cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK098865
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0298200
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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11,138,179 -
11,144,692
( - );
6,514(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
11,138,179 -
11,138,964
( - );
786 (bp)
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Exon 2
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Location |
11,139,512 -
11,139,816
( - );
305 (bp)
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Exon 3
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Location |
11,140,435 -
11,140,635
( - );
201 (bp)
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Exon 4
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Location |
11,141,864 -
11,142,546
( - );
683 (bp)
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Exon 5
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Location |
11,144,467 -
11,144,692
( - );
226 (bp)
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Chromosome: 6
, position: 11,138,179
- 11,144,692
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gcgtgttccc tctctctctc ctcttatcct tctcttctcc gtttgcttcg ctgctgctgc
000061 tgctgttcta cgcgcgcgac acggaagaga gaaaagtggt tttttattgg gttcctaagc
000121 cctttttgtt tccagaggct tctggattga tcggttgatc tctctccctt cccctctagg
000181 gtttcctggg ggtggatctg aggagcggcg gcgctccttc gtcccggtgc gtgatctctc
000241 tctctctcaa tctccgttga ggcgttggtt tccccgcttg gattctgcga ggttggtagt
000301 gtttgcgtcc gcgggggttt gcgctctggt ttggatttgg accgagttcg agtacttcgg
000361 agccctttcc tctgttggga ttcgttggct ttggggtgtt ctgcatgcat cggtcctttt
000421 acggaggatt tggggggttt tgttctgttt ctggctggct tcgatttttt actggctgag
000481 tgattgctgc ttcgtgtgta ctacggcgtt gttcgtgtgg ttggatttga tatgggttaa
000541 ttttggtttg gatttcgtcc ggggtcatgt aagtgagatt tcgggttaag tttgtgacga
000601 cagctctgaa gtttcttaca agatgttttt tttaacagta atcgactttt ctacgattgg
000661 ctattttttt cccctttgtt tcaatcagaa aataaatctt ttccccttta acaaatgggc
000721 gaagcatgtt tttgaattga atttgtggga ctgttttttt attcgatgaa ctaaaaaaag
000781 ttatggatct taggattgtt tttctttttt ttattcttcg tatgttgtca ctaaataaaa
000841 aaatttcagc ttttttctat tgtgaaatat attgtcaata tgttcttgct ttttttttcg
000901 tactatggtc taagaaactg gagttaaaat gaaagagaac tcggtctttg actaattcta
000961 caatttttta atgggacatc ttttctacat cttaaattcc atcgttttca taaaattttc
001021 tttcgtgcag cttttttttt cttgcttgcc atagctatta aaatctttag ttcctttttt
001081 ttaatcttta tccagacata gcttgcctag atgcaaaagt tgtgtgtttt gctatgcccg
001141 cctaaaataa catttatttt gccatgtcat caaacatttt tctttctgcc aatcctgcat
001201 gtccatgaaa acatttctta ataggcttcc ttaccctact ttttactgga gtactagtac
001261 tcaagactgc aattttttct tcaccttttc gtttaccttt ataaggcttt ttttctcccc
001321 tgatgctatg attttatcct gcaaattgac ccttcttttg gttttataaa aaagactagg
001381 atagctccgt ctttctttgc ttatatcgtt atttcagcct cttctgttag atatatttcc
001441 cccctatttc gagtgttcaa ctaatgcggc ttgtcgttcg ttgcttggag aaattgtgat
001501 aaaatatact attttcataa tgaaaccgat aattgtcgtt gactcgtaat gtagttattt
