cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK121630
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0298200
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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11,138,175 -
11,144,689
( - );
6,515(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
11,138,175 -
11,138,964
( - );
790 (bp)
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Exon 2
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Location |
11,139,512 -
11,139,813
( - );
302 (bp)
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Exon 3
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Location |
11,140,435 -
11,140,635
( - );
201 (bp)
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Exon 4
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Location |
11,141,864 -
11,142,546
( - );
683 (bp)
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Exon 5
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Location |
11,144,467 -
11,144,689
( - );
223 (bp)
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Chromosome: 6
, position: 11,138,175
- 11,144,689
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 tgttccctct ctctctcctc ttatccttct cttctccgtt tgcttcgctg ctgctgctgc
000061 tgttctacgc gcgcgacacg gaagagagaa aagtggtttt ttattgggtt cctaagccct
000121 ttttgtttcc agaggcttct ggattgatcg gttgatctct ctcccttccc ctctagggtt
000181 tcctgggggt ggatctgagg agcggcggcg ctccttcgtc ccggtgcgtg atctctctct
000241 ctctcaatct ccgttgaggc gttggtttcc ccgcttggat tctgcgaggt tggtagtgtt
000301 tgcgtccgcg ggggtttgcg ctctggtttg gatttggacc gagttcgagt acttcggagc
000361 cctttcctct gttgggattc gttggctttg gggtgttctg catgcatcgg tccttttacg
000421 gaggatttgg ggggttttgt tctgtttctg gctggcttcg attttttact ggctgagtga
000481 ttgctgcttc gtgtgtacta cggcgttgtt cgtgtggttg gatttgatat gggttaattt
000541 tggtttggat ttcgtccggg gtcatgtaag tgagatttcg ggttaagttt gtgacgacag
000601 ctctgaagtt tcttacaaga tgtttttttt aacagtaatc gacttttcta cgattggcta
000661 tttttttccc ctttgtttca atcagaaaat aaatcttttc ccctttaaca aatgggcgaa
000721 gcatgttttt gaattgaatt tgtgggactg tttttttatt cgatgaacta aaaaaagtta
000781 tggatcttag gattgttttt ctttttttta ttcttcgtat gttgtcacta aataaaaaaa
000841 tttcagcttt tttctattgt gaaatatatt gtcaatatgt tcttgctttt tttttcgtac
000901 tatggtctaa gaaactggag ttaaaatgaa agagaactcg gtctttgact aattctacaa
000961 ttttttaatg ggacatcttt tctacatctt aaattccatc gttttcataa aattttcttt
001021 cgtgcagctt tttttttctt gcttgccata gctattaaaa tctttagttc ctttttttta
001081 atctttatcc agacatagct tgcctagatg caaaagttgt gtgttttgct atgcccgcct
001141 aaaataacat ttattttgcc atgtcatcaa acatttttct ttctgccaat cctgcatgtc
001201 catgaaaaca tttcttaata ggcttcctta ccctactttt tactggagta ctagtactca
001261 agactgcaat tttttcttca ccttttcgtt tacctttata aggctttttt tctcccctga
001321 tgctatgatt ttatcctgca aattgaccct tcttttggtt ttataaaaaa gactaggata
001381 gctccgtctt tctttgctta tatcgttatt tcagcctctt ctgttagata tatttccccc
001441 ctatttcgag tgttcaacta atgcggcttg tcgttcgttg cttggagaaa ttgtgataaa
001501 atatactatt ttcataatga aaccgataat tgtcgttgac tcgtaatgta gttattttgg
