cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK100812
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0571100
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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23,000,356 -
23,004,349
( - );
3,994(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
23,000,356 -
23,000,566
( - );
211 (bp)
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Exon 2
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Location |
23,000,663 -
23,000,750
( - );
88 (bp)
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Exon 3
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Location |
23,000,973 -
23,001,059
( - );
87 (bp)
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Exon 4
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Location |
23,001,537 -
23,001,587
( - );
51 (bp)
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Exon 5
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Location |
23,001,686 -
23,001,730
( - );
45 (bp)
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Exon 6
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Location |
23,002,083 -
23,002,129
( - );
47 (bp)
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Exon 7
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Location |
23,002,203 -
23,002,267
( - );
65 (bp)
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Exon 8
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Location |
23,003,124 -
23,003,290
( - );
167 (bp)
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Exon 9
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Location |
23,003,362 -
23,003,430
( - );
69 (bp)
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Exon 10
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Location |
23,003,518 -
23,003,580
( - );
63 (bp)
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Exon 11
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Location |
23,003,705 -
23,003,822
( - );
118 (bp)
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Exon 12
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Location |
23,003,922 -
23,003,977
( - );
56 (bp)
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Exon 13
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Location |
23,004,065 -
23,004,349
( - );
285 (bp)
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Chromosome: 6
, position: 23,000,356
- 23,004,349
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 agtgcatcgc aaatatcaca tcaccgaatt ctcccgagct ccggcgacgt ggtcgcgcat
000061 tcctcttctc gccggcagac tcgccgccgt cctccgccgc ccctctcgcg gcgcagcgat
000121 tcgtctccct cctccgcaac cgcgcccgag ctcccccctc ctccccgcat ccggtggatg
000181 gcctcttccg cgccgtccgc ggcggcgggg gcgaccccgc cggaccccct ccgccgcgac
000241 cgcatcctct ccagcaagct ctacctcgac gtcccgggct ccaaggtcgg tcgccaccgc
000301 cgccaaggct agcagttgat tcctaccggt cgagtcgtca ccgcggttgc gtctgttctc
000361 tttcccctgc aggctccggt ggtgtactcg ccggcgtacg acatcgcctt cctcgggatc
000421 gagaagctgt gagctgcctt cccatgtatc cccctcacca tgtactactc cttgcacacg
000481 aagtctctca ctgcgcgctc gcggtggaca tggctgtggc tgtgcaggca cccgttcgat
000541 tcctccaaat ggggccgcat atgcaagttc ctcaccaagg aagggcacct ggagaagaac
000601 cgagtggtgg agccattgga agcgaccaag gacgatttgc tggtggtaag aacgggagcg
000661 attaggagaa gcaaagggat atctgtgttc tgtttggttc ggagtgcaga caccagtgtt
000721 tcttggcctg atatgttctg aattagttgt ttgtttttgc ttggaccagg tgcactcgga
000781 gtcgtacttg aacagcctca agagcagcct gaaggttgcg tccattgtag aggtactggt
000841 tgtttagtag aagtcagact ggcttgattg tctagaatta tgtgatgtgc gggtagctaa
000901 tgagattgtt gcatcatagc ttcctcctgt ggcattcatt cctaattggc ttgtgcagca
000961 aaagctactg taccctttca ggaaacaggt gatgccttgt ggtttggtgc tagaagttgt
