cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK103327
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0196700
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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4,925,020 -
4,931,613
( + )
;
6,594(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
4,925,020 -
4,925,538
( + )
;
519 (bp)
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Exon 2
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Location |
4,925,790 -
4,925,902
( + )
;
113 (bp)
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Exon 3
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Location |
4,925,994 -
4,926,089
( + )
;
96 (bp)
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Exon 4
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Location |
4,926,187 -
4,926,243
( + )
;
57 (bp)
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Exon 5
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Location |
4,926,329 -
4,926,484
( + )
;
156 (bp)
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Exon 6
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Location |
4,926,586 -
4,926,670
( + )
;
85 (bp)
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Exon 7
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Location |
4,926,911 -
4,927,001
( + )
;
91 (bp)
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Exon 8
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Location |
4,927,080 -
4,927,529
( + )
;
450 (bp)
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Exon 9
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Location |
4,927,777 -
4,927,915
( + )
;
139 (bp)
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Exon 10
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Location |
4,928,371 -
4,930,058
( + )
;
1,688 (bp)
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Exon 11
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Location |
4,930,759 -
4,930,949
( + )
;
191 (bp)
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Exon 12
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Location |
4,931,034 -
4,931,613
( + )
;
580 (bp)
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Chromosome: 6
, position: 4,925,020
- 4,931,613
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 ggcttcctcc tccacttgct tcgtcgtcgt cgtcctcctc ctcctctctc tactctctct
000061 ctccgaacca tccttcccac ccggcacgcc gccgcgcgct gttcccgacg gcggccggtg
000121 gccggagtga gaggctgggt gtactgtccg ctgatgctcg tgggaggcgg cggcggcggc
000181 ggcggcgtgt gatgagcgga ggccgcgtgg gcgagaacct gtcgcgtcgg cacggcggcg
000241 gcggcggtgg cgagggctcg tcaggcttgg ccacgctttg ctcccttcgc agtggcgctc
000301 ccctggtgcc gaatattata ctcgccgccg cctcgtgccg cctactttag gcggaaaggg
000361 ggagagctct cctatcctag ctgctgctgc tgccactggc taagttggta aaaggtggag
000421 gaggcggata ttcgtgtatc cggaggagag atttggatcg ggatctcgcc gggatgaagg
000481 atcagggatc atccggtgtg tctcccgccc caggggaagg tgagaagaat ccttttgctc
000541 tttgctcatg tgcttgcttc ctttgcattg ttcagaaaaa ttcaggtcgt tttgcttgag
000601 catttgccga attcatggcc atcatcgttg ccgcagcgca catttgcagt gaaaccttgc
000661 tcatggcctc ctcctcctcc tccctatgaa tcttatcgca ttagcgtgtg ctgtgtagtg
000721 tgaggttgga tacactgctg taacaactga gcatgggttt tgcaaagcag gggagaagaa
000781 agccatcaat tcggagctat ggcatgcttg tgccgggcct cttgtgtcgc tgccgccggt
000841 gggcagtctc gtcgtgtact tccctcaggg tcatagcgag caggtgaaca attttgtcat
000901 cttactgtct gaaatgtgct gaatcgtgac aagtttctga aaattttctt gttttctggt
