Update info.cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK111942 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os06g0154500 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 6 |
| RAP - Location, Length | 2,805,669 - 2,811,930 ( - ); 6,262(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 2,805,669 - 2,806,177 ( - ); 509 (bp) |
| Exon 2 | Location | 2,806,791 - 2,806,971 ( - ); 181 (bp) |
| Exon 3 | Location | 2,807,303 - 2,807,635 ( - ); 333 (bp) |
| Exon 4 | Location | 2,808,695 - 2,808,832 ( - ); 138 (bp) |
| Exon 5 | Location | 2,811,390 - 2,811,519 ( - ); 130 (bp) |
| Exon 6 | Location | 2,811,607 - 2,811,930 ( - ); 324 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXPro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os06g0154500 | Os06t0154500-01 | 101007 | 001021F11 | 4268 | LOC_Os06g06090.1 | AK111942 | 7880 | Q84UI5 | MPK1_ORYSJ |
| Os06g0154500 | Os06t0154500-01 | 101007 | 001021F11 | 4268 | LOC_Os06g06090.2 | AK111942 | 7880 | Q84UI5 | MPK1_ORYSJ |
Chromosome: 6 , position: 2,805,669 - 2,811,930 bp |
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| Sequence (Data source : RAP-DB) | |
|---|---|
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Nucleotide
Fasta Format |
000001 gacgaattcc gcctccactt tcccttccct tcctcctcca cctccacctc ctcgtcgcga 000061 tccaaatccg aatccggcca tggacgccgg ggcgcagccg ccggacacgg agatggcgga 000121 ggccggcggc gggcagcagc cgcctgctgc ggctgcggcg gcgggggcgg gggcaggggc 000181 ggggatgatg gagaacatcc aggcgacgct gagccatggc gggaggttca tccagtacaa 000241 catcttcggg aacgtgttcg aggtcaccgc caagtacaag ccccccatcc tccccatcgg 000301 caagggcgcc tacggcatcg tctggttcgt ttgctccccc ctctctccca ttccgttggc 000361 ggcggcggcc tgattttggt ttggattttg gattttgggt ttggatgaca gctcggcgct 000421 caactcggag acgggggagc aggtggcgat caagaagatc gccaacgcgt tcgacaacaa 000481 gatcgacgcc aagcgcacgc tcagggagat caagctgctc cgccacatgg accacgagaa 000541 tgtcagtgct cccgatccgc tccattgttt cgaccacgga attcccttcc cccccaccca 000601 ccctcgattt ttaggcgcag attttgagat tctcgttgaa tgctcttgtc tctggttagt 000661 taagttggtt gcattaaatg gggaaaggag gaggaggtga gggttaggtt accaaatgat 000721 tgagttcgtc actgctcggc ctaatttggt agagcttttc cctccattct tgctgctgat 000781 gatgagtgct gcgagcttca gaaatagagg taactttgga gatgccttta aagaagccat 000841 ctgccttttg gggatgttgt tattcattgt gttcttgaat agtgggggag cgagtgatgt 000901 gaacagacct gacctggaga gtagcaacat cacatgattc tcgtacgtgc tgatgtcaca 000961 agccacaact agcttgagga ggaggaggag gaggaggagg aggaggagga ccaatctggt 001021 gttacacctt tttcctaagt cagtcaaatc cagtctgaat gcagtgggag tgactgccag 001081 tggggaggga attaggggat aggagtacta ggaattgtgt tattgttgga aagttttgag 001141 attgactttg tgtgtgcatg ttggacttgg acctttgaaa tttaccaatt taaagactga 001201 ctaataggag tagcccactg ttgtatttcc tgcgtaggcc tgaagtatca ttttcagctt 001261 accagaggca acatattttt tctatggtta gtggtagaaa gacagccaca ggggaagtga 001321 attagagaat aggccatatc ttcatagcca gccctagaaa aactcagctt cttctgaaga 001381 ggtgaattaa atttggatgg tcataaatat tccgttataa ttaaactagt ggattttccc 001441 atgcaaatat gagaggagct agatttaaaa