001021 atagtttgag tatattgaag gctaattata ttttcttagg tgggtgggtc gattctatcg
001081 gccaagcttg cacttgagag aggatgggcc attaatgttg gcggagggtt tcaccattgt
001141 tcggcagagc aagggggcgg gttttgtgca tatgctgata tttctctctg cattcagttt
001201 gcttttgtcc gtctaaatat ttcaaggtga gaaaaccttt attgacagga ccacaacaac
001261 tgcatatatg tttgtttagt ttttggaact gttcgtatct gacacagaac tcgctcaaac
001321 atgtcagtaa tctgagaagt gtgtagtgct agtgcagtga tgcacttgtc cagaccattg
001381 tcattctgca agtgcacatg tccgagccca gctcggcaca gatgcactca tcttcctgcc
001441 agattaaatg ctaagcagaa ataacacttg cttcttctta ttataccatg attctaatgc
001501 ccttggtatc ccgcatttta gaaataccca tagcacattg tgataaaagc gtcgctgtgc
001561 atgcttgccc accagtgctc aagctctggt gcaggtgtgc tcacatttgt actatcatca
001621 tcaataccaa gtcccacctt tgtctcacat ttttttcttc aactgtcagt atattgtgca
001681 agtctacaag ctctctgttt tgccgctaaa aatgtaggga aaattttagc catcatactg
001741 cttatattct ccataagtca tgggttcgta tcctggaaat ttacacaaac tatcccccaa
001801 cccattgcat agattgctgg gaattaattt ccagttacat ccagagagat aaggtgccac
001861 accaggctat gctatctagc ttctataaac tatctgtatt attcctctgt catgtcaatc
001921 ctttttctta ctaggaaggt ttgggatact tgttggaatt taatattcga tgtgcttttc
001981 ttactactta ttgcattagt tggcagtgtt gcaagctttt atattcattc tatactgtta
002041 aatttatctt tatatgtgcc taaattgttc gaatcatttt agagtgatga tcatagatct
002101 ggatgcccac caaggaaatg gccatgaaaa ggatttcgct aatgatggta tgacctttac
002161 tttttctgca cattatcttt tcaatatata ggttattatg atgccaattt tctcttgcag
002221 gaagagttta cactttggat atgtacaatg ctggaatata tccctatgta agaataacat
002281 ctggagtata tgggtttgtg gttatacaag ttctgggttt attgtgtagg ctgtagggga
002341 cacacttttg cattttatca ggtttagaca accagtgttg aacatatatc aaaactgaaa
002401 ctcaaactgt ctatttctgc aatttataca aaactctcta ttcaaatgtt gtggtgttgt
002461 ttttttgaga cgaaaatgtt gtggtgttca atctaaaaat gctatgattt tcatgtaaat
002521 tttgaccaac ttaaagtcca gtccttgtca ttatcattcc cttttatcta ataccagcta
002581 ttttctgact tcctatgtaa attgacaact ccattttagg atcatgttgc taagcggtat
002641 attgatcaaa aagtcgagct agttgtaagt tgcctcatgg accctgctta ttacttaaac
002701 ttttcattta attcaaattt gagttagatt tctcattacg taattgtgat tgtgcattct
002761 agagtgggac aaagacagaa gactacttgg atcaacttga caaggctctt aaggtatctt
002821 acacttttaa tggcgtgatg ttgaaaactg gcagttacat gatgttttcc ctgtaccaag
002881 tgcagtttta aggagattta ttaggtcaag tataacattt tgaggtgaca atttttgatt
002941 gatatatgtc cagaatttta agtaaagtga acaaaaaagt gtttttttac tagttaagct
003001 tctgatgttg agttaaattg catccatggc gctgagtaag tttagcctct gtgctcaagg
003061 aagattgaaa tgtgaaaata aaatagtact tcatggccaa tgctttattg ccagtactgt
003121 ttctttatgt attggcagct taatgcactt ggaagttaga agcatacttt ctgttcttcc
003181 atatctttgc agaatggctg cgctttgaat catcattctt tgtgtattta tttttcagtt
003241 tttacctaac ttgttactta ccggttcctc ttggagcatg ttatttgcag gttgcagaaa
003301 gtagatttca gcctcagttg attgtttaca atgctgggac agatatcctg gatggcgatc
003361 cattgggaag attgaaggta acttttggaa caatacatat ttcacaaaaa aaatgtttgt
003421 taaagcaatc taatatgttc cctaccaaat ctggattctg ttccagtaat tcctgggttt
003481 catatctatc ttgtgaacaa gataaataag gaaaatgatc tgatgcagaa gtattaccta
003541 ccatgtacca gatcgttgtc taatccactg aacttaacat gatttctttc accttccaga
003601 taagccctca gggcgtggtg atcagagatg agaaggtgtt caggtttgca aaggatcaaa
003661 gcatcccact actcatgtta acatcaggta agtaccaaca catttatgga ttcttaagcc
003721 aatcacaggc aacctctatt gccatggtat tcatgtgcac actttccatc tgcccgttct
003781 caggaggata catgaagtcg agcgcccgag tgatcgccga ctcgataatc aatctctcga
003841 ataaaaactt gatagagctt ggtagccagc ttggctgaac gagtgcttag cctgaatcga
003901 cagatcgcag atctactgga tgtatatatc ctgtctataa gaggcttaca ctaatgtgat
003961 aatggtatta atataagcca caaaaatcgt tatc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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