Update info.cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK068920 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os06g0726400 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 6 |
| RAP - Location, Length | 31,775,183 - 31,782,368 ( - ); 7,186(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 31,775,183 - 31,775,634 ( - ); 452 (bp) |
| Exon 2 | Location | 31,775,717 - 31,775,833 ( - ); 117 (bp) |
| Exon 3 | Location | 31,775,951 - 31,776,032 ( - ); 82 (bp) |
| Exon 4 | Location | 31,776,114 - 31,776,181 ( - ); 68 (bp) |
| Exon 5 | Location | 31,776,347 - 31,776,448 ( - ); 102 (bp) |
| Exon 6 | Location | 31,776,918 - 31,777,025 ( - ); 108 (bp) |
| Exon 7 | Location | 31,777,464 - 31,777,526 ( - ); 63 (bp) |
| Exon 8 | Location | 31,777,684 - 31,777,800 ( - ); 117 (bp) |
| Exon 9 | Location | 31,778,113 - 31,779,019 ( - ); 907 (bp) |
| Exon 10 | Location | 31,779,128 - 31,779,397 ( - ); 270 (bp) |
| Exon 11 | Location | 31,779,832 - 31,779,901 ( - ); 70 (bp) |
| Exon 12 | Location | 31,780,017 - 31,780,224 ( - ); 208 (bp) |
| Exon 13 | Location | 31,781,109 - 31,782,368 ( - ); 1,260 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXPro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os06g0726400 | Os06t0726400-04 | 204594 | J013170H02 | 415 | LOC_Os06g51084.1 | AK068920 | 38058 | Q01401 | GLGB_ORYSJ |
| Os06g0726400 | Os06t0726400-04 | 204594 | J013170H02 | 415 | LOC_Os06g51084.2 | AK068920 | 38058 | Q01401 | GLGB_ORYSJ |
| Os06g0726400 | Os06t0726400-04 | 204594 | J013170H02 | 415 | LOC_Os06g51084.3 | AK068920 | 38058 | Q01401 | GLGB_ORYSJ |
| Os06g0726400 | Os06t0726400-04 | 204594 | J013170H02 | 415 | LOC_Os06g51084.4 | AK068920 | 38058 | Q01401 | GLGB_ORYSJ |
| Os06g0726400 | Os06t0726400-04 | 204594 | J013170H02 | 415 | LOC_Os06g51084.5 | AK068920 | 38058 | Q01401 | GLGB_ORYSJ |
| Os06g0726400 | Os06t0726400-04 | 204594 | J013170H02 | 415 | LOC_Os06g51084.6 | AK068920 | 38058 | Q01401 | GLGB_ORYSJ |
| Os06g0726400 | Os06t0726400-04 | 204594 | J013170H02 | 415 | LOC_Os06g51084.7 | AK068920 | 38058 | Q01401 | GLGB_ORYSJ |
| Os06g0726400 | Os06t0726400-04 | 204594 | J013170H02 | 415 | LOC_Os06g51084.8 | AK068920 | 38058 | Q01401 | GLGB_ORYSJ |
Chromosome: 6 , position: 31,775,183 - 31,782,368 bp |
|
|
Now loading |
|
|
|
| Sequence (Data source : RAP-DB) | |
|---|---|
|
Nucleotide
Fasta Format |
000001 aagtaagtct gaatttcttt ggccacaggc gacagcccca aaaccccgac accccaccgc 000061 cgaccacctc gccgccggcg gcaccgctcc cctttgccgc cgtcggctct acctccttcc 000121 cactctcccg tccttctcct agcctccctc ctctctctct ctctctcaat acttttttct 000181 acctttcata ctaccttcca tgttcttgtt ccgaatctgg gttcccaagc cgctgatgcg 000241 ccccttccct gattcttctg atggaactag gggaggctgt gtggccattt ttcccgttgg 000301 agggtttcgt ctagatctgt cgggtgtggg acatgcggat tgcaggtgct gtcggttgtg 000361 ttggcggcgg cgggtcctgc cgggatagtt ggccgccgac ggccgcttgg ctgttgggtt 000421 gcacggtgtg tgctggctgg tagcgaggat ggttttaggg tgttgggcga aagctctgtc 000481 cgactcatag ccggcctgac ggcgatgaac gtccttggac atcatgcaat gcccctcctg 000541 gaggcgtcgt cgcaagagca tctccagtag agaccctaaa tacaattcct aaacagtttt 000601 taggtgctaa ggacaaaaaa taaactccag caaaacccat actacaggtc ctaaaatagg 000661 aaggacctca aatacccctc cgcagtccct aggcctgggg gctgtagacc gaggccctat 000721 cgccgttttt ctacgcggga ggaaatttcc tgacgtgtgg tgtctgtctt ccctcccgcg 000781 gaatcgctgc cacggcgccg atcttcgcca gctcgctggt tccgccgctc gtggccgacg 000841 gtgcgaccat ccagtacctc caccggccac tgcttgtcgt ccgcgtgccc gcttgcttgt 000901 tttttcgtgg tccttgatca gttcgcacac tgatgcacta tatggtagac aagaatgttc 000961 tgaaattcat gaccatcaga aacatgttct aaacaatcct gctctcgatt ggtttatggc 001021 taactgtggt tctaaacgat catggcataa aaattattgt tctgttcctt taaagtttgt 001081 ggtgcttggt aggttgagac aattaggctg cttgcaatta tgcagtagtt ccttcaaaga 001141 ttattctgca gtgttgttct tttgtgtcag ttgtgagttg aagtttaact tcaaggtttt 001201 ttttttctag gaggatttaa gctctttctg aagtttctca gatagattag attggaaaag 001261 gtatagagtt aattttatct attgattata gttcttattt aattgaacta cgtagtgtct 001321 tgaatacttg ccggtaggat ttcactccca tgtttgagaa ttttgaattt gaattatggt 001381 atttaaaatt atggatttga atacaattga attctataca ttagaaatat tcgtatttga 001441 attattacta tgttaaacta ggtgtaagca tagagtataa tcagaaatac aagagaaaaa 001501 gaaatggggg ctaagaaata gggtctgctg gtagagttgg aggtaatttt tgaattctta 001561 gaaaataggg acagccctca ttcaaccttt gaggactcta aaatagggac tactgctgga 001621 gatgctctaa caccctgttc ccccttgctg ctgggtgaaa accctttcca gtctcctgtt 001681 tatgcgatgg tggcgtcctt tccgacgtcg tcaccttctt caaggcatcg tttttggaga 001741 aaccctgcaa ccagtccccc tgctttccca tccttctccc ctattccatc ccctcctcct 001801 ccccttttct tctgtcaagg gctcctatgc ttggaaactc tcatgtatct cttctctgta 001861 atatattcag gtggggaaat gttggatttt tattgattgg aatactgtat tgggtcatct 001921 cggtgacacc aaagctgtac tttggtggag tagcaatctt tgcccttatt gaccggatag 001981 gattttggtt aaatttatct acgtttttgt ttgcggttca tcttttttcc taccagtctt 002041 atacaagatg gtacagttta gcaactgatt gttacattgc aatatataaa tcgaagtgat 002101 agaagccacc tcaagtaaat ctaactattg ttcataattc aaaggtcaag accaatttct 002161 cagttcctgc gactgcgcga aaaaacaaaa ccatggtgac tgttgtggag gaggtcgacc 002221 accttcctat atatgatctg gaccctaagt tggaggaatt caaggatcac ttcaactata 002281 ggataaaaag atacctcgac cagaaatgcc tgattgaaaa acatgagggg ggccttgaag 002341 aattttctaa aggttaagtt cactacttca atttaatgca caaatactcc ttcatacaag 002401 agtcggcata tgctattttc tttgcatctt ttaactcttt atggttctct cattccatct 002461 tttgtaggct atttgaagtt tgggattaat acagttgatg gtgccacaat atatcgtgaa 002521 tgggcgcctg ctgcacagta agttctaatg tagtcatcca gctattcgct aatgtttatg 002581 tgttgtagga aatatggatc actgatcaag ttgtttaagt accacttctt cattttattt 002641 tcaatactat gctttgtctg gtagcagcta gcagaaagtt aattttacaa cataagatag 002701 ctcctcaccg ccggtaatag agatgttttg agttttcact catagcacgt cttggctgtt 002761 taaggtaagt atcgggggta gaacataatg ccatgaagag agaaaattat gttatctgtg 002821 tccgattgta gttggttctg aacttgtgag gctgtgattt cttaattgtc gtttttgtta 002881 agaccttacc agtatttgca atatttaatg catttttttg cggggaaata ttcaatgcat 002941 ttaacttgga ggtttttctt catgcatata gagaagcaca gctcattggt gagttcaata 003001 actggaatgg tgcaaaacac aagatggaga aggataaatt tggcatttgg tcaatcaaga 003061 tttcacatgt caatgggaag cctgccatcc ctcacaattc caaggttaaa tttcgcttta 003121 ggcatggggg tggagcatgg gttgatcgta ttcccgcatg gattcgttat gcaacttttg 003181 atgcctctaa atttggagct ccatatgatg gtgtacactg ggatcctcca gcctgtgaaa 003241 ggtcctctac ttgtgccttg aactacaatg taaacaagct tcaaatattt gggaagcata 003301 aagacgcaaa gctttgctga catgatcact gttactgttt accttacagg tacgtgttta 003361 agcatcctcg acctccaaaa cctgatgctc cacgcatcta tgaggctcat gtggggatga 003421 gtggtgaaga gccagaagta agcacataca gagaatttgc agacaatgtg ttaccacgca 003481 tacgggcaaa taactacaac acagttcagt taatggcaat catggaacat tcctactatg 003541 cttcttttgg gtatcacgtg acaaattttt tcgcagtcag cagcagatca ggaacaccag 003601 aggatctgaa atatcttgtt gacaaggcac atagtttagg attacgagtt ctgatggatg 003661 ttgtccatag ccatgcgagt aataatgtga ccgatggtct aaatggctat gacgttggac 003721 aaaacactca tgagtcttat tttcatacag gagatagggg ctaccataaa ctctgggata 003781 gtcgtctgtt caactatgcc aattgggagg tcttaagatt tcttctttct aatttgagat 003841 attggatgga cgaattcatg tttgatggct tccgatttga tggggttaca tcaatgctat 003901 accatcacca tggtatcaat aagggattta ctggaaacta caaggagtat ttcagtttgg 003961 ataccgatgt ggatgcaatt gtttacatga tgctcgcaaa ccatttaatg cataaactct 004021 tgccggaagc aactattgtt gctgaagatg tttcgggcat gccagtgctt tgtcggccag 004081 ttgatgaagg tggagtaggg tttgacttcc gcctggcaat ggccattcct gatagatgga 004141 ttgactacct gaagaacaaa gaggaccgca aatggtcaat gagtgaaata gtgcaaactt 004201 tgactaacag gagatataca gaaaaatgca ttgcctatgc cgagagccat gatcaggtat 004261 agttatccat tatctaacag atgatcaggt atagttgggt ggtaatacac ttgtttgact 004321 tggtagacaa atcaacactt agctgatggc tctgaatact ttgatatcgc ataatcctgt 004381 aggttatcaa attgctactc tattttttga tagctattga cagtaagcag gttccttttt 004441 tcactatgaa tagtaacaat gtataagggc cttacaacca ttatccaata attagctgca 004501 gcatgctgtt agcttcatgt tcttatgtcg agacagttac tgaattgctg attttacaca 004561 tttttcagtc cattgttggt gacaagacta tagcatttct cttgatggac aaggaaatgt 004621 acactggcat gtcagacttg cagcctgctt cacctaccat caaccgtggc attgcactcc 004681 aaaaggttat tttcccctta attgttgttg atttcatggt gctagttcta gacaattgtt 004741 gtaatgtcca tagatttact aaaatttctg gtcgttattt gaatacaatg tgtcctggcc 004801 tcttttaata ttatttggct aattgtgctt caaatatttc agatgattca cttcattacg 004861 atggcccttg gaggtgatgg ctacttaaat tttatgggca atgaggtaat atcttagtaa 004921 tatgttgaaa ctcgcttcct gttaatgcgt tccttgaatg ttgattcctt tgcattctct 