000961 atgcctttgt ttaggttgct gcttccatgc acaaggagct ggacaacatc cctggttatc
001021 cctctcttcc gtctaagctg atctgcaaac ttctgagtct caccttacat gtatgtgcat
001081 agtactttcc actttgatgc tatagttgtg tttttccttt ttcatctttg ctaattgggt
001141 gcgcgcaaca tgttttttat tgttcaggca gattctgaaa ctgatgaagt ttatgctcag
001201 atgacacttc aaccagtcaa taaagtatgt aagatgatga tctatttgat tatgggaaca
001261 cactatttat ctccgtgaaa ttgaaatatg ttttctggat gtgttttagt atgatcgaga
001321 tgcaatgctg gcatctgaac tgggcctgaa gcaaaacaag caaccagcgg agttcttttg
001381 caaaacgctg acggcgagcg acacaagtac ccatggtgga ttttcagtgc cacgtcgtgc
001441 ggcggagaag atatttccac cactagtatg cagagtttct tcataaccct tgcagtaatt
001501 ttgatggaac tatgcattta tcagatgcag tgaatacctg ccttaccagg ataacatgtt
001561 cgataggact ttaccatgca accaccagca caagagctca tcgccaagga tctgcatgat
001621 atttcatgga aatttcgaca catttaccga ggtatgccaa actgctaact gctcagagaa
001681 tatctgtaca ttgacttggt tttatattta tttcattgcc acattttttt tgacagaccc
001741 attacttaca cttagttagc actttgcatc tagttttcct gctttttctt tgaactgcta
001801 aggatgtctc tgtcctggga catggtggcc gatcaatcaa ttgcattctg tacttacctg
001861 tatactactg taccttcaca tggacacgca ggtcaaccaa agaggcacct tctgacaact
001921 ggttggagcg tctttgtcag cacaaaaagg cttctagctg gtgattcagt tctgtttata
001981 aggtagcaca ctgaaattca agtgcatcga tttgtctaaa tcgtttcaag aaatattgat
002041 tctacatctt ttgtttgcag ggatgagaaa tctcagcttc tattaggcat acgtcgtgct
002101 accagacccc aaccagctct atcgtcatca gttctatcaa gtgatagcat gcacattggg
002161 attctagctg ctgcagcaca tgctgctgca aacagtagcc catttactat tttctacaat
002221 ccaaggtatt atagttctta cttgatatcc cattatccca atgcactctc tgctaccctt
002281 tgggactatg aactcattgt tgttattctg atagggcaag tccatcagaa tttgtcattc
002341 ctttagcgaa atataacaag gctttgtata cacaagtatc tcttggaatg cggttcagaa
002401 tgctgtttga gacagaggat tcaggggttc gaagatatat gggaacaatc acaggtattg
002461 gtgacttgga tccagtgcgc tggaagaact ctcattggcg aaaccttcag gtgtgctact
002521 cttttcttct tttagttctg caatgtgtca cattcataca tctcattctc atctatgatc
002581 tgtaagaaat aacaaaatat ctggattaat tatttgtatt aaattagaaa attcaacctc
002641 attttgaaga aatctttgaa ataagattgc ctaacaccct atagaattgt tgtttgcaag
002701 tttgtttagc atattataca aaaccttccc tgacttcacc tcctctttct aagttaggtt
002761 ggttgggatg aatcaacagc atctgagagg cgcactcgtg tttcaatatg ggagattgaa
002821 ccagtcgcga caccttttta tatttgtcca ccaccatttt tcaggccaaa acttcctaag
002881 cagccaggaa tgccaggtac agatacttcc actcaacatt atatatatat tagctagtat
002941 tactatttag ggaatagtgt aatatgcaga tcattttgat ctttgggaat tagtgcttca
003001 atcatacagt cattctcttc ttgctgaact cattaagctt gtaaagaaca ctgcaaccta
003061 attttcacca acgtgcatac gcattatact aaaaatggtt tgcttcttgc atgcatatga
003121 acttgatgca tctgttaaca gcaagaggtt ctagccaaag cacataaaca cacttcaatt
003181 ctcttaaatg tagttgcttc ttgattgtgt ataaacttga aatattaata atcagcaaga
003241 actgtggatt tgttgtttgt tacctgtgta caagttaact tccttgcaaa ttttgcttgc
003301 attttcttaa gattagtttg ggcctcatat gaaaattgct aaaacttgca gatgatgaaa
003361 atgaagttga gagtgctttc aaaagagcca tgccatggct tgctgatgac tttgccctga
003421 aagatgtgca aagtgcatta tttccaggtc tgagcctagt ccaatggatg gctatgcaac
003481 agaatcctca gatgctaaca gctgcgtccc aaacagtgca atcaccgtac ttgaactcca
003541 atgcattggc tatgcaggat gtgatgggta gtagcaacga ggacccaaca aaaagattga
003601 acacacaggc acaaaatatg gttttaccta atttacaggt tggctcaaaa gtggatcacc
003661 ctgtaatgtc tcaacatcaa cagcagccac accaactatc acaacagcag caggtccagc
003721 catcgcagca aagttctgtg gttttacagc aacatcaagc ccagttgctg cagcagaacg
