cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK068236     Link to RAP-DB ( IRGSP 1.0 / Build5 )
RAP ID Os06g0256500 ( IRGSP 1.0 / Build5 )
RAP - Chromosome No. 6
RAP - Location, Length 8,151,445 -  8,158,314  ( + ) ;   6,870(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 8,151,445 -  8,151,587 ( + ) ;   143 (bp)
Exon 2 Location 8,151,829 -  8,151,888 ( + ) ;   60 (bp)
Exon 3 Location 8,152,043 -  8,152,119 ( + ) ;   77 (bp)
Exon 4 Location 8,152,195 -  8,152,276 ( + ) ;   82 (bp)
Exon 5 Location 8,152,350 -  8,152,397 ( + ) ;   48 (bp)
Exon 6 Location 8,152,700 -  8,152,855 ( + ) ;   156 (bp)
Exon 7 Location 8,152,931 -  8,153,027 ( + ) ;   97 (bp)
Exon 8 Location 8,153,126 -  8,153,168 ( + ) ;   43 (bp)
Exon 9 Location 8,153,559 -  8,153,626 ( + ) ;   68 (bp)
Exon 10 Location 8,153,717 -  8,153,801 ( + ) ;   85 (bp)
Exon 11 Location 8,153,882 -  8,153,930 ( + ) ;   49 (bp)
Exon 12 Location 8,154,152 -  8,154,224 ( + ) ;   73 (bp)
Exon 13 Location 8,154,303 -  8,154,363 ( + ) ;   61 (bp)
Exon 14 Location 8,155,298 -  8,155,364 ( + ) ;   67 (bp)
Exon 15 Location 8,155,434 -  8,155,490 ( + ) ;   57 (bp)
Exon 16 Location 8,155,584 -  8,155,637 ( + ) ;   54 (bp)
Exon 17 Location 8,155,721 -  8,155,849 ( + ) ;   129 (bp)
Exon 18 Location 8,156,376 -  8,156,439 ( + ) ;   64 (bp)
Exon 19 Location 8,156,550 -  8,156,623 ( + ) ;   74 (bp)
Exon 20 Location 8,156,707 -  8,156,760 ( + ) ;   54 (bp)
Exon 21 Location 8,156,880 -  8,156,948 ( + ) ;   69 (bp)
Exon 22 Location 8,157,578 -  8,157,667 ( + ) ;   90 (bp)
Exon 23 Location 8,157,840 -  8,157,947 ( + ) ;   108 (bp)
Exon 24 Location 8,158,060 -  8,158,314 ( + ) ;   255 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
Tigr ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
UniProt
Accession No
UniProt Entry
Name
Os06g0256500 Os06t0256500-01 203843 J013149G03 3511 LOC_Os06g14510.1 AK068236 43577 AP008212.2 255676632 BAF19230.1 113595356 NC_008399.2 297606578 NM_001063851.1 115467433 NP_001057316.1 115467434 P42863 G6PIB_ORYSJ
Os06g0256500 Os06t0256500-01 203843 J013149G03 3511 LOC_Os06g14510.2 AK068236 43577 AP008212.2 255676632 BAF19230.1 113595356 NC_008399.2 297606578 NM_001063851.1 115467433 NP_001057316.1 115467434 P42863 G6PIB_ORYSJ
Os06g0256500 Os06t0256500-01 203843 J013149G03 3511 LOC_Os06g14510.3 AK068236 43577 AP008212.2 255676632 BAF19230.1 113595356 NC_008399.2 297606578 NM_001063851.1 115467433 NP_001057316.1 115467434 P42863 G6PIB_ORYSJ


Chromosome: 6 ,  position: 8,151,445 - 8,158,314 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 acagagacga aagacacggg gaaataaaca aacaaaccaa aaaaaataaa atcgagaaaa 
000061 aagtggagat ataaattcaa tcgcaggaag cgaagcgcgg atccgcttcc tcatccaccg 
000121 atcgccccct ccttcatcct ccggtataat tccgcccctg aattcctctt cccgaattgc 
000181 tttttttttt ccctaacgct actgtttgcg atttcattcg attcgctggc tgctcgttgg 
