cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK072192
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os06g0298200
(
IRGSP 1.0
)
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RAP - Chromosome No.
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6
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RAP - Location, Length
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11,138,109 -
11,144,668
( - );
6,560(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
11,138,109 -
11,138,964
( - );
856 (bp)
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Exon 2
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Location |
11,139,512 -
11,139,813
( - );
302 (bp)
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Exon 3
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Location |
11,140,435 -
11,140,635
( - );
201 (bp)
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Exon 4
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Location |
11,141,864 -
11,142,546
( - );
683 (bp)
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Exon 5
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Location |
11,144,467 -
11,144,668
( - );
202 (bp)
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Chromosome: 6
, position: 11,138,109
- 11,144,668
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 tatccttctc ttctccgttt gcttcgctgc tgctgctgct gttctacgcg cgcgacacgg
000061 aagagagaaa agtggttttt tattgggttc ctaagccctt tttgtttcca gaggcttctg
000121 gattgatcgg ttgatctctc tcccttcccc tctagggttt cctgggggtg gatctgagga
000181 gcggcggcgc tccttcgtcc cggtgcgtga tctctctctc tctcaatctc cgttgaggcg
000241 ttggtttccc cgcttggatt ctgcgaggtt ggtagtgttt gcgtccgcgg gggtttgcgc
000301 tctggtttgg atttggaccg agttcgagta cttcggagcc ctttcctctg ttgggattcg
000361 ttggctttgg ggtgttctgc atgcatcggt ccttttacgg aggatttggg gggttttgtt
000421 ctgtttctgg ctggcttcga ttttttactg gctgagtgat tgctgcttcg tgtgtactac
000481 ggcgttgttc gtgtggttgg atttgatatg ggttaatttt ggtttggatt tcgtccgggg
000541 tcatgtaagt gagatttcgg gttaagtttg tgacgacagc tctgaagttt cttacaagat
000601 gtttttttta acagtaatcg acttttctac gattggctat ttttttcccc tttgtttcaa
000661 tcagaaaata aatcttttcc cctttaacaa atgggcgaag catgtttttg aattgaattt
000721 gtgggactgt ttttttattc gatgaactaa aaaaagttat ggatcttagg attgtttttc
000781 ttttttttat tcttcgtatg ttgtcactaa ataaaaaaat ttcagctttt ttctattgtg
000841 aaatatattg tcaatatgtt cttgcttttt ttttcgtact atggtctaag aaactggagt
000901 taaaatgaaa gagaactcgg tctttgacta attctacaat tttttaatgg gacatctttt
000961 ctacatctta aattccatcg ttttcataaa attttctttc gtgcagcttt ttttttcttg
001021 cttgccatag ctattaaaat ctttagttcc ttttttttaa tctttatcca gacatagctt
001081 gcctagatgc aaaagttgtg tgttttgcta tgcccgccta aaataacatt tattttgcca
001141 tgtcatcaaa catttttctt tctgccaatc ctgcatgtcc atgaaaacat ttcttaatag
001201 gcttccttac cctacttttt actggagtac tagtactcaa gactgcaatt ttttcttcac
001261 cttttcgttt acctttataa ggcttttttt ctcccctgat gctatgattt tatcctgcaa
001321 attgaccctt cttttggttt tataaaaaag actaggatag ctccgtcttt ctttgcttat
001381 atcgttattt cagcctcttc tgttagatat atttcccccc tatttcgagt gttcaactaa
001441 tgcggcttgt cgttcgttgc ttggagaaat tgtgataaaa tatactattt tcataatgaa
