cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK102478
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0716700
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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31,321,506 -
31,327,437
( - );
5,932(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
31,321,506 -
31,321,943
( - );
438 (bp)
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Exon 2
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Location |
31,322,050 -
31,322,454
( - );
405 (bp)
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Exon 3
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Location |
31,323,033 -
31,323,183
( - );
151 (bp)
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Exon 4
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Location |
31,323,266 -
31,323,404
( - );
139 (bp)
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Exon 5
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Location |
31,323,481 -
31,323,646
( - );
166 (bp)
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Exon 6
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Location |
31,323,729 -
31,323,944
( - );
216 (bp)
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Exon 7
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Location |
31,324,045 -
31,324,226
( - );
182 (bp)
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Exon 8
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Location |
31,324,315 -
31,324,441
( - );
127 (bp)
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Exon 9
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Location |
31,324,877 -
31,325,015
( - );
139 (bp)
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Exon 10
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Location |
31,325,130 -
31,325,256
( - );
127 (bp)
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Exon 11
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Location |
31,325,404 -
31,325,515
( - );
112 (bp)
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Exon 12
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Location |
31,325,607 -
31,325,687
( - );
81 (bp)
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Exon 13
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Location |
31,326,233 -
31,326,386
( - );
154 (bp)
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Exon 14
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Location |
31,326,472 -
31,326,592
( - );
121 (bp)
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Exon 15
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Location |
31,327,294 -
31,327,437
( - );
144 (bp)
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Chromosome: 6
, position: 31,321,506
- 31,327,437
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gtcgagccgc ggcgaggcga cgaactcatc acctccactc tctgctgcaa cacgagtgaa
000061 tcggaggcgg cacgatgcgc aagtgggcgc tctcctccgc gctcctcctc ctcctcctcc
000121 tcctcaccac actccccgat ccaggcatgt ctctgtctgc ccccgccgcc ggaggcgttg
000181 tctgattttt cgcgattttt tgggtgtttt tctgtgggag tatagtgaat tttaggttgg
000241 aactctgtga tccgttagct ccggaggcga ccagtacaga ttcgatctca cttggtcacc
000301 ctttgattga ctctgctgtg attatttggt gccactactt cgagtaaggg agtgagatgt
000361 gatgactgat gaattggtag tttttttttt ttttgaaata gtgctcatag ttgtctgatc
000421 cgtttgtgtg gacgtgactt gtgctttgtg cgatctctgg tggtgattct agtctgattt