004981 ttcctttgtg tgggtaaagt gaggcacata aagggttagc ccgctgttct taagatgccc 005041 aagtacttgg cagctaattt ttaacataca taaactgaag cattgttatc tttgtgcatg 005101 atgtgttctg ttattcctgg tcatccacta atccaaatca tacataaact gaaatcacac 005161 acatgattta tattgatatt ttctcttgag tagcacaaac atgatatagt ggtattatca 005221 agtcttatgc tacatataaa atgagttcct tgcacaacat gggctatatg tacggcatag 005281 ctgctgtgtc tggggttctt gtatgtcttt ccaactcata ttgattctgc aatttccttt 005341 tagtttggcc atccagaatg gattgacttt ccaagagaag gcaacaactg gagctatgat 005401 aaatgcagac gtcagtggag ccttgtcgac actgatcacc ttcgatacaa ggttgtgcct 005461 aagtatatca atgtatttta catgttttgt catggcagca ccttttggtt gtttgccatc 005521 atcacctccc ttttggttca atgttcttgc tatttacagt gggctcctat tcactttgga 005581 atcgagttca aatttcctgt gcagcacatt atttcaatcc tttcctatta gcataaaatg 005641 tttccttagg ctacctacag tttctttgat gttcacacag aattgatgtg ggcatgcatt 005701 ttccatgcat aaatcggaac ggcatgttct gaaaaattat tctaaagata aaggacgaat 005761 gccaaggacc ctgtccattt gttcaaatgt agttctttct ctgcataaaa caatttatcc 005821 ttatgaatta ttcgtatttt ccccagcatt ctctgcagtc aagctctgca atttgtctca 005881 cctaacatgt ctaattttta attgcaccaa tattgaacag tatatgaatg catttgatca 005941 agcaatgaat gcactcgagg aggaattttc cttcctgtca tcatcaaagc agattgttag 006001 cgacatgaac gagaaagata aggtaatggc aattgtaatt tagtatgggc ccttgttgct 006061 tgtatgtcct atgtattcaa atgaggtgag ttgttcagga aagcacggca cgaaattcta 006121 gctatgtggt gagaacaatt aatttcttaa aatacaactg tacaattaac tccaagttcc 006181 ttttcaggtt attgtctttg aacgtggaga tttggttttt gttttcaatt ttcatcccaa 006241 caaaacttac aaggggtaac taattcattt taagctttgc cttttgaaaa tactctgttc 006301 agtacttaat ataatctcca cttgcaaaat gtgcagttac aaagtcggat gtgacttgcc 006361 cgggaagtac agagtagctc tggactctga tgctttggtc tttggtggcc atggaagagt 006421 aagcagcgac ggcaaatgct caaaatattt ttgcactctt tctcctaaac tattgaggca 006481 ccaccaaatt tgcatcagat aacttatttg cagtattgat cttgttgtac cacaggttgg 006541 ccatgatgtg gatcacttca cgtctcccga gggaatgcca ggagtaccag aaacaaattt 006601 caacaaccgc cctaactcat tcaaagtcct ttccccgccc cgtacctgtg tggtaaagtc 006661 cattcactga aattttcata actaatgagc cataaccaac tgcaatgcaa cctcacaaaa 006721 tgcttcacta tcaggcttac tatcgcgttg atgaagatcg tgaagagctc aggaggggtg 006781 gagcagttgc ttctggaaag attgttacag agtatatcga tgttgaagca acaagtgggg 006841 agactatctc tggtggctgg aagggctccg agaaggacga ttgtggcaag aaagggatga 006901 agtttgtgtt tcggtcttct gacgaagact gcaaatgaag catcagattt cttgatcagg 006961 agcaactgtt ggtgcccttg taatctggag atcctggctt gccttggact tggttgtggt 007021 tctttagcag ttgctatgta cctatctatg atatgaactt tatgtatagt tcgccttaaa 007081 gaaagaataa gcagtgatga tgtggcctta aacctgagct gcacaagcct aatgtaaaaa 007141 taaagtttca ggctttcatc cagaataaaa cagctgttca tttacc |
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| CJ832262 | whatlal37c14 | 719 |
| more... (Total Hit Count: 22 ) | ||