003781 ccattcactt gcagcagcag caagaacatc tccagcggca gcagtcacaa ccggcacagc
003841 agttgaaggc tgcttcaagt ctgcattcag tggaacagca caagctgaaa gaacagactt
003901 caggtgggca ggttgcctca caagcacaaa tgttaaacca gattttccca ccatcttcat
003961 cgcagctaca acagttaggt ttacccaagt cacctactca tcgccaaggg ttgacaggat
004021 taccaattgc aggttctttg cagcagccca cactaactca gacatctcaa gtccagcaag
004081 cagccgaata tcagcaggcc ctcctacaga gtcagcaaca gcaacagcaa ctgcaactgc
004141 aacaactatc acaaccagaa gtacagctgc agctgcttca aaagattcaa caacaaaaca
004201 tgctatctca gctgaaccca caacatcagt cccagttgat tcaacaattg tctcagaaaa
004261 gccaggaaat tctacagcaa caaattttgc aacatcaatt tggtgggtct gattctattg
004321 gtcaactcaa gcaatcacca tcgcagcaag ctcctttaaa ccacatgaca ggatctttga
004381 cgccccagca acttgtcaga tcacattcgg cacttgctga gagtggggat ccatccagtt
004441 caactgctcc atccaccagc cgtatttctc caataaattc gctgagtagg gcaaaccaag
004501 gaagcagaaa tttaactgac atggtggcaa caccacaaat tgacaactta cttcaggaaa
004561 ttcaaagcaa gccagataat cgaattaaga atgacataca gagcaaagaa acagtcccta
004621 tacataaccg acatccagtt tctgatcaac ttgatgcatc atctgctacc tccttttgtt
004681 tagacgagag cccacgagaa ggtttttcct tccctccagt ttgtttggat aacaatgttc
004741 aagttgatcc aagagataac tttcttattg cggaaaatgt ggacgcattg atgccagatg
004801 ccctgttgtc aagaggtatg gcttcaggaa agggcatgtg cactctgact tctggacaaa
004861 gggatcacag ggatgtcgag aatgagctat catctgctgc attcagttcc cagtcatttg
004921 gtgtgcctga catgtccttt aagcctggat gttcaagtga cgttgctgtt actgatgccg
004981 gaatgccaag ccaaggtttg tggaataatc aaacacaacg gatgagaact ttcactaagg
005041 ttggtacagt tcttttgagg acacatttat tctggaccta catttgtctg cgatctttca
005101 aaattgtgaa aatgcacata tcaaaagcta ccttattggg tgcatacatg tctagcttga
005161 gaaagttttg cttgattcaa gatcagaggg ctaagttaga aaacctgaat tgttcttgtt
005221 agtaatcaat taatcactaa gttagatatc gcctgcatct tttttttgtg aactatcaat
005281 gtcgttgaat aggaccaatg aattttcgga tacatgtgtc attctatcgt ttgtgattta
005341 aaaaattgac aaccaatttg aacatgacaa gtgggccctg acccacagat gagcgtggca
005401 ttgactagca tttctcagac acaaactata gggtaacatg tagctagatg acccaccaat
005461 gattcctgac atcagttggc acatactaat aatgtaactc cagaaatgtt aaacgttgtt
005521 tgtgatattt ttgctgcctt tcatgtctat gttggtcatg ttttttgggg gaacatatgt
005581 tggtcaggtt tagcgagaac taaacatcct gcattcctgc tcatgttctg gagcatcatc
005641 atttattcca aatttctatg ccaaacaatg gcttaacgat ccaactatta tcctttattc
005701 tcaaactgtc ctcttatgtg gcaaactatc ttcatgaagg ttcaaaagcg tggttctgtg
005761 gggagatcaa ttgatatcac aagatatcga gattatgatg aacttaggca tgatcttgca
005821 tgcatgtttg gtatccaagg tcaacttgaa gatccatata ggatggattg gaagctagtc
005881 tatgttgatc atgagaatga tatccttctt gtcggcgacg acccttggga gtaagtgctt
005941 cccttccctc ctcttggatc caatacaatt ctatagctag cccctcctga tgatttagaa
006001 aacttgatat gcagggaatt tgtgggctgt gtgaagagca tcaaaatact ctcagctgct
006061 gaagtacaac agatgagctt ggatggtgac cttggtggcg tccctccaca aacacaggcc
006121 tgtagtgcct ctgatgatgc aaatgcatgg agaggttgag gttcctgaca gtaaatacta
006181 aattatcctt accattcttt ttaaggatac ttgagagact caaggatcaa atacacacct
006241 agggatctag agccaactca ctgacaaatt gatcaaaatg cttcgattag gcggaggatg
006301 ttcagtgaac cgccttgtta tggagctctt gacattttgt tcacactaaa actggcaacc
006361 tatcctcata gtcagattaa tttcttcttt tcttttcggc atacagaact gattttcagt
006421 ttcataagct acctatgttt atctgggact tgttcattgt aatcttacaa gttcataaac
006481 aatctgaccg tatatacatg ctgttgtatc tcccaatgta atactcggat gattctattg
006541 gtgtttccac tacagaagta aaaagttgta tggccaaagg cgttctattg tctg
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