000481 ttgttttaga tctcgcttgt tgggttcgcg gccacttcga tctgttgtaa tggtagggtt
000541 tattgcgatt tcgagattta gctagttcta gatccgtaat ctgctattgc gcaccgtaat
000601 tttgtccgca atagggctca ttatatgcgg ggtttaaata gggtttagtc ctgagagtaa
000661 taatacatct gtatcaagtc agttcagtgt aaatctagtg ctgattgttg ttgatctagc
000721 gcccccaact tactgatctt agtgattttt aaaggcttct caagtctaat tcacacacat
000781 tgctctaccg caagtcaaca catgattcaa attattattc ggttctgacc cttcctgtac
000841 tgcagctaag aagctccaag tcaatgctga tgacagcact gatgagttag ttgatccgcc
000901 gaaggtagag gagaagattg gtggtgttcc ccatggcctg tccacggact ctgaggttgt
000961 tcagaggtgt gcacgatctt ctgatcaatg ctgatcgttt ccatcttatt gtgttgttga
001021 tatctgtatg agcaatatgg aatgtgtgca gggaggctga gtcaatctcg aggaagaccc
001081 tcaggagctc agcggagaaa tttgagttcc aggctgaggt gtccagactc atggacatca
001141 tcatcaactc actctacagc aacaaggaca ttttcctgag ggagctcatc tccaatgctt
001201 ctgatgtatg tagttgtatt gcattttgac tcccttttta gggcctattc agaacacagg
001261 aaaaggaaaa acacaggata ggaaaaacgt aggaatatga aaggaaatca cgttgaaaac
001321 ataggattga aaaacgcagg aatataaaag ttgagagcat tcggtttaca ggaaaggaaa
001381 taaaaagtaa tcgaggagta atctgtatac tgtatttatt atctaccgct atcttgctta
001441 tcccgtctgt cttgcttatt atctagtggc tgttttattg cttgattggc ttgattctgt
001501 caaagggaat gaaacaagag attggagtgg atggaatttt cctccgtttt tcctgtggaa
001561 tcagcagcaa aggatttttt cctacagttt tcccataacc actttttatg atccgaacga
001621 taggatagga aaaaatccca tgtgaacagt attcctatga aattcccggg aaaagcctcc
001681 aatccaaatg agcccttaag gttattagta gatgctagga atttaatgtg tgcttttttt
001741 ttatgtgtag gctttggaca agattaggtt cctggctctc actgataagg aggttttggg
001801 cgaaggtgac actgctaagc ttgaaatcca ggtatattaa acttcgtagc tgatagtctt
001861 ttttgtgtgg tatatcttgt tttggaaatt gacttcatgg catctgctgt gggcacgtgt
001921 agattaagct ggataaggag aagaagattc tctccattcg ggataggggt attggtatga
001981 ccaaggaaga tctcattaag aaccttggga ccattgccaa atctggaact tcaggtatta
002041 ctcctttgta ctgatttctc ttaaagttat gtgtattctc ttgctaaaac tttagtatta
002101 tctatttgtt tgtaaagaga attttaccaa gtgccattta acttaaactt gagtgatacc
002161 aattccttga aatttttgca gcttttgtgg aaaagatgca gactgggggt gacctcaatc
002221 tcattgggca attcggtgtt ggtttctatt cagtatactt ggttgctgac tatgttgaag
002281 tgatcagcaa gcacaatgac gacaaacagt aagacaccac tgaaatacag cggctacata
002341 ttgtgttttt ggttcatctt cttttccttc actggcatga caacctactt catgttctgc
002401 tgttgcactt tttctctgat aggcatgtct gggagtccaa agctgatgga tcattcgcta
002461 tctctgagga tacatggaat gaacccctgg gccgtggaac tgaaataaga ctgcacctcc
002521 gagatgaagc caaggagtac gtggaagaag acaagctaaa ggtattacca tcattactgt
002581 caattggctt catgctgtga catcaaatat gcgatatgca catgatagtg gtacttggtg
002641 tctgcattgt ctctgtgctt tatgcttgtc acctcggaat gtggatgtag ctttgctgca
002701 agcttcggat aggaattgtc atttcgcttg tttgcatata tggcttatgg ttagggttgt
002761 tcaacagctt ttttagcatg aattgctgcc tttggttgaa acctagtctg tataactagt
002821 agggacaaga gaccttttca ttagccctga atgtcattgc ttacaaggaa gtttagcatt
002881 acctttttgt aaattcattt tgctgcatag tctggcaaat ttctgttgaa tagctgctat
002941 tgagacatta tacaaagaaa ataacttact atcttgaaca tttcatggtc ttgcaggatt
003001 tggtgaagaa gtactctgag ttcatcaatt tccccattta cttgtgggca accaaggagg
003061 ttgatgtgga agtgccagct gatgaggatg agtcaagtga atcaagtgaa gaagaggaat
003121 catgtaagtt ttcagtttat gtttttatat cttttagatg atacgtaagt tatttgcaca
003181 taagtgctaa catattagct tttcttggca gcccctgagt ctacagagga agaagagaca
