cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK099441     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os06g0342200 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 6
RAP - Location, Length 13,753,424 -  13,754,170  ( + ) ;   747(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 13,753,424 -  13,754,170 ( + ) ;   747 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
Os06g0342200 Os06t0342200-01 210274 J013020M15 13319 LOC_Os06g23440.1 AK099441 40745 AP008212.2 255676632 BAF19485.1 113595611 NC_008399.2 297606578 NM_001064106.1 115467943 NP_001057571.1 115467944


Chromosome: 6 ,  position: 13,753,424 - 13,754,170 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 gaaaaaccgc atcccgcaac tccaccgctc ccaatctcga tcgaaacgcg agggtttcgc 
000061 atctccgccg acgcctagag gaagaaggga tccgccgccg gtagccaagc catgccgaag 
000121 aacaagggta agggagggaa gaaccgcaag aggggtaaga acgaggccga cgacgacaag 
000181 cgcgagctgg tgttcaagga ggacgggcag gagtacgccc aggtgacgcg gatgctcggc 
000241 aacggccgct gcgaggccat ctgcgtcgac ggcaccaagc gcctctgcca catccgcggc 
000301 aagatgcaca agaaggtgtg gatcgccgcc ggggacatca tcctcgtcgg cctccgcgac 
000361 taccaggacg acaaggccga cgtcatcctc aagtacatga acgacgaggc ccgcctcctc 
000421 aaggcctacg gcgagctccc cgacaccctc aggctcaacg agggcgtcga cgtcgacggg 
000481 cccgaggacg gcggcgacca cgacgactac atccagttcg aggacgagga catcgacaag 
000541 atctaagctc ttttcttctt tctccgcagc tacaatttac tgctatgttc taattaatag 
000601 ctatgtgtgg tactatgtgg gctggctgtt atggattgtt tggttgccgg tttcatcttg 
000661 tgatatgaga tatttgtcat ggtttgaggt ggttaaataa ttgttggatt ccgtaacttt 
000721 aatctggtat acatgatggt tatgcgt

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ465514 bags29i23 638
more... (Total Hit Count: 21 )
Hit Wheat ESTs
Acc. No. Clone Name Length
BJ290423 whsl18j22 650
more... (Total Hit Count: 286 )
/rice/oryzabase