001561 ttcttgtgat aattttctac atctctcttt ttcccttgca aacttagtac ctatgggaat
001621 gggaatatat gctagaagca atgagtgagg tgctggaatt atataatatg tgccaagagc
001681 aggagattcc aaagactagt tgctgatact tttgtagtgg gatttcgatt ttttatgctt
001741 cggttggcaa atgggggcgg agtccacaga ttaatgagtc cgttgaaacc taaagtagat
001801 ggcggtaata tgtcctaatt aggaaatata tctacattat cctttagatt atattattga
001861 tagctgatgc aagacgacgc tgagtggaac atacttgttg ctacctgttt tgaacatttc
001921 tcttggtttg aatgaaaact gaaaaggatg gctacctagg gtcctaggtc atagcaactg
001981 aaacagtaaa aaatataaaa tctatgttct catgtaggtg gatgcccata aatgtatgaa
002041 tattcattta tgaatactct acggttttcc aatagtatgt gggaatattt ttttatgtgc
002101 tggtactaat gttttctaat aactgtttgt tgatactgta caggtttatg taaatctgat
002161 cgatccagaa agtttgtgaa aaaagagtgt ggcacatacc taaagctggc ttaaagtttg
002221 cccatagcta atatcatggg cgctctttgt gatttctgcg gggagcagag gtctatggtt
002281 tattgccgat cagatgcagc atccttgtgc ttatcgtgtg accgtaatgt gcattcagct
002341 aatgctcttt ctcggcgcca tacaaggaca cttctgtgtg atagatgtgc ttcacagcct
002401 gccatggtcc gctgccttgt agaaaatgcc tcgctttgcc aaaattgtga ttggaatggg
002461 catagtgctg ggtcttcagc tgctggtcat aagaggcaga ccataaactg ctactcaggg
002521 tgcccatcat cttcagaact ttcaaaaatc tggacatttg tttcggatat tcctaatgta
002581 gctcctgagc cgaattgcga gcaagggata agcatgatga gcatcagcga cagtggtgtc
002641 agtaatcaag acaatgctgc aggggacagc agtttgttag atattgctag tgcaaccctt
002701 atgagtgatc ttggcactgc tggcaagcca aagtctttga taggctcctc atctgaagct
002761 ggcgtgaacc ttcttccact tgctactgat cagatggctg gatccgtgga ttcgacatca
002821 gctaaggtgc tataaggctt tcacacattc ctccatacat agatttacta attcgcctca
002881 attcacctct gccgctgcat atactaccca tatcccatgg atgtaagata atcgactgtt
002941 ttcctcccta cagttggcca ttatcatttg tttactctac catatatgcc atgattttct
003001 ttttctgtgt gtactctatt ttgaatgcat attgtaagtg agttcactta aatttctata
003061 caagaaaaag aaataatcta actgttaatg atgcataagc ataagcttgt caatgattac
003121 tttaccatat gtcatggatt ttttctgtgt actccgtttt gaatggatat tgcaagtgag
003181 ttcagttaaa tgtctatacc aaaaaaaact gttaattgtg cataagcata agcttatcgg
003241 ggtagtggat ggtgcatgga ggttcaatag gctagcagaa gttgctgaaa ctgtatacat
003301 gcatgtgcaa tgagatatga acattatgat gtgtatggac tacaatctgg atccactcag
003361 cagatatgaa tagatgaaac agggtaataa cagaatatgg agtatagaaa atgtctatat
003421 tacagaaata gttataggac tatcgagagg tttagacagg tggataacta tggtgcttat
003481 gttcttatgt caagtcttgt cttccaagtg ttctgtgacc tcatgcagat ctacaaatgc
003541 atattctcac aacattaaaa tttggtacaa gtaatctttt aaaattattc cttcacaatt
003601 tctttggaaa atgttaagaa cactgctttg tattatttgg atgatgtagc atttcacatt
003661 ttagtctatc tcgtattcta atttatctta ctggaccata gattcccatg acaggttatt
003721 tgtgtggaga actttaaaga ttctatacag agagaattta ctttcgtctt tcttcaaatc
003781 actttctctg tacagcattt gcaaattttc aggccgtttt acttcaatct tccactacac
003841 catgtttctt ttttagagag cataagacac acacacacac acacacaaac acattcttcc
003901 acatacattc acaccgtgtg tgcgtgtaag caccctatgc acacacaagg cttcacccag
003961 gacatgcttt ctctcttaat ccacacgtgt gcatgctcca tgcttcttca aaattagttt
004021 gtcactaatc tgtgtttatg gtctccttat gcaggtgccc tatacggcag accaagatat
