cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK241747
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os05g0557700
(
IRGSP 1.0
)
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RAP - Chromosome No.
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5
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RAP - Location, Length
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27,856,224 -
27,863,789
( - );
7,566(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
27,856,224 -
27,856,709
( - );
486 (bp)
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Exon 2
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Location |
27,857,115 -
27,857,426
( - );
312 (bp)
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Exon 3
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Location |
27,857,524 -
27,857,663
( - );
140 (bp)
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Exon 4
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Location |
27,858,223 -
27,858,286
( - );
64 (bp)
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Exon 5
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Location |
27,858,401 -
27,858,607
( - );
207 (bp)
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Exon 6
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Location |
27,858,680 -
27,858,823
( - );
144 (bp)
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Exon 7
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Location |
27,858,908 -
27,859,039
( - );
132 (bp)
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Exon 8
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Location |
27,859,210 -
27,860,624
( - );
1,415 (bp)
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Exon 9
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Location |
27,860,744 -
27,860,874
( - );
131 (bp)
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Exon 10
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Location |
27,860,977 -
27,861,626
( - );
650 (bp)
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Exon 11
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Location |
27,863,358 -
27,863,789
( - );
432 (bp)
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Chromosome: 5
, position: 27,856,224
- 27,863,789
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gcaccataga aatcaccagg acccatcgca agagcagcag cctagcggag caccgagcaa
000061 gaacaagcag cagcagcagc agcagcagaa gcagaagcag tagaagaaga agcttttctt
000121 gctttgcttg ctttctctct ctctaggctc catctcctcc ctccaccact gcgtctcgaa
000181 atatccggct ttcttgttgt gcgatttggt gcgaggtggt ggtgattgct tcgtcggctg
000241 ttgatttctt cgaggaattg gagctgtgtt gggggattca ggggggcttc atggtcgaag
000301 ggctcgggga tggattgagg cgtgggagaa gaggagctta gcttcctctt cttcttcggt
000361 gatcgggttt ggggttcttg gaatcgcgag gaggcgggac atggcgggag attgggcttg
000421 tcacagactc aggtatggat tgcattctcc tctcgaattt ggtttctttc cggctgccct
000481 ccgcgcagcc cctgccccgg cgaggctggc cggcggcgac tgccaccccg ccgccggtga
000541 tgtgcgtgca agaattgcgc ttcaatggcg aatttccttg tgttgtctcg attttgacca
000601 tcacgtttac atggttaaaa atggtagtag tctttagaaa aaatggaaga ttcaggtgtt
000661 catcgttagc tcttgatagc aatgcgtctg attttttttt ctttttttgg gtcagtcttt
000721 gagacttagg attgttggat tgggggagat ttgtcatata tgagtacttt gtgggtgcta
000781 cgaattgttt tcgcgccatt ttttcttctg gtttttggga gagcgtgatt agcacggaag