ttagagttat attttgtata gaatttactg 001501 gtcaacctgg accgttgtaa tctagaccca ccactataat aaacgggcat atatttatct 001561 tttttccccg attaatgtcg ttattctagg cttctagatt gaacgtggtg gcaccctttt 001621 gcaccctctt tattataaca taatagatca attgatactt ccctaaaaaa ggttcataca 001681 aaaagttgct cagatactgc ttttgctgaa ccatagactg gttgacacag gcatacacaa 001741 atgcatgctc atgccttttt ttggaagttt tttcaaacta aaactgatcc attttgtttg 001801 tatcctactg cagaaagaga agtgtttaat ttcaggtttt agtgctccaa ttatgcaggg 001861 gaggcttttg ggagttatac cagttacggg tgtttgtaga aaacgatcgg attaggcaaa 001921 ttttggagta gaagtcctta gataatgcac ctgctttatt gccatcagct aagattgtgt 001981 atcaagtcaa attctacttt tcaaatctgg ctataaattc aattgtatgt acggaaagtt 002041 ggaaacatga gctaagattt gtacatcaag tccaattcta cttttaaaat atagcttgca 002101 caaaaaatgg ctattttgca ttattacata aaacattact tccaaattgg cgatcctgta 002161 ttctgaaaga tgtattggaa cttttttttt gtcatgtgca cgtgctgcag gttggctgca 002221 gacagaaggc agcagcccga gtagcgattt ctggctgcag tatattactt caataccaag 002281 ttatcattta attatgaagt gcactaagct gttgctttct atgtacatgt aagcttatct 002341 atgagataaa aaaacaaaca aacaaaaaaa gcccgtggtt aggatggctt gcggcattca 002401 gctaagtcga gaaaaatgcc cctgaacgtg gcacgtcact gggcatgctt aacctcacgc 002461 ggggagcact cttctaccag cattaacgag gggggatttt ttttgtgcaa aacctgggct 002521 tgagccttgg tcggtgtccc ctctaccaga gactctacca ctgtgctaca cacacgtttg 002581 ttcagcttat ctatgagata aattattaga atcctctaca taagttatta gaattatgca 002641 aagtctcctc cattgcttcc ttctattgat ctattatatg tccatcttcg tctaaagccc 002701 tttactagtc actattcaag tcatcattag cttgctgttc atccccatta cacactctaa 002761 ttttcatttt aagggaaatg catgttggtc tgcctcctta aaaaaccacc atgtttgagc 002821 gtttaaatgg caaaaacact tgagctataa cattaagcca tcatgaataa gatagatctc 002881 tttgtcaagt cattttcata tggtatttcc tggtccatgc aatatgtttg ttcttgcttt 002941 ggttggtctg gacatagttg atttacttat tttatctact cctataagat atttggagct 003001 ggtctgttgt atttcacata tccagcaagc tcttgtgttt gcacatcgat gctccaaaag 003061 gcaataactt gtctcaactt cctacttatg tgatgcagat tgttgccata agggatatca 003121 tacctcctcc acaaaggaat tcattcaatg acgtttatat tgcatatgaa ttgatggata 003181 ctgatctgca tcaaattatt cgctcaaatc aagcattgtc agaggagcac tgccaggtac 003241 cttcttcaaa agaaaaacac aactttattt ccactttagc atttatttca tacaaatggc 003301 ttttctggtc tgcttggatt ctcttgcttg tctaggcctc tgctcaaatt gagttttcaa 003361 gacctaaaaa gtgggaagta ttgaagtatg tattgatggt ttataaatgt tttgtgtaag 003421 aactataagg aatttggtac aaaaggttga atgtaaagct tttatggtaa ttttgtatca 003481 cattttaaga attctgcagg tatgcataat ctttgaaatt aagaaacgaa tttagcgacc 003541 tactaatata cctgaacgta cctttgccct gcaaagcata tatgcaaagt gctacaatta 003601 ggttatctca gtgcaccatt gatcattgga tcaaactaac gttttctttg gagataccat 003661 attatttgct aaccgatata aaatcgaata atgagttgat tgctatttat cagtagacca 003721 catactgtta ggagctggcg gcaaggcacc gcagctccga aggttgtagc agtgcttgac 003781 gggagggtga tgccgatgcc ctcgcctccc acaaagccat ggtgaggaga aacagagaaa 003841 agagtggcct tatataggcg attacaatct gctaatgaat cagaactaac tgaaacaaac 003901 ctcaaatctt aagggataac tcttatctaa tgcaagcaac agataacggc gagaacgaca 003961 ctgtggcgtg