cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK099764
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0498500
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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18,382,130 -
18,388,675
( + )
;
6,546(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
18,382,130 -
18,382,637
( + )
;
508 (bp)
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Exon 2
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Location |
18,383,688 -
18,383,881
( + )
;
194 (bp)
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Exon 3
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Location |
18,384,496 -
18,384,704
( + )
;
209 (bp)
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Exon 4
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Location |
18,384,787 -
18,384,889
( + )
;
103 (bp)
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Exon 5
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Location |
18,385,275 -
18,385,438
( + )
;
164 (bp)
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Exon 6
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Location |
18,385,701 -
18,385,839
( + )
;
139 (bp)
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Exon 7
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Location |
18,386,055 -
18,386,225
( + )
;
171 (bp)
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Exon 8
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Location |
18,386,309 -
18,386,445
( + )
;
137 (bp)
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Exon 9
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Location |
18,386,592 -
18,386,906
( + )
;
315 (bp)
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Exon 10
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Location |
18,387,519 -
18,387,658
( + )
;
140 (bp)
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Exon 11
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Location |
18,387,838 -
18,387,935
( + )
;
98 (bp)
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Exon 12
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Location |
18,388,022 -
18,388,675
( + )
;
654 (bp)
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Chromosome: 6
, position: 18,382,130
- 18,388,675
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 aggctgccgt gccatcctcc tcctcatttc ctctctcacc tctccgcgcg ccgcctctcg
000061 ccgccgcgga cgaaacccta gctaaaaccc tcctctccct ctccctctcc ctctcaccga
000121 gccgcgcggc ctcgccaagg accggcagcg atggggaaga gcagcagcaa gaagaagaag
000181 gacaaggtga tcctgccccc gcagctgccg ccggaggtgg acgacgacga cgtggtggtc
000241 tctgacgagg acgtcgagtt cttcaggggc aacgagggcc acgcccgcgc gctcgccacg
000301 ctcgacagga agtccatcga cagctacgtc accagggtcg cccaccacga cgaggacgag
000361 gtcgagcgcc tctacgagga gcgcgagcgc aggaggaagg cggtcgaggc cctcaggccc
000421 aagaaccacg acgacgacga cttcgaggtc gaccgcgtcg acgccctccc cgtcaagacc
000481 ctgcaagggg agctggtcta caacaacggt actatacttt tattttaatc ttatttgttg
000541 ttctgctgcc gcgacacact actaaatcga ttcaattctc actataattc aagtccttat
000601 tcgaatgcaa gaattcaatt ctcactctaa ttcatagtcc ttatgcaatg taagaattgc
000661 acatctcttc ctatagatac atactccctc catcccaaaa taaacaatcg atgtaacaca
000721 tcctagtact acgaatttgg acagggcatc ctgtactagg tttgtttatt ttgggacgga
000781 ttgagtaatt gggtaggaca tttcgatatt attgaatagt aaaagggtgt ggcaaactcg
000841 ttacttccaa atccactact ctcgttgtca cagttgcagt actgaggaga aaatgttgaa