000841 gtagtttgtt ggatttgatt agttacgtcg gaaaggttaa atattagctg cttatgtcga
000901 ctacgatgtt gaaatgtctg agatttttct gtactgttgt ttcaatcaag aaggcaccca
000961 aactggcaat tccaagtaaa aaaaaactat gttttataac ctactaggtt cgtctaattt
001021 atgcatgatt gatcatttct tgcgttaata atatgggcat gattttctgt tgatgttttg
001081 ttttcgctcg tatgttaatc ctttagatat ggactttcag atgtttcctt gtagtattag
001141 ttttgatttg acccctatct gtatgtggtc ttttaatagt aaaatctaac catataaatg
001201 tgcagatatt tggagtaaaa ttcttctatt tacatttctt tcaacgactg ttatctgaat
001261 ttttttgcgt gcagtttgat tttatactct cttttgcaag taacgttaat aattttttta
001321 atcttaatag ttttttgtgt cagtttaaag ccttaagctg gtttgtaagt accaatgatt
001381 tagaatttta gatactttta ctttcgattg actgttacgt agcaggatca tactgcagaa
001441 tgctcatctg tgagctttct ataggctctt tactctctct tttaacatct gctatgctgt
001501 attgcaaact agctattcat tatgtttcct gaataatgaa aatgtgtgtc tgccggtctg
001561 cccctgtttg gataagaaaa tttcaagtac tggcatataa aggaaaatgg actatttcag
001621 gcaaatattc atttttgctt gttatgagac ttatattatt ttactttaga tacctttact
001681 atcaacaagt ggtggttgat tcatatccta cccttttttg tgtgtagagc tgtaaatgct
001741 taaccatgag cattgtagta tgtacatgag ttagttcctt gtagaactca aattatcgtc
001801 aaatcatcat actaaagtat ccgtacaaga ttcattgtac aaaacctttt tttttggtaa
001861 aatttttttc gataatgttt tggtaaaatt tgcatcctat caacaagcaa catgaaacca
001921 tgcatataca tatatgtaga gttgtaaatg atcctttttt tttatatcct caaaaagacc
001981 aaaacgcacg catatgtcca gcacaaacat ttgtagcaac atataaatct ttatgaggtt
002041 gatctttgtg cctaataatg ccttttgatg agagtgttct ctaaagcatc taagatacta
002101 atatttttct caatttggat tgtcgtgacc aattggactg aagttctcac cacatgtttg
002161 cagggcctgc tgatcaatgc aaatagactt gaaagaacat tatattctcg tgatcttatc
002221 aagtgaagcc atatctaatg aaagcttgtt atatttgttg ctttcttgat gagatttgtt
002281 gcttatgacc acttgtgtcc tctaatcatc caaagcaaaa aaaatcattc agccggtctt
002341 tacctctcca ggaattaaca cctgtgacaa gttattcctt gttttagggc aaatctcctt
002401 tggcaattgc accttcctgt cgatcgatta tcctgagcat attcctctta ttgagagaac
002461 ccttcagctg ggcaaatctc ctttggcaaa atacctatct atagtctgtc tattcgggca
002521 aatctccttt ggcatttagc ttagattgct tccgggcaaa tctcctttgg cactaccttt
002581 agcttcagat tgctctttgg gcaaatctcc tttggcacta ggtactctac tactatccgc
002641 attagatatt tggatcaaat atcctctgga agttagtggt attacatcat tatttcctgc
002701 aactatatat cgtggtaatt ctcctttggc attagcactg tacacacatt ggttctacca
002761 caatatcgat ctcagtgaaa gactgaacac caggaagtcc agaacgattc aaggtaattt
002821 gtcctctttt atggtgtata ttttttatgt gagccgtcat tttctataat atttattcac
002881 ttacaaaagc tttcctattt tgactcaatt ttcagaaata atttttggct ggtggccgtt
002941 gtattttagc atcttggaca ggaagctttc agattctgat tgttcagtct ggaagattgt
003001 tttgttattt atcaactcta tacatcagtg cgcctatcct aagaaggtga gcatgtagtt
003061 aatagtatat ttcctttaaa tatttctgtg tctattccat tatctaaaaa atatatattt
003121 ctgtgtctga ttccatgtga aaaatgacaa cgtactttgt tttagggctc ggaaagatgg
003181 atctatatgc aattgactcg gacactgagt catacgctga aactagtgac agtgaagaag
003241 accaagaaga atgtgaactt acatactgtg gtcatgccca gaacatcttg tccagcttgg
003301 acgagagcat tggaaagatc gataactttc taagttttga aagaggattt ctgcatggag
003361 acatagtttg ctctgcagct gacccatcag gtcagctggg ccgtgtagtt ggagttgata
003421 tgcttgttga cttggaaacg agctctggtg acataataaa acatgtcaac agcaagaaac
003481 tttcaagagt tagatccttt gtctctggtg attgtgtggt gatggggcca tggattggac
003541 gggtgatcag ggcatttgac ctggtcactg ttgtgttcag tgatggggca aggtgtgaaa