003241 gaagagagtg aagagaagaa gcccaagaca aagacagtaa aggaaaccac tactgagtgg
003301 gagcttctga atgatgtgaa ggctatatgg cttcgtagcc ctaaggaggt tactgaagaa
003361 gaatacacaa agttttacca ctcacttgct aaggtacaca gactgcagtg atgaatttac
003421 aggagcataa cattttatgt aagccttgca gaagaaagca agtaacctca tttaatatca
003481 aattattttg taggactttg gtgatgacaa gcccttgtct tggagccact tcactgctga
003541 gggagatgtt gagttcaaag ctttgctctt tgttcctccc aaggctccac atgatctcta
003601 tgagagttac tacaactcta acaagtcaaa ccttaagttg tatgttagaa gggttttcat
003661 ctctgatgaa tttgatgagc ttcttccgaa gtatctcagc tttttgaagg tactagatta
003721 ctatttcatg aacgacacgg tattccattc attgacttat gcagcctaaa cctataagct
003781 attatctgta gggtctcgtc gactcggaca cattgcctct caatgtatca cgagaaatgc
003841 tccaacaaca tagcagcctg aagaccatca agaagaaact aatccgcaaa gctcttgaca
003901 tgattagaaa acttgctgag gaagatcctg atgagtacag caacaaagat aagacaggta
003961 acaagttctc tgtggatcac aggtcatata ctgttattta tgatgtaatt ctcacataat
004021 cttctgtact cagatgaaga aaaaagtgca atggaggaga aaaagggcca gtatgccaag
004081 ttctggaatg agtttggaaa atcagtcaag ttgggcatca ttgaagacgc aactaacagg
004141 aaccgtcttg caaagcttct gagatttgaa aggtttgtct tctattctaa tgtccactaa
004201 ttgctgtagt tatatatgcg agggataata gaactgagtt tttatctgtt tcagtaccaa
004261 gtcggaaggc aaacttgcct ctcttgatga gtacatttca aggatgaagc cagggcagaa
004321 ggacatcttt tacattaccg gaagcagcaa ggaacaatta gagaaatcac cgttccttga
004381 gaggctaacc aaaaagaact acgaggtgtg ttaccgagag gcctcatttt tttacagtat
004441 cttatgtcat gcattctatg tttttttttt ttgaaaagaa tgtattctat ggtttctcct
004501 tatggttttt aatattacac attcatcgca ttgttgtact gtggtatttc tactcatgtc
004561 tatttactcc ctcaaaaata agtaggttga tttctggaat tgttaggctt agtgttagat
004621 ttacccattc aagattgcat aggtctatat gccaaagatt tttgactcag gaatcatgaa
004681 tctaatggac cataaccctg caccgaggtc actgtactat gtttcaatac gtgtaatggt
004741 acatattatt tctgatgtac cttagtttta ccatcctcta tatcgttgat aaacctccac
004801 actcctccgc ttttaaccta aaaattgcta tgtagtatga atgagggtaa aatcacaggt
004861 ttgcagaact tcattcagaa gccgggtact gcaccacatt tattgctttt ttatgagctc
004921 ctccaataga attactctgg atccctggag cttaactaat acttttgtta tcttttgttg
004981 caggttatct acttcactga ccctgttgac gagtacttga tgcaatacct catggactac
005041 gaggacaaga agttccagaa cgtctccaag gagggtctca aactcggcaa ggactctaag
005101 ctcaaggacc tcaaggagtc cttcaaggag ctgaccgact ggtggaagaa ggctcttgac
005161 accgagagcg tggactcggt gaagatcagc aaccggctga gcgacacccc ctgcgtggtg
005221 gtgacatcca agtacgggtg gagcgccaac atggagaaga tcatgcagtc acagaccctc
005281 tcggatgcca gcaagcaggc gtacatgcgc ggcaagaggg tactcgagat caaccccagg
005341 caccccatca tcaaggaact ccgtgacaag gtcgcccagg acagcgaggt actgaagctt
005401 attagatcga caaaaacctc actaatattt atcatttctt tgcttccaaa tacgtcgaaa
005461 aaaaaactta tggttttgtg caatcttgat gcagagcgag agcttgaagc agacggcgaa
005521 gctggtgtac cagacggccc tcatggagag cggcttcaac cttcctgatc ccaaggactt
005581 cgcctccagc atctacaggt cggtgcagaa gagccttgac ctgagccccg acgcggccgt
005641 ggaagaggaa gaggaggtcg aggaggccga ggttgaagag aaggaatcat ccaacatcaa
005701 ggaggaggcg gagccgtcgt cgtatgataa ggacgagctg tagtgatgtg tcgccaccaa
005761 ctgttgtttt tttatctagc tcttgtgtta ggttgtttaa aaatgtgatg gtttcgaggg
005821 acgtccattt ttccatgcga aaatgcatag taccatgata cggggatttt gtcgatgtac
005881 gtagtttgtg atactctagt tcaaattaat ggccgtctaa tttcgatcat cc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