ccatgcacgc tcaccgaact cgtgttcttg agacattcaa aggattcccc 004021 acataacaca ttcaacgtga gaagggttca atgcccaatc acactggaga ggtcttgctg 004081 tattgcagct tgcaagctct tatgatcaat gctacagata gatctctccc tttcttgagt 004141 ggaactctag aatggctgcc tcacctatct ttccttatcc agataacttg attgtgttct 004201 cttgtatttt ccttgtgcat gcatctacca tgttctgaga aataatacat gtttggtata 004261 actgttcttg cgtaattctt tacctttttg tgcagtattt cctttatcag attctccgtg 004321 gcttgaagta tatacattca gcaaatgtcc ttcaccgaga cttgaagccc agcaacctac 004381 ttttgaatgc aaattgtgac ctcaaaattt gtgattttgg acttgctcgt accacctcag 004441 aaaccgattt tatgactgag tatgttgtca caagatggta tagggcaccg gaacttctgt 004501 tgaattcctc tgaatatact gcagcaattg atgtgtggtc tgtgggctgt atttttatgg 004561 aactcatgga tcgtaaacct ttgtttcctg gaagagatca tgtccatcaa ttacgtctac 004621 taatggaggt tagaacacac tcttatcttt tgaactttat tttatattga attgatcagg 004681 ttatgttgtg tggtcatata tttagcataa ctggagtact gttttggaaa tatataatat 004741 gttgattatc ctatgggaat atgttaaaac taaggaaaat gcaaagagga gagaatttat 004801 gttgctccag aaggtcctgg ctttctggct gatatgcagg atactgaatt ctgagtcatg 004861 gctattaata caaacgcatt tctcactaga ggatttatat actatctgtt tcacattatt 004921 gtgtgtttga ttttcctatc ataaatttct taattgcagc tcatcggaac gccaaatgag 004981 gctgatctgg attttgtaaa tgaaaatgca agaagataca ttcgccaact tcctagacat 005041 gcaaggcagt cctttcctga aaaatttcca catgttcatc ctttagcaat tgatctggtt 005101 gaaaagatgc tgacatttga tcctagacag agaataacag gtcagtattg gcatagtatg 005161 ttttagtgat ttaaagggca tttgaatgtt gtttttgcca tcttatctat cttgccaata 005221 gcaagtaaaa aataggcctt tctcctaaag aaagaaaaga gtgaaagaag cctttgaaag 005281 ccctcataaa ctatggtttt ttttaacacc atgtctacct ttcttttaat ctgccactgg 005341 ccatttctag ttagcgttta ccacttccta tctgttttaa gatagaaagt aacaactgca 005401 gtggatactt aaatatattt gtagagcatc tgtgcatgac ttctatatta ctaaatcaca 005461 tgcaaaccta aatatttttt ttaaaaaaaa aaactatgtc gatccttttt acctcttgat 005521 ccaccctaac ctaatccagg tggtataggt gtgtcatcac tttattctta atgcgtgaat 005581 tgagcatcat tcttaactca taggtgggaa tgttgaaaga gtcattgcct tgtggtgttt 005641 tctaatgttg aaaatgcatt gttccctgtg tcaaaacttt tgacctgatt ttctctgcat 005701 gtttcatatt actgaatgcc cccttatctt ttctcctatt tcttcttatc cagttgaagg 005761 tgcccttgca catccttacc tggcatcact gcatgacata agtgatgagc cagtctgctc 005821 atcacccttc agctttgact tcgagcagca tgcattgtcc gaggaacaaa tgaaggatct 005881 aatctaccaa gaaggccttg cgttcaaccc tgattaccag tagctggtgt tctatttcag 005941 ccttggattg attctattca tatggagttt tttcctcctg cgccacaaaa ggtcgccgac 006001 agtgatcact agttgtaaat aattgcctca cctgaaaaat cctccctggt tcaaagctga 006061 aggtgttgtt ctaagagtag aaatgtactt tgtgatcaag ttcctgggta gctgctatgc 006121 cattcttatg cttatgtatg ttgtttaatg tgggattttt ttccatctta aatgttttta 006181 gtcccttttg taagaagagt tagttcatga acgatgacgg cctaaattct gcggttatca 006241 tcaaattccc cattttcttg tc |
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| BJ464400 | bags34c14 | 644 |
| more... (Total Hit Count: 5 ) | ||
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| CJ686314 | whpc5g13 | 826 |
| more... (Total Hit Count: 30 ) | ||