000901 ctgcaaagcg aaatttgtct atgcattgcc aatgcctaat cacaaatgtt tgtatttgga
000961 atggtcccct gggaatgtaa atgattggaa taaactatac aagtggaaga aagactgacc
001021 gatctagcta taaaaactag ttgacatgtc caagggtact gaacaaattc actcggtaca
001081 ttgagcctag gtctttcggc cttttcattc gcaaatcatg cagtcctgtg taccaggttg
001141 aatgaattgg acattggatt tcagctggca agtacataga atccaccatt ctttttctat
001201 gaaagagcta aattttggcg cttatgctgt tatgcatgta tggtcatgta tccattgttt
001261 taaaggacta acgcatacta gtttgtatgg aactggctat aatgatcttt gcttccttaa
001321 ataaattaga tgttcagtgt aactgaaaga tcacggcaag accttctcca aatagtgaga
001381 gaaaaggcac aaatattgtt ctgtggatat taattttgat taagcacaga agaagctata
001441 tgcatcagtt tctatgtgtt actgaatgat gccttttgaa gcttaaagat gcctttgtca
001501 tatgcctatg ctacttggtg ctattctact tagttaacat atttgtattg ccgtgcagcc
001561 aagaaagcga gatttgatga cagttctaat aatgttgaat ctaaatctga agacaaagta
001621 ggaaattcca aacaaactat tcaaaaggga gaacggaagg aaaaatccaa aagcaaaaag
001681 ggagatggta aattgcaaaa tgtgcaagct caaactgaag cttcaaatgg aaaattacaa
001741 tcaaaagtgc tggtattacc ttgttctttt tttgcatcac agagattcat ttttcaacaa
001801 gccttttgct tatgatacat aattttaatg cctgttagga agacaagctg tctcgacctc
001861 cttgctttgg ttgttggaaa aaccatatgc tatgtactat atatatgcct tcttcataac
001921 ggtagcacaa aaaatatatg atttggcctt gcttgattgc aactttgtca gtatggaagt
001981 atcctatgca tcattgttga tcaacataca tccacatata taatttgact gtcatacctg
002041 tattagttta gtgctctctg gcttattcgt tgttgacatg aaacgctaag atttttcgag
002101 aaaacgctag gtcagatggt acggaactgt gaacatcaca gtatgtatat gagttctggg
002161 tattaaacta ttaatcatac agcctataga atgcagtgca agaataacca tggagaaaaa
002221 agcatgtttg taaaatgttg ggtcaatatt aaaacaaatg atgggcccac aatttcaacc
002281 cttcaagatc ttaaaatcac catgttgcta tttgttagtt aatgcttttt ttttcacata
002341 tgtcttgtac ttgctccgat tgacaggagg aggtgaagga ggaactttca gctgaggaat
002401 tatttgagaa aaagaaggcc cagctggctg aaatagggat gtctatgctt gaagatcctg
002461 aatcacatat tagatctcta aatgatatgt taaacatatg caatgacaaa gaccagaagg
002521 ttgttaaact tagtctgatg tccttgcttg ctgtgttcag ggacattatt cctaggtatg
002581 tgatggttga ttttcatttt gtattttgat tacatattaa ggtgtctttc tcatgcctca
002641 ttctctgttt gctgcagtta ccgcattagg cagttgacag aaaaagagct tacggtagag
002701 gtttcaaaag atgtaaaaaa gatgagatat tatgaataca cacttcttcg ctcctacaag
002761 gtttcattcc acctccttgc tttttaatta gtgacagaca ttatccttta ttctgtaatt
002821 ctctcatatg aattatgttt gaatggttcc atcatttatt ttgttgtttg aaattgattt
002881 gcatggggat gaatatggta caaaaacatt gagctacaaa aattctcaac ctttgcctgt
002941 tccccatatt ttttgtttgc ctcccaactc cccatgtaag aggattattg tcttgttgaa
003001 aaggtacaca taatgtgtat aacgtgcata tatcatgcca tgcactatag ccgaatgcag
003061 ttacattttc cttgcattcg gaagttagtt tcagaagtta tatttcttgg gtttgatttt
003121 cctttgctct tctatgcttt ttcaggcata cctgcaaaag ttaatctcct tggagaagca
003181 accaaatttt tccgctctgg ctgttcgttg catgtgtact ttactagata ctgctccaca
003241 tttcaacttc cgtgaaagta tacttgccag cgtggcaaga aatttaagtt ctccagatga
003301 tgcagtgagg ttgactacgt aacctgtatt aatttatatc aaaatcattg tttcctgtta
003361 gatgttgatt tagctgtgca actgatttcc ttgaataatg tcttgtgtag tttgatttgt
003421 ggatcatctg ttttttattt atttaatttt tgatcatctg atggtctaaa ttgtctactt
003481 aaaatgatgg gaaacactgg gttacctttt tagccaactg ttccatttaa tgttgtcctc
003541 acattcttgc atttccccca attctttgta ggaaaatgtg ttgtgaaacg ataaggtctc
003601 tatttgtaga tgaaggaaag catcgtggtg aggcaactgt tgaagctgtg agattgattg
003661 ctgatcatgt gaagctaaac gattgccagc ttcatcctga tagcattgag gtatgtgcca
003721 atatttgtat ttattacatg tgatatgtgg ttattatttg tcttgtcgca tcttcaccat
003781 gcaattaata tgttaatgga cttacttcac cagcttgggc cctatgggca gcagctcatt
003841 cctagctgct gaccactgcc ccatttcatc caacatagct gaaaatcaac tccatgtgct
003901 aatcgtggcc acttttttct gtaaggtctt cctatctttg agatttgatg atgatcttgg
003961 aaaagatgac acagaggaag aaaagggaaa accaaagaag aacaaacgac gacaaaacca
004021 ggaagtccca aagcaattgc cagtgagtga taataagaaa gccaaacagg aattgatctc
004081 aaaggctaga gaagaggtaa catttgttgc ataatttgat aggtatagct caaactgtat
004141 aagaaattca cttatttatt attattacta tttttgcagg ttgatgctga acttagatct
004201 gtttccttta ctcttgatcc aaaggaaagg agaaggatac agaaagaagc actctctgct
004261 ctttttgaga cttactttcg gattttgaag catagcatga gtatttcaaa ttccaggtat
004321 gtgcacttta atgttgtcac actagttttt gccataacaa tttcattact ggcattgtac
004381 cattcgagtt tatccaatat gataaacttt cacttacttt ggaataaagt tactatgctg
004441 acagtcatta tatcatcatc aggggcaagg tcattaatgt ctccccagat ggctcacacc
004501 cactacttgc tccatgtttg gagggtttag gaaaattctc acacttaatt gatttggatt
004561 tcatgggtga acttgtcgcg tgcctcaaga agctttctgg gtataccgac catcactctg
004621 gcacagtaca tgacaataca ctgtctgtat cagaacgtct gcagtgctgc atagttgcat
004681 ttaaagtctg gaggagcaac cttgaagctc tgaatgtaga cctgcaagac ttctttgtgc
004741 agctttttaa cctcattctg gagtatcggc ctgacaggtt tgaattctat ttattttggt
004801 gctggtgatg gggaagaaat atatatactc ttgtcctttc taaaacacag attcatggat
004861 aggtagcatc atagcaaatt tttcttccgt tattttttgc ttacattact tattgttggt
004921 cagtgtttca ccattgaaat gcttattatt actcataaat aactactccc tccgtttcac
004981 aatgtaagtc attctagcat ttcccacatt catattgatg ttcaatgcta gaatgactta
005041 cattgtgaaa cggaggaagt agttatgtac agctatacca cataaccatg ctgattactg
005101 acaatgcatt ttatcatgta ctccaatgcc gattataatg tataatagaa gaacattata
005161 cagtcttgca tatggtaagc accattttat taatgtggag gcagcagtga ccaacatgtt
005221 taattcatgg cttatggcgg tccactttgt gtcttccatc aacaatacac tttcagaatg
005281 ttttcgtgtt gtcatttttt ggtaaatcga atggtggtta tgtctaagat agctgttgca
005341 aagttttcaa gtaacttaag aacacaacct gatttctgtc tctatccaga gatcgtggtg
005401 aggtattagc tgatgctctg aagacacttc tctgggaagg caaacagcag gatatgataa
005461 gagcagctgc tttcattaaa cgcctagcaa cctttgcttt gtcctttggt tctgcagaag
005521 ccatggcagg tttgtgtttg ttttgccttg cactttccca gtctttctac cttgattgta
005581 gtccaaatat tagatccatt ggggtacgtt tgtttttcct tcctggacag tacataatat
005641 gtattaagta caaacatctg tttcatttcc tttgacataa ttgctgacat atttgaacaa
005701 tatttcagca ttaatcacac tgaagcatct tcttcaaaag aatagcaagt gcagaaacat
005761 gttggaaaat gattctggtg gtggctccct gtcttgctta gttgcggtat ttgtctaccc
005821 ttgtgttgtg caattcatca acatcaatta cagcttgtgt ttacctaata atgctacctt
005881 tcatttgtgc agaaatatga cccagaagct aaagatcctt atctgagtgg ggcacttgcc
005941 tcagtcctat gggagcttag ccttctgcag aagcattacg attcctctgt ttcctcaatg
006001 gcctcaaata tcttgagcat ggccaatttg aatcctacac agaatcctgt tccaatttca
006061 aatgcaagcc ctctagaagc atatagagac ttgtcaatgg aacggaaatt gtctaaacca
006121 gcgaataaat tgttgccact aaactgcaga aagaagaggc gtggtaagga gtttgttgcc
006181 ctaagccctg cagcgctcga gggatcagat tgcgttgcgg gtggagatga actcaaagag
006241 aagttaaaaa atcattttgc ggtactaaga ggtatctcag agaatgagag attgagagct
006301 gagctgaacc acacgttgtc atccatcaac ttgtacaagg aatacaagaa gcagaagaaa
006361 agcaggaaat caaaggctgt taagaaaaag gtttcaaggg cttaagttgt gctgcgtttg
006421 ggggaaattt ttgcacacca gggaccaaag gtgtgcagaa tgaacaattt tgccataccc
006481 actttgtagc ttatcgtagc ttttgggtgt aacacatttg cagttccaag catttctttt
006541 taagct
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
