cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK111691
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0154500
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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2,805,559 -
2,811,925
( - );
6,367(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
2,805,559 -
2,806,177
( - );
619 (bp)
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Exon 2
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Location |
2,806,791 -
2,806,971
( - );
181 (bp)
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Exon 3
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Location |
2,807,303 -
2,807,635
( - );
333 (bp)
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Exon 4
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Location |
2,808,695 -
2,808,832
( - );
138 (bp)
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Exon 5
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Location |
2,811,390 -
2,811,519
( - );
130 (bp)
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Exon 6
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Location |
2,811,607 -
2,811,925
( - );
319 (bp)
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Chromosome: 6
, position: 2,805,559
- 2,811,925
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 attccgcctc cactttccct tcccttcctc ctccacctcc acctcctcgt cgcgatccaa
000061 atccgaatcc ggccatggac gccggggcgc agccgccgga cacggagatg gcggaggccg
000121 gcggcgggca gcagccgcct gctgcggctg cggcggcggg ggcgggggca ggggcgggga
000181 tgatggagaa catccaggcg acgctgagcc atggcgggag gttcatccag tacaacatct
000241 tcgggaacgt gttcgaggtc accgccaagt acaagccccc catcctcccc atcggcaagg
000301 gcgcctacgg catcgtctgg ttcgtttgct cccccctctc tcccattccg ttggcggcgg
000361 cggcctgatt ttggtttgga ttttggattt tgggtttgga tgacagctcg gcgctcaact
000421 cggagacggg ggagcaggtg gcgatcaaga agatcgccaa cgcgttcgac aacaagatcg
000481 acgccaagcg cacgctcagg gagatcaagc tgctccgcca catggaccac gagaatgtca
000541 gtgctcccga tccgctccat tgtttcgacc acggaattcc cttccccccc acccaccctc
000601 gatttttagg cgcagatttt gagattctcg ttgaatgctc ttgtctctgg ttagttaagt
000661 tggttgcatt aaatggggaa aggaggagga ggtgagggtt aggttaccaa atgattgagt
000721 tcgtcactgc tcggcctaat ttggtagagc ttttccctcc attcttgctg ctgatgatga
000781 gtgctgcgag cttcagaaat agaggtaact ttggagatgc ctttaaagaa gccatctgcc
000841 ttttggggat gttgttattc attgtgttct tgaatagtgg gggagcgagt gatgtgaaca
000901 gacctgacct ggagagtagc aacatcacat gattctcgta cgtgctgatg tcacaagcca
000961 caactagctt gaggaggagg aggaggagga ggaggaggag gaggaccaat ctggtgttac
001021 acctttttcc taagtcagtc aaatccagtc tgaatgcagt gggagtgact gccagtgggg
001081 agggaattag gggataggag tactaggaat tgtgttattg ttggaaagtt ttgagattga
001141 ctttgtgtgt gcatgttgga cttggacctt tgaaatttac caatttaaag actgactaat
001201 aggagtagcc cactgttgta tttcctgcgt aggcctgaag tatcattttc agcttaccag
001261 aggcaacata ttttttctat ggttagtggt agaaagacag ccacagggga agtgaattag
001321 agaataggcc atatcttcat agccagccct agaaaaactc agcttcttct gaagaggtga
001381 attaaatttg gatggtcata aatattccgt tataattaaa ctagtggatt ttcccatgca
