggaaggcc gatggcgtct
006181 cttgtaattt gtggatcgct ctggacgctg tttgctttac aggttttttc gattttggtc
006241 gggttctttt attcttttat tttccatttt atctctcctg gtgaattacc agctgtcagt
006301 aatcggttgt acgtttttgc ttatcttttc gctacaaagc agttctcatg gaaatgctta
006361 ccatcggctg tccggctaga aataaaaaat cggacgtctc agttgacaac agtgtaggtg
006421 catagtgaaa cagttaggtg tactcacgag ccaacggagc aatgcattca agcatgtttc
006481 aaaatttaaa tgattttttc tctt
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