003601 tgctcttaag agattctgag gtactgaagc ccattcctcc aatccttttt gaagatgcac
003661 cttattttta ctatccaggc caacgtgtga gaattgttca tccttccatt tctaagtcgg
003721 gtacatggtt gtgtggatca tggaaagcta gtagagatga aggagtagtg tctcatgtcg
003781 acgttgggct ggtacatgtg aactggatca cctcagtaac aaatgtttgg ggaggtcaat
003841 catcaagtcc tccaaacttt caggacccaa agaagctcac tttgctttca tgcttccctt
003901 atgccaattg gcagttgggt gactggtgca ctctttcgga ttgcgaggga agtctctggg
003961 aaaattctga caaatcttgc ttcatgagta tgacctggaa gtccagctcc gacactcaaa
004021 cggctatcgg aacttatggt tcagattatt ctcaaacata tgttgttgca aagacaaaga
004081 gtagtgttga tgttttatgg caagatggaa gtacatctct tggtttagaa cctcaaagtt
004141 tggttcctgt gagtactctt ggtgatcatg atttttggcc tgggcaattt atccttgaga
004201 aattgacagt tgaggataat ggtagatgcc agcggactgg gatagtgaca agtgtggatg
004261 cacttgaacg gactgtaaag gtaaaatggg ctgtttcagt tgatagtgac actgtcagtt
004321 atggagatgg actcactgag gagactgtga gtgcttatga gctagtatta cacccagatt
004381 tctccttctt cactggcgaa gtcattatta gatctgctgt caacatagaa aattctgaag
004441 caaatcttac caatggaacc gtggcagtta gcagggagag cttggatacc tcctctgcct
004501 tcttatcatg tattggcaat gttcttggat acaatgatga aggacttgaa gtccaatggg
004561 ctagtggtgc gatatctagg gtaagcttaa ctttgagaaa ctttcttctc ttttttttgt
004621 tgctttgatt tattttattt acagaagtgt tgctttactt tataccagtt ttatttccaa
004681 actttgatga aacatggatc ggtccctggt cagactaatg ataacataac ttatcttgta
004741 caaatttcag gttcagcatt ttgaaattat tgcattagat aggattctag atgattctct
004801 agaatccatg atcgaggagc acactactga tgatttggta gacatggctg agcaggagaa
004861 aatgcacctt gaggatacta aggtccgctt ctgtctacaa attccattgt acggttatta
004921 aacttatggg ttgaaatttc atcgatgatt tatcattttc attcagagtg cgctggaaga
004981 atctgctgga gactgtacag gatccttgcg caaagccact gctttcctct tttccaagac
005041 agcatttaat tttctgacaa atgtggcttc tagtttgttt ggtgctcatg attcaacatt
005101 ttccagctcg gtaagttcta tttctctcta gatgatgcaa gctaaatttt tatagaattc
005161 tgagacaacg gcattgtttc aggtcaatgc agattctcag tatcaaattg tgacgacagc
005221 agaactgcag ccatctgcag aagatatctc tgaagagaaa cagaccatgg agctgataac
005281 acagtttgag aagccaacat tagcttcaga aaatgccatg acaaaaggat ttgatgttgt
005341 gaccgactgt tctgatcacc actttgtcaa agaaattggt cacgaaaatg taatggttta
005401 cttagtgcaa ctttctttct ttatttttct agcaaattgc aatgcctatt aatattggag
005461 tatatgcaat tcaatgtcat aataattatt tctgttcttc taggtcaaaa gaggttgggt
005521 gaagaagata caacaggaat ggtcaatctt acaaaacgat ctgccaggtt tgttttcttc
005581 tctcattgta tagtttattc agttgcaact cttcattaag tcttgttgtt aaatttgata
005641 ttttggcata tgtttatttt aattttaatt tctgagctag catggcttaa tactgacgat
005701 ccttatatcc cactattttt ttacttgata tgacatgtat atacttgtgg tcaaagatag
005761 gaataagtta aaattttcta cattccacag gatagcatag catgtgagaa tcccagaaac
005821 aatcaatctc ggtagcaagt atgcaaggag atgagtggag ttataaaggc aaaatttatt
005881 ttagttttat catgtatgtg acctgttatt atttaataaa tcattacttg ttaatcagtg
005941 ggaaaaaatt tagtcatggc acaagaattt tgcaaatgca aggacaactg tatagactgg
006001 aaattttctg ccgaaaactc agtaactcat tctagttttt agttgcaagt aacatcttcg
006061 aataatgatg gaatatatag tttcttgtac agcagttata tgatgttctt tctttctatt
006121 acacagatgg tattcatgtt agagtttatg aagaaaggat ggacctcctg agggcatgcc
006181 ttgtaggtgc agctggaaca ccttatcatg acaatctttt cttctttgat attttctttc
006241 ctcctgatta tcctcatgag ccacctgtaa gttcttcatt tttcattgct cttacctaca
006301 tcttctattc cagattttct tgctgctgaa cagtaaataa ccatgttcaa ttttttcccc
006361 cