cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK073837     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0705200 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 30,962,728 -  30,963,933  ( - );   1,206(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 30,962,728 -  30,963,095 ( - );   368 (bp)
Exon 2 Location 30,963,194 -  30,963,634 ( - );   441 (bp)
Exon 3 Location 30,963,748 -  30,963,933 ( - );   186 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum
Os01g0705200 Os01t0705200-01 210014 J033070H10 11813 LOC_Os01g50910.1 AK073837 18222
Os01g0705200 Os01t0705200-01 210014 J033070H10 11813 LOC_Os01g50910.2 AK073837 18222


Chromosome: 1 ,  position: 30,962,728 - 30,963,933 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 acaaggcaag aggcaagagg caagagcatc cgtattaacc agccttttga gacttgagag 
000061 tgtgtgtgac tcgatccagc gtagtttcag ttcgtgtgtt ggtgagtgat tccagccaag 
000121 tttgcgatgg cttctcagca ggaacgggct agctaccacg ccggcgagac caaggcccgc 
000181 gccgaggtga ggtttccctt cgtgcatccg cgcgcgcgca ccgcacgtac accaccacgt 
000241 ttgtcccatc cgttgcgcgt gcgcttacat ttgttgtttg cttgtttcgt gcgttgcagg 
000301 agaagacggg gcgcatgatg ggcacggcgc aggagaaggc gcgggaggcc aaggacacgg 
000361 cgtccgacgc cgcggggcgc gcgatgggca ggggacacgg cgccaaggag gcgaccaagg 
000421 agaaggcgta cgagaccaag gacgcgacca aggagaaggc gtacgaggca aaggacgcgg 
000481 cctccgacgc caccggccgc gccatggaca agggccgcgg cgccgcgggc gccacgaggg 
000541 acaaggcgta cgatgccaag gacagggcgg ctgacacggc gcagtccgcc gccgaccgcg 
000601 cccgcgacgg cgccgggcag accgggagct acattggaca gaccgccgag gccgccaagc 
000661 agaaagcggc cggcgccgcg cagtacgcca aggagaccgc gatcgccggc aaggacaaga 
000721 ccggcgccgt gctccagcag gttcattagc actcgcagat cgtgttcttt tcctaaccat 
000781 tctattttgt taaacattca tgctaattgc tgcaaaaaaa cgctctcttg gtgtgcaggc 
000841 aggggagcag gtgaagagcg tggcggtggg ggcgaaggac gcggtgatgt acacgctcgg 
000901 gatgtcaggc gataacaaga acaacgccgc tgccggcaag gacaccagca cctacaagcc 
000961 tggaactggg agtgactacc agtaatacgg tataagaagc atgtgtcgtc tttggcactg 
001021 atgccaaagt gtacgtgttg tatcctcttt tttaagtttc agctcgactt cgacgtgttc 
001081 ggtgtcacac tttggttttt cagttgtgct caactgttca tgtttctggt tccatggagg 
001141 gccagtgtgg aggtcaatgt ttaagctttc gttttaaaat ctgataataa agttggttaa 
001201 gacctg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BY851248 bast36h06 284
more... (Total Hit Count: 2 )
/rice/oryzabase