004081 gttcagcaaa gacagtatat atgaagattt ctgtgtggac gatgttgatc ttagtttcga
004141 aaattatgag gaactatttg gcacctccca tattcaaaca gagcaactgt ttgatgatgc
004201 tgggatcgac agttactttg aatcgaagga aataccttct ggaaactctg atgaggtttg
004261 tagtttactc ttaatggttc ctttttaaga agtaagcttc aattccacag taacattcat
004321 ttgtaggttt tctcgcaact cctgatcttc tttgtttcac caattcaact tgccctgcac
004381 atctttattg cttgcaggct tttctcttgg ttcgatttct cagatatatg ttatttattt
004441 gacctggttt gagtcaaatt tatctttcat taaagataaa ttattaggtg ttaaatctct
004501 gtacaagagg agtcagcatt tggattaata attaaattac tctcgtctct cccaagttta
004561 tcatttcagt ccatggtctc atccttctct tagatccctc ccctttagtt gttccttccc
004621 tgctctcctt ggaactgata tattcgcagc tcccatgttc aagaagcaaa agatggaagt
004681 tcttaattag tgtttctggt ctttgtgttt atgaaacaaa caaaactatg actgaaaatg
004741 gtaatcagta tacattctca aatgcagcag ttcatttgta atccatttgt ttggaaattc
004801 atgttgtatt tagttttgtc tggggcttat tggagttaac tttcagcatt tatattcatt
004861 attatctttt cagcagccca agctgatgca gccagtgacc agcaatgcag tatctgctga
004921 ttcagggatg tcgatcccag gagccaaagg tgattccagt ctttgtatac ctgtgaggca
004981 agctaggtcc agtatctctc tttcattttc tggtttgact ggtgagagca gtgctggaga
005041 ttaccaagat tgtggggtat caccagtgct ccttatgggt gagcctcctt ggcatcctcc
005101 tggccctgag gggtcatttg ctggagctac cagagacgat gctatcacac gatacaagga
005161 gaagaagaag agaagaaagt aagtgcattt cttactaatt tcgctactca tttgcttaaa
005221 catttatgct gtataaccac gtaagaattc tataataaat ttgtggctgc aaaagaactc
005281 aaagagaaat tgtagcttgt aaacttttcg gcacaacctc tactttacac atttggtaaa
005341 gagtgcttgt atcgttgagt ttcatgaaag aagacacatg gaagtagttt tcatggaagt
005401 taaattttga gtttttggaa acatcagttt ttgttaccct agttttacag taggtagaag
005461 taaaattacc ttaactctgt atctttttac ttacaccaaa aatgtttttg gtaggtaact
005521 gcatcacata aaaacatgct gaagattttc tgcttgaaga taacttattg ctaccttttc
005581 attcagagag ctaataactt cttgtttctt gccttctctt ctaatatgtc agtccactga
005641 tgctaacatg ctatatttct agcataccaa ttgcctcctt tttgacagct agctgattat
005701 cttttctcat ggcttctctt gacagatttg acaagaaaat caggtatgca tctcgcaagg
005761 ctagggcaga tgtgagaaaa agagtcaagg gccggtttgt taaggctggt gaagcatacg
005821 actacgatcc actctgtgaa acgaggagct actgaacaca ataaaacatt atccaagtgt
005881 taggttagca agcatcaacc aatgcttgtt gtggctggca ggaaggcact catactacaa
005941 acaatgtggc aggcctgcct ctaaaaacaa caaaaaaaac agagcaatca aggggacaaa
006001 aaggacaaaa agatttgaat ttgggaaatt tttcagatgc taccccctcc tttttcttct
006061 gtacagtgga gggaatttgc atctttctgt tgctttcggg aggagcgatt tgagtcgctg
006121 cccacctttt gtgaattaat cttgatacag ctgaacaaac ttcacttgca tttttatctc
006181 ctttctacta accagagcat ccacctaccc ttgctgtggt gtttttggtg gtatgcttcc
006241 agattggact attagcaaga caaggatgga tgtagtcgtg aaatcttctg ctgctctatt
006301 tattgttatg taaaatctgc tgtaatccgg agtttattct gcaactctgc atgtgtaaat
006361 accagatcag aataaactgg tagatgtaaa gttttcttta ttttctcaag tcgatgacat
006421 tggaacccat gtaaccggcc accaactttt ttgtttcact atgctcaaat attcgaaaac
006481 ttcagactgg cttaatgcta ttatttgtac taagc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.