001561 tggttcttgt gataattttc tacatctctc tttttccctt gcaaacttag tacctatggg
001621 aatgggaata tatgctagaa gcaatgagtg aggtgctgga attatataat atgtgccaag
001681 agcaggagat tccaaagact agttgctgat acttttgtag tgggatttcg attttttatg
001741 cttcggttgg caaatggggg cggagtccac agattaatga gtccgttgaa acctaaagta
001801 gatggcggta atatgtccta attaggaaat atatctacat tatcctttag attatattat
001861 tgatagctga tgcaagacga cgctgagtgg aacatacttg ttgctacctg ttttgaacat
001921 ttctcttggt ttgaatgaaa actgaaaagg atggctacct agggtcctag gtcatagcaa
001981 ctgaaacagt aaaaaatata aaatctatgt tctcatgtag gtggatgccc ataaatgtat
002041 gaatattcat ttatgaatac tctacggttt tccaatagta tgtgggaata tttttttatg
002101 tgctggtact aatgttttct aataactgtt tgttgatact gtacaggttt atgtaaatct
002161 gatcgatcca gaaagtttgt gaaaaaagag tgtggcacat acctaaagct ggcttaaagt
002221 ttgcccatag ctaatatcat gggcgctctt tgtgatttct gcggggagca gaggtctatg
002281 gtttattgcc gatcagatgc agcatccttg tgcttatcgt gtgaccgtaa tgtgcattca
002341 gctaatgctc tttctcggcg ccatacaagg acacttctgt gtgatagatg tgcttcacag
002401 cctgccatgg tccgctgcct tgtagaaaat gcctcgcttt gccaaaattg tgattggaat
002461 gggcatagtg ctgggtcttc agctgctggt cataagaggc agaccataaa ctgctactca
002521 gggtgcccat catcttcaga actttcaaaa atctggacat ttgtttcgga tattcctaat
002581 gtagctcctg agccgaattg cgagcaaggg ataagcatga tgagcatcag cgacagtggt
002641 gtcagtaatc aagacaatgc tgcaggggac agcagtttgt tagatattgc tagtgcaacc
002701 cttatgagtg atcttggcac tgctggcaag ccaaagtctt tgataggctc ctcatctgaa
002761 gctggcgtga accttcttcc acttgctact gatcagatgg ctggatccgt ggattcgaca
002821 tcagctaagg tgctataagg ctttcacaca ttcctccata catagattta ctaattcgcc
002881 tcaattcacc tctgccgctg catatactac ccatatccca tggatgtaag ataatcgact
002941 gttttcctcc ctacagttgg ccattatcat ttgtttactc taccatatat gccatgattt
003001 tctttttctg tgtgtactct attttgaatg catattgtaa gtgagttcac ttaaatttct
003061 atacaagaaa aagaaataat ctaactgtta atgatgcata agcataagct tgtcaatgat
003121 tactttacca tatgtcatgg attttttctg tgtactccgt tttgaatgga tattgcaagt
003181 gagttcagtt aaatgtctat accaaaaaaa actgttaatt gtgcataagc ataagcttat
003241 cggggtagtg gatggtgcat ggaggttcaa taggctagca gaagttgctg aaactgtata
003301 catgcatgtg caatgagata tgaacattat gatgtgtatg gactacaatc tggatccact
003361 cagcagatat gaatagatga aacagggtaa taacagaata tggagtatag aaaatgtcta
003421 tattacagaa atagttatag gactatcgag aggtttagac aggtggataa ctatggtgct
003481 tatgttctta tgtcaagtct tgtcttccaa gtgttctgtg acctcatgca gatctacaaa
003541 tgcatattct cacaacatta aaatttggta caagtaatct tttaaaatta ttccttcaca
003601 atttctttgg aaaatgttaa gaacactgct ttgtattatt tggatgatgt agcatttcac
003661 attttagtct atctcgtatt ctaatttatc ttactggacc atagattccc atgacaggtt
003721 atttgtgtgg agaactttaa agattctata cagagagaat ttactttcgt ctttcttcaa
003781 atcactttct ctgtacagca tttgcaaatt ttcaggccgt tttacttcaa tcttccacta
003841 caccatgttt cttttttaga gagcataaga cacacacaca cacacacaca aacacattct
003901 tccacataca ttcacaccgt gtgtgcgtgt aagcacccta tgcacacaca aggcttcacc
003961 caggacatgc tttctctctt aatccacacg tgtgcatgct ccatgcttct tcaaaattag
004021 tttgtcacta atctgtgttt atggtctcct tatgcaggtg ccctatacgg cagaccaaga
004081 tatgttcagc aaagacagta tatatgaaga tttctgtgtg gacgatgttg atcttagttt
004141 cgaaaattat gaggaactat ttggcacctc ccatattcaa acagagcaac tgtttgatga
004201 tgctgggatc gacagttact ttgaatcgaa ggaaatacct tctggaaact ctgatgaggt
004261 ttgtagttta ctcttaatgg ttccttttta agaagtaagc ttcaattcca cagtaacatt
004321 catttgtagg ttttctcgca actcctgatc ttctttgttt caccaattca acttgccctg
004381 cacatcttta ttgcttgcag gcttttctct tggttcgatt tctcagatat atgttattta
004441 tttgacctgg tttgagtcaa atttatcttt cattaaagat aaattattag gtgttaaatc
004501 tctgtacaag aggagtcagc atttggatta ataattaaat tactctcgtc tctcccaagt
004561 ttatcatttc agtccatggt ctcatccttc tcttagatcc ctccccttta gttgttcctt
004621 ccctgctctc cttggaactg atatattcgc agctcccatg ttcaagaagc aaaagatgga
004681 agttcttaat tagtgtttct ggtctttgtg tttatgaaac aaacaaaact atgactgaaa
004741 atggtaatca gtatacattc tcaaatgcag cagttcattt gtaatccatt tgtttggaaa
004801 ttcatgttgt atttagtttt gtctggggct tattggagtt aactttcagc atttatattc
004861 attattatct tttcagcagc ccaagctgat gcagccagtg accagcaatg cagtatctgc
004921 tgattcaggg atgtcgatcc caggagccaa aggtgattcc agtctttgta tacctgtgag
004981 gcaagctagg tccagtatct ctctttcatt ttctggtttg actggtgaga gcagtgctgg
005041 agattaccaa gattgtgggg tatcaccagt gctccttatg ggtgagcctc cttggcatcc
005101 tcctggccct gaggggtcat ttgctggagc taccagagac gatgctatca cacgatacaa
005161 ggagaagaag aagagaagaa agtaagtgca tttcttacta atttcgctac tcatttgctt
005221 aaacatttat gctgtataac cacgtaagaa ttctataata aatttgtggc tgcaaaagaa
005281 ctcaaagaga aattgtagct tgtaaacttt tcggcacaac ctctacttta cacatttggt
005341 aaagagtgct tgtatcgttg agtttcatga aagaagacac atggaagtag ttttcatgga
005401 agttaaattt tgagtttttg gaaacatcag tttttgttac cctagtttta cagtaggtag
005461 aagtaaaatt accttaactc tgtatctttt tacttacacc aaaaatgttt ttggtaggta
005521 actgcatcac ataaaaacat gctgaagatt ttctgcttga agataactta ttgctacctt
005581 ttcattcaga gagctaataa cttcttgttt cttgccttct cttctaatat gtcagtccac
005641 tgatgctaac atgctatatt tctagcatac caattgcctc ctttttgaca gctagctgat
005701 tatcttttct catggcttct cttgacagat ttgacaagaa aatcaggtat gcatctcgca
005761 aggctagggc agatgtgaga aaaagagtca agggccggtt tgttaaggct ggtgaagcat
005821 acgactacga tccactctgt gaaacgagga gctactgaac acaataaaac attatccaag
005881 tgttaggtta gcaagcatca accaatgctt gttgtggctg gcaggaaggc actcatacta
005941 caaacaatgt ggcaggcctg cctctaaaaa caacaaaaaa aacagagcaa tcaaggggac
006001 aaaaaggaca aaaagatttg aatttgggaa atttttcaga tgctaccccc tcctttttct
006061 tctgtacagt ggagggaatt tgcatctttc tgttgctttc gggaggagcg atttgagtcg
006121 ctgcccacct tttgtgaatt aatcttgata cagctgaaca aacttcactt gcatttttat
006181 ctcctttcta ctaaccagag catccaccta cccttgctgt ggtgtttttg gtggtatgct
006241 tccagattgg actattagca agacaaggat ggatgtagtc gtgaaatctt ctgctgctct
006301 atttattgtt atgtaaaatc tgctgtaatc cggagtttat tctgcaactc tgcatgtgta
006361 aataccagat cagaataaac tggtagatgt aaagttttct ttattttctc aagtcgatga
006421 cattggaacc catgtaaccg gccaccaact tttttgtttc actatgctca aatattcgaa
006481 aacttcagac tggcttaatg ctattatttg tact
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.