001441 aatatgagag gagctagatt taaaattaga gttatatttt gtatagaatt tactggtcaa
001501 cctggaccgt tgtaatctag acccaccact ataataaacg ggcatatatt tatctttttt
001561 ccccgattaa tgtcgttatt ctaggcttct agattgaacg tggtggcacc cttttgcacc
001621 ctctttatta taacataata gatcaattga tacttcccta aaaaaggttc atacaaaaag
001681 ttgctcagat actgcttttg ctgaaccata gactggttga cacaggcata cacaaatgca
001741 tgctcatgcc tttttttgga agttttttca aactaaaact gatccatttt gtttgtatcc
001801 tactgcagaa agagaagtgt ttaatttcag gttttagtgc tccaattatg caggggaggc
001861 ttttgggagt tataccagtt acgggtgttt gtagaaaacg atcggattag gcaaattttg
001921 gagtagaagt ccttagataa tgcacctgct ttattgccat cagctaagat tgtgtatcaa
001981 gtcaaattct acttttcaaa tctggctata aattcaattg tatgtacgga aagttggaaa
002041 catgagctaa gatttgtaca tcaagtccaa ttctactttt aaaatatagc ttgcacaaaa
002101 aatggctatt ttgcattatt acataaaaca ttacttccaa attggcgatc ctgtattctg
002161 aaagatgtat tggaactttt tttttgtcat gtgcacgtgc tgcaggttgg ctgcagacag
002221 aaggcagcag cccgagtagc gatttctggc tgcagtatat tacttcaata ccaagttatc
002281 atttaattat gaagtgcact aagctgttgc tttctatgta catgtaagct tatctatgag
002341 ataaaaaaac aaacaaacaa aaaaagcccg tggttaggat ggcttgcggc attcagctaa
002401 gtcgagaaaa atgcccctga acgtggcacg tcactgggca tgcttaacct cacgcgggga
002461 gcactcttct accagcatta acgagggggg attttttttg tgcaaaacct gggcttgagc
002521 cttggtcggt gtcccctcta ccagagactc taccactgtg ctacacacac gtttgttcag
002581 cttatctatg agataaatta ttagaatcct ctacataagt tattagaatt atgcaaagtc
002641 tcctccattg cttccttcta ttgatctatt atatgtccat cttcgtctaa agccctttac
002701 tagtcactat tcaagtcatc attagcttgc tgttcatccc cattacacac tctaattttc
002761 attttaaggg aaatgcatgt tggtctgcct ccttaaaaaa ccaccatgtt tgagcgttta
002821 aatggcaaaa acacttgagc tataacatta agccatcatg aataagatag atctctttgt
002881 caagtcattt tcatatggta tttcctggtc catgcaatat gtttgttctt gctttggttg
002941 gtctggacat agttgattta cttattttat ctactcctat aagatatttg gagctggtct
003001 gttgtatttc acatatccag caagctcttg tgtttgcaca tcgatgctcc aaaaggcaat
003061 aacttgtctc aacttcctac ttatgtgatg cagattgttg ccataaggga tatcatacct
003121 cctccacaaa ggaattcatt caatgacgtt tatattgcat atgaattgat ggatactgat
003181 ctgcatcaaa ttattcgctc aaatcaagca ttgtcagagg agcactgcca ggtaccttct
003241 tcaaaagaaa aacacaactt tatttccact ttagcattta tttcatacaa atggcttttc
003301 tggtctgctt ggattctctt gcttgtctag gcctctgctc aaattgagtt ttcaagacct
003361 aaaaagtggg aagtattgaa gtatgtattg atggtttata aatgttttgt gtaagaacta
003421 taaggaattt ggtacaaaag gttgaatgta aagcttttat ggtaattttg tatcacattt
003481 taagaattct gcaggtatgc ataatctttg aaattaagaa acgaatttag cgacctacta
003541 atatacctga acgtaccttt gccctgcaaa gcatatatgc aaagtgctac aattaggtta
003601 tctcagtgca ccattgatca ttggatcaaa ctaacgtttt ctttggagat accatattat
003661 ttgctaaccg atataaaatc gaataatgag ttgattgcta tttatcagta gaccacatac
003721 tgttaggagc tggcggcaag gcaccgcagc tccgaaggtt gtagcagtgc ttgacgggag
003781 ggtgatgccg atgccctcgc ctcccacaaa gccatggtga ggagaaacag agaaaagagt
003841 ggccttatat aggcgattac aatctgctaa tgaatcagaa ctaactgaaa caaacctcaa