000241 ccgcaaggct cgatcgatct ggtaccagat tggctgtctg ttcggttcgc tttggttccg 
000301 atttcgggtg aagccggatg cgtttttcgc tgatgatttg gctggtttcg tgattgtgtt 
000361 ttggtttttt ttttttggtt gcaggtagca gtcatggcgt cgtcggcgct aatctgcgac 
000421 accgagcagt ggaagggcct ccaggtgcgt gagttgatac gtgctcgaag cactgccaat 
000481 tttttttttg agtgctcgca ttgctgcggt ttctattcga tgtattgctt gcttcgatta 
000541 tagattttgg taggctcact atgatttcgt gtttcgccac gcatgcgggg gcgagcaggc 
000601 gcacgtcggg gcgattcaga agacgcacct gcgcgatctg atggatgatg ccgagcgctg 
000661 caaggcaatg acagcgtaag gattgaaatt tctcctgttg catgtgtggg tttctgcttt 
000721 ggttttttga ggtgcttgtt tggttgacag tgagtatgaa ggcatatttc tggattactc 
000781 gaggcagcgt gcaactggcg agaccatgga gaagctgttt aaattggcag aggtgacacc 
000841 tgtttgctat gtaggagtac gatggttttg gtgtcatgat ttgggatcta accaatttat 
000901 tgtaggcggc aaagctcaag gagaagattg agaagatgtt tagtggtgac aaggtaagca 
000961 tcattatctg caaaagatgt tcagttttct gaagggggtg tttattcagt aacttcatca 
001021 tatgtaaaga gttccttgcc atgaagactc tgtacacata tttagcttgc atgtaatatt 
001081 taaacttgca tgtgattctg catattaaat agcttgacta ttttgttctg agctccgttt 
001141 cttaatttag tattaatgtt tggactattc ttaagcttcc cattccatat atatatacat 
001201 ttcttttttg tgttgctgtg atgcatttgt aacattactt ggtttgtttt cttagataaa 
001261 tagcacagag aacagatctg tgcttcatgt agctctaagg gctccaagag acgaagtaat 
001321 aaaaagtgat ggggtcaatg tggttcccga agtttggggt gtaaaagata aaatcaagca 
001381 gttttcagaa acttttagga gtggatcatg ggtaagttaa gatttttctt gaaccctgta 
001441 aatctttttg aacactgaag attgatcact gctacttctt tcacaggttg gggcaactgg 
001501 taaagcattg acaaatgttg tgtcagttgg aataggtggt agctttcttg gtcctctgtt 
001561 cgtgcatgct gccctccaga caggtgaact actataatgt tcattcttag gttctctgca 
001621 ctgagattgt ttttctgaaa attataatct gccaaaccct gaaaatcttg ctaattttca 
001681 gatccagaag ctgcagaatc tgccaaaggg cgacagttaa gattgtaagt gtgtatttgg 
001741 gacatgtttt caattgtaat gtgcaggcca acagcaatta tatgctttgc aaacagtatg 
001801 tttctgcagt acaatttcta tgttaaattc tactatgtga atttgtttat ttagcttgct 
001861 agtttgttcc agtatttttt tttctactgg ggcatagtat tcctttgctt ttatgtcttc 
001921 gaagtaattt gttccagcag tttttacgtt gtgaagtcag tcgtgattca tgtgagatct 
001981 tgtcctatgc ttagtacttc aatttatatc tggatgatgt tttactgttt ttgttattca 
002041 gtttccatat ttttctatcg ttcatgcatg atgttttcat ctattaatta tatgtaattt 
002101 tggttatctt gtagccttgc aaatgttgac cctgttgatg ttgcacgaag catcaaagat 
002161 ttagatcctg aaacaacact tggtaattac catgctttgt tctttcatac ccactcactt 
002221 agatgttgtg aatatctgca gaggttttaa ttgttatgtg aaaaacttgc agttgtggtt 
002281 gtctcaaaga ccttcacaac agctgaaaca atgttaaatg ctcgaactct caaggagtgg 
002341 attgtctctt ctcttgggtt agtatattag cacctgaaac acctttgccc ctagtcccat 
002401 tattatggtg agactgatcc taaatgtgtt gattcagacc tgatgctgtt gcgaaacata 
002461 tgattgctgt cagtaccaat cttgaggtac ttctggagct tttactttga cattcaaatt 