001501 accgataatt gtcgttgact cgtaatgtag ttattttggt tcttgtgata attttctaca
001561 tctctctttt tcccttgcaa acttagtacc tatgggaatg ggaatatatg ctagaagcaa
001621 tgagtgaggt gctggaatta tataatatgt gccaagagca ggagattcca aagactagtt
001681 gctgatactt ttgtagtggg atttcgattt tttatgcttc ggttggcaaa tgggggcgga
001741 gtccacagat taatgagtcc gttgaaacct aaagtagatg gcggtaatat gtcctaatta
001801 ggaaatatat ctacattatc ctttagatta tattattgat agctgatgca agacgacgct
001861 gagtggaaca tacttgttgc tacctgtttt gaacatttct cttggtttga atgaaaactg
001921 aaaaggatgg ctacctaggg tcctaggtca tagcaactga aacagtaaaa aatataaaat
001981 ctatgttctc atgtaggtgg atgcccataa atgtatgaat attcatttat gaatactcta
002041 cggttttcca atagtatgtg ggaatatttt tttatgtgct ggtactaatg ttttctaata
002101 actgtttgtt gatactgtac aggtttatgt aaatctgatc gatccagaaa gtttgtgaaa
002161 aaagagtgtg gcacatacct aaagctggct taaagtttgc ccatagctaa tatcatgggc
002221 gctctttgtg atttctgcgg ggagcagagg tctatggttt attgccgatc agatgcagca
002281 tccttgtgct tatcgtgtga ccgtaatgtg cattcagcta atgctctttc tcggcgccat
002341 acaaggacac ttctgtgtga tagatgtgct tcacagcctg ccatggtccg ctgccttgta
002401 gaaaatgcct cgctttgcca aaattgtgat tggaatgggc atagtgctgg gtcttcagct
002461 gctggtcata agaggcagac cataaactgc tactcagggt gcccatcatc ttcagaactt
002521 tcaaaaatct ggacatttgt ttcggatatt cctaatgtag ctcctgagcc gaattgcgag
002581 caagggataa gcatgatgag catcagcgac agtggtgtca gtaatcaaga caatgctgca
002641 ggggacagca gtttgttaga tattgctagt gcaaccctta tgagtgatct tggcactgct
002701 ggcaagccaa agtctttgat aggctcctca tctgaagctg gcgtgaacct tcttccactt
002761 gctactgatc agatggctgg atccgtggat tcgacatcag ctaaggtgct ataaggcttt
002821 cacacattcc tccatacata gatttactaa ttcgcctcaa ttcacctctg ccgctgcata
002881 tactacccat atcccatgga tgtaagataa tcgactgttt tcctccctac agttggccat
002941 tatcatttgt ttactctacc atatatgcca tgattttctt tttctgtgtg tactctattt
003001 tgaatgcata ttgtaagtga gttcacttaa atttctatac aagaaaaaga aataatctaa
003061 ctgttaatga tgcataagca taagcttgtc aatgattact ttaccatatg tcatggattt
003121 tttctgtgta ctccgttttg aatggatatt gcaagtgagt tcagttaaat gtctatacca
003181 aaaaaaactg ttaattgtgc ataagcataa gcttatcggg gtagtggatg gtgcatggag
003241 gttcaatagg ctagcagaag ttgctgaaac tgtatacatg catgtgcaat gagatatgaa
003301 cattatgatg tgtatggact acaatctgga tccactcagc agatatgaat agatgaaaca
003361 gggtaataac agaatatgga gtatagaaaa tgtctatatt acagaaatag ttataggact
003421 atcgagaggt ttagacaggt ggataactat ggtgcttatg ttcttatgtc aagtcttgtc
003481 ttccaagtgt tctgtgacct catgcagatc tacaaatgca tattctcaca acattaaaat
003541 ttggtacaag taatctttta aaattattcc ttcacaattt ctttggaaaa tgttaagaac
003601 actgctttgt attatttgga tgatgtagca tttcacattt tagtctatct cgtattctaa
003661 tttatcttac tggaccatag attcccatga caggttattt gtgtggagaa ctttaaagat
003721 tctatacaga gagaatttac tttcgtcttt cttcaaatca ctttctctgt acagcatttg
003781 caaattttca ggccgtttta cttcaatctt ccactacacc atgtttcttt tttagagagc
003841 ataagacaca cacacacaca cacacaaaca cattcttcca catacattca caccgtgtgt
003901 gcgtgtaagc accctatgca cacacaaggc ttcacccagg acatgctttc tctcttaatc
003961 cacacgtgtg catgctccat gcttcttcaa aattagtttg tcactaatct gtgtttatgg
004021 tctccttatg caggtgccct atacggcaga ccaagatatg ttcagcaaag acagtatata
004081 tgaagatttc tgtgtggacg atgttgatct tagtttcgaa aattatgagg aactatttgg
004141 cacctcccat attcaaacag agcaactgtt tgatgatgct gggatcgaca gttactttga
004201 atcgaaggaa ataccttctg gaaactctga tgaggtttgt agtttactct taatggttcc
004261 tttttaagaa gtaagcttca attccacagt aacattcatt tgtaggtttt ctcgcaactc
004321 ctgatcttct ttgtttcacc aattcaactt gccctgcaca tctttattgc ttgcaggctt
004381 ttctcttggt tcgatttctc agatatatgt tatttatttg acctggtttg agtcaaattt
004441 atctttcatt aaagataaat tattaggtgt taaatctctg tacaagagga gtcagcattt
004501 ggattaataa ttaaattact ctcgtctctc ccaagtttat catttcagtc catggtctca
004561 tccttctctt agatccctcc cctttagttg ttccttccct gctctccttg gaactgatat
004621 attcgcagct cccatgttca agaagcaaaa gatggaagtt cttaattagt gtttctggtc
004681 tttgtgttta tgaaacaaac aaaactatga ctgaaaatgg taatcagtat acattctcaa
004741 atgcagcagt tcatttgtaa tccatttgtt tggaaattca tgttgtattt agttttgtct
004801 ggggcttatt ggagttaact ttcagcattt atattcatta ttatcttttc agcagcccaa
004861 gctgatgcag ccagtgacca gcaatgcagt atctgctgat tcagggatgt cgatcccagg
004921 agccaaaggt gattccagtc tttgtatacc tgtgaggcaa gctaggtcca gtatctctct
004981 ttcattttct ggtttgactg gtgagagcag tgctggagat taccaagatt gtggggtatc
005041 accagtgctc cttatgggtg agcctccttg gcatcctcct ggccctgagg ggtcatttgc
005101 tggagctacc agagacgatg ctatcacacg atacaaggag aagaagaaga gaagaaagta
005161 agtgcatttc ttactaattt cgctactcat ttgcttaaac atttatgctg tataaccacg
005221 taagaattct ataataaatt tgtggctgca aaagaactca aagagaaatt gtagcttgta
005281 aacttttcgg cacaacctct actttacaca tttggtaaag agtgcttgta tcgttgagtt
005341 tcatgaaaga agacacatgg aagtagtttt catggaagtt aaattttgag tttttggaaa
005401 catcagtttt tgttacccta gttttacagt aggtagaagt aaaattacct taactctgta
005461 tctttttact tacaccaaaa atgtttttgg taggtaactg catcacataa aaacatgctg
005521 aagattttct gcttgaagat aacttattgc taccttttca ttcagagagc taataacttc
005581 ttgtttcttg ccttctcttc taatatgtca gtccactgat gctaacatgc tatatttcta
005641 gcataccaat tgcctccttt ttgacagcta gctgattatc ttttctcatg gcttctcttg
005701 acagatttga caagaaaatc aggtatgcat ctcgcaaggc tagggcagat gtgagaaaaa
005761 gagtcaaggg ccggtttgtt aaggctggtg aagcatacga ctacgatcca ctctgtgaaa
005821 cgaggagcta ctgaacacaa taaaacatta tccaagtgtt aggttagcaa gcatcaacca
005881 atgcttgttg tggctggcag gaaggcactc atactacaaa caatgtggca ggcctgcctc
005941 taaaaacaac aaaaaaaaca gagcaatcaa ggggacaaaa aggacaaaaa gatttgaatt
006001 tgggaaattt ttcagatgct accccctcct ttttcttctg tacagtggag ggaatttgca
006061 tctttctgtt gctttcggga ggagcgattt gagtcgctgc ccaccttttg tgaattaatc
006121 ttgatacagc tgaacaaact tcacttgcat ttttatctcc tttctactaa ccagagcatc
006181 cacctaccct tgctgtggtg tttttggtgg tatgcttcca gattggacta ttagcaagac
006241 aaggatggat gtagtcgtga aatcttctgc tgctctattt attgttatgt aaaatctgct
006301 gtaatccgga gtttattctg caactctgca tgtgtaaata ccagatcaga ataaactggt
006361 agatgtaaag ttttctttat tttctcaagt cgatgacatt ggaacccatg taaccggcca
006421 ccaacttttt tgtttcacta tgctcaaata ttcgaaaact tcagactggc ttaatgctat
006481 tatttgtact aagcatatgc ttgaatatgc ggtccttttt gttacaagta atattctttt
006541 tgtggttgat ttgacctttt
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.