003901 atcttaaggg ataactctta tctaatgcaa gcaacagata acggcgagaa cgacactgtg
003961 gcgtgccatg cacgctcacc gaactcgtgt tcttgagaca ttcaaaggat tccccacata
004021 acacattcaa cgtgagaagg gttcaatgcc caatcacact ggagaggtct tgctgtattg
004081 cagcttgcaa gctcttatga tcaatgctac agatagatct ctccctttct tgagtggaac
004141 tctagaatgg ctgcctcacc tatctttcct tatccagata acttgattgt gttctcttgt
004201 attttccttg tgcatgcatc taccatgttc tgagaaataa tacatgtttg gtataactgt
004261 tcttgcgtaa ttctttacct ttttgtgcag tatttccttt atcagattct ccgtggcttg
004321 aagtatatac attcagcaaa tgtccttcac cgagacttga agcccagcaa cctacttttg
004381 aatgcaaatt gtgacctcaa aatttgtgat tttggacttg ctcgtaccac ctcagaaacc
004441 gattttatga ctgagtatgt tgtcacaaga tggtataggg caccggaact tctgttgaat
004501 tcctctgaat atactgcagc aattgatgtg tggtctgtgg gctgtatttt tatggaactc
004561 atggatcgta aacctttgtt tcctggaaga gatcatgtcc atcaattacg tctactaatg
004621 gaggttagaa cacactctta tcttttgaac tttattttat attgaattga tcaggttatg
004681 ttgtgtggtc atatatttag cataactgga gtactgtttt ggaaatatat aatatgttga
004741 ttatcctatg ggaatatgtt aaaactaagg aaaatgcaaa gaggagagaa tttatgttgc
004801 tccagaaggt cctggctttc tggctgatat gcaggatact gaattctgag tcatggctat
004861 taatacaaac gcatttctca ctagaggatt tatatactat ctgtttcaca ttattgtgtg
004921 tttgattttc ctatcataaa tttcttaatt gcagctcatc ggaacgccaa atgaggctga
004981 tctggatttt gtaaatgaaa atgcaagaag atacattcgc caacttccta gacatgcaag
005041 gcagtccttt cctgaaaaat ttccacatgt tcatccttta gcaattgatc tggttgaaaa
005101 gatgctgaca tttgatccta gacagagaat aacaggtcag tattggcata gtatgtttta
005161 gtgatttaaa gggcatttga atgttgtttt tgccatctta tctatcttgc caatagcaag
005221 taaaaaatag gcctttctcc taaagaaaga aaagagtgaa agaagccttt gaaagccctc
005281 ataaactatg gtttttttta acaccatgtc tacctttctt ttaatctgcc actggccatt
005341 tctagttagc gtttaccact tcctatctgt tttaagatag aaagtaacaa ctgcagtgga
005401 tacttaaata tatttgtaga gcatctgtgc atgacttcta tattactaaa tcacatgcaa
005461 acctaaatat tttttttaaa aaaaaaaact atgtcgatcc tttttacctc ttgatccacc
005521 ctaacctaat ccaggtggta taggtgtgtc atcactttat tcttaatgcg tgaattgagc
005581 atcattctta actcataggt gggaatgttg aaagagtcat tgccttgtgg tgttttctaa
005641 tgttgaaaat gcattgttcc ctgtgtcaaa acttttgacc tgattttctc tgcatgtttc
005701 atattactga atgccccctt atcttttctc ctatttcttc ttatccagtt gaaggtgccc
005761 ttgcacatcc ttacctggca tcactgcatg acataagtga tgagccagtc tgctcatcac
005821 ccttcagctt tgacttcgag cagcatgcat tgtccgagga acaaatgaag gatctaatct
005881 accaagaagg ccttgcgttc aaccctgatt accagtagct ggtgttctat ttcagccttg
005941 gattgattct attcatatgg agttttttcc tcctgcgcca caaaaggtcg ccgacagtga
006001 tcactagttg taaataattg cctcacctga aaaatcctcc ctggttcaaa gctgaaggtg
006061 ttgttctaag agtagaaatg tactttgtga tcaagttcct gggtagctgc tatgccattc
006121 ttatgcttat gtatgttgtt taatgtggga tttttttcca tcttaaatgt ttttagtccc
006181 ttttgtaaga agagttagtt catgaacgat gacggcctaa attctgcggt tatcatcaaa
006241 ttccccattt tcttgtcgat tcatggattt ctcatggttt tacttaatgc tccatgttgt
006301 aagacgtggt caatggaaga ggatatattg actcttgatt cagtggtggc agtttggagt
006361 tgatcgt
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.