002521 tcacttgatc taatctcttt tccgcactct tgtatcttat atacatttgg attataaatg 
002581 tgttaaaatt gcattgttaa cgtgtttgac tattctgctt ccatactcca agtgttgtgt 
002641 aatacgccaa tgaattgttt attctaatgt gatgaaattt cacctatcca tttttctggt 
002701 tttgaagctt gtggagaagt ttggaattga ccctaaaaat gcttttgcat tttgggactg 
002761 ggttggtggt cgctatagtg gtgagatttt tttttcaatt taaaaatatc agctacctta 
002821 tcattatgtc tgtttgtaac tgtagtccaa tgttgcagtt tgcagtgctg ttggtgtcct 
002881 gcccttatct cttcaatatg gttttccgat tgttcagaag tatgcatctg aacctatatt 
002941 gcattctcaa atgtctactt ttttttatta caaataagta aatacaagat ctgtaggagt 
003001 ttgaactttg taacacagga tcaatttcat tactataaaa tgagtccgtg ttcctttagt 
003061 cttcttgtgt tcagaataca catattatgc cagattttga aaaaccatgg cactatggta 
003121 gtaaacaatg atactagaaa aaaaaaagct tatagcacga taatgacagt gcagactaat 
003181 cttatcggca ggtgagtgct aataactaca gctactttta aggtctaaaa aaaagacttt 
003241 gttacatcag gctaccttca tacatgagca tatacgtcat atatgtatca gtgatcaccc 
003301 accaccatta ccataagatg tgccaaaatt tctgactcag aaatataaga ccttggggcc 
003361 agcccctttt tgtccattac tccattagaa tgtactagca aaatgaccat actttgctgt 
003421 ggataaaaaa atatattata atatgtaatt gcttattaaa aagttatcat atatgttagt 
003481 atcacttgtt tacttgtttg aatatatggt atttacttgt ttgatccgaa tatttggact 
003541 attccataat atcaaaaaaa taacaggagc ctatttgtaa aaactataaa gacagtggtg 
003601 gggtggcaga ttcactacca ccaccactag ggacttttaa aggagtatac atcttctgtt 
003661 ccttcgtagt actgtggaaa tttaggatgt gaactttttt gtttctatgg aaagttaaat 
003721 ccaatgattg ataattaaat tttgttggag ctctttagta agttgttcac ttggtcaggt 
003781 tggggggctt gaagctaaaa tttgatgata gatttataca tgatacactc ttagtaattg 
003841 ttttcttttg aagatttttg gagggtgcag ccagcatcga caaacacttc cgttcatctt 
003901 catttgagaa aaacatacct gtaagtgact tttctatttt ctattttgtt gctaaccacc 
003961 tatctaacag gtctatcatt tctgggtagg tactccttgg tttgctgagt gtgtggaatg 
004021 tttcctttct tggatatcca gctagagtaa gaaactctgt tccattggat catattttca 
004081 attatgaatt gacctaggcc ttcatttgag tattatttct aatataaatg ttcttttagg 
004141 caatattgcc ctattcccag gcacttgaga aatttgcacc acatattcag caggtacttt 
004201 actactcatc ttagctggtt tcatcatggc actccagtta tttctagtca taacatgcgc 
004261 tcattatgtt gtaaagctta gcatggagag taatggaaag ggtgtctcta ttgatggcgt 
004321 tcaattgtcc tttgagactg gtgaaattga ttttggtgaa cctggaacca atgggcaaca 
004381 cagcttctat caattaatcc atcaggtaat gatcagtact tctagattgt taatccacct 
004441 ggaacttatt tgactaccat agtatgcaaa gcttgacaat ggataccagc ttagagaact 
004501 tatttgacca gcatagtatg caaagcttga caatgcatac cacttagagt agatgacatt 
004561 ttgatggcat gcaacatttc tttttctctt gctgattgtg gatatgcttc atttattagg 
004621 ctatcgtccc tttgcatcaa tatgtttata ttattatgga tggattctgc aaattgcaac 
004681 catgtcacct tgtacatttg tcttagtctt gtccttgatt tcttctgtag ttcttttgcg 
004741 atatgagcat catgtttttc aatcagtgtt gtcattcttt caaacaaaat attttaactt 
004801 atacgagtaa caatgattcc tacttcttgc ctttccaagt atctaaataa tacaaaagga 
004861 attgaaggat tatcaagaaa cttattgtga atatgcatct ttgttgataa tgtttgtacc 
004921 taaatttcca gggaagagtt attccttgtg attttatcgg cgtcgtgaaa agccagcaac 
004981 ccgtttactt gaaaggtacc agtagtacag gaattttgtt ctctttgtta aaccttgata 
005041 tgttgcatgt tgtccttatt atcttcagct gcccgttgaa cacttgtatt gtacatctct 
005101 ttcaggggaa attgtgagca atcatgacga attgatgtcc aatttctttg ctcagcctga 
005161 tgcacttgct tatggaaagg taaacagcta aatatatttt ggatgtgcaa ataatccatg 
005221 aactgttttt gtttctgaca gtagtttact gtatgtttcc agacccctga acaactgcac 
005281 agcgagaaag tacctgaaca tcttatctct cataaggtaa taataattta gtcattcctt 
005341 gtctagttct cccaataaat taatgcttgc tgttataggt gtaacttctg acacagcatt 
005401 ctcgtgcctc tcttggtccg tttttgttgt tacagacttt tcagggcaac cgaccatcac 
005461 ttagtttatt gctgccctca ttatctgctt atgagattgg acaggtatgc aaattgcatt 
005521 cagacacttg tttggcattg caagtctagt cctaaaccat agcaattttt atcaccaata 
005581 ggattctgat cttgttgtat gatgcgttct catcgtcatg aagacctgac cagcatactc 
005641 cattttttgt ttcgagaaaa aacatgacaa tatgctggtt ccttgctatg attaatgtca 
005701 aatcaattat ccttttcttc ttttaaaaaa acgacccggg gggggggggg gggggatttg 
005761 agatgaactg atgtgcagag cagtaggaga gttactctgc ttctgagacc tatggtggta 
005821 tttaagattg tgtgcagcgg atactaagtg ccctccccac tgcagctcgt gtgcagacaa 
005881 attaaattgt gctgcttcgt agctttgttt cctgtttgta atcatgtcac gcagcagtta 
005941 ttggaatgta gttgtgttat ttgccataat gcaaacctat gagatgtata atttacatga 
006001 tcctttctcc attctgttgt actttggaag tctttggttg actcccaatt acttggaaga 
006061 gctttttgtt tattccaaat tgagttgctg ttttctgcag atgtactaag tactaacaaa 
006121 ctctactttt cagcttttat ccatctacga gcaccggatt gcagttcagg gtttcctatg 
006181 gggaataaac tcatttgacc agtggggagt ggaactggga aaggttagtg cttgaacata 
006241 ttttagacat atttccattt tcgtttgaag gtctagttgt tttggctcca tctagcacgt 
006301 gatctcccat aacttcttcc ccctgcccat atgtttatgt gttttcttca tctgaagact 
006361 gaactgtgtt atgtctgtaa tttttttgtc tcaagtctct ggcttctcaa gtgagaaaat 
006421 ctctgcatgc atcccgcatg gaaggaaagc ctgtccaggg gttcaacagc agcactgcaa 
006481 gtttgctgac acgatatctc gctgtatgtt cttttgatag ttcatcataa tttattgttc 
006541 cttttttttt caaaattaaa tttagtttcc taagtgttct tgacaactca agtgagcatt 
006601 taatctgttc tgtaggttga gccatccact ccttacaaca ctacaacaat gccgaaagtt 
006661 taatatgatg tgtttggcac gctattttct ttgagttaaa caaggttgag ccggcatatt 
006721 ctgtaataag tttatttatg ttccttttga agttgttaca ggcttacagc ccgttttaca 
006781 gtaccatagt tttgttgttt ttttcttttt atttactccg acttccagga gaacaaaatg 
006841 gaaaagaaaa aggaaaggaa actattttgc 

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
AK249595 FLbaf44b12 2233
more... (Total Hit Count: 13 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ899408 whthkles19k06 711
more... (Total Hit Count: 87 )
/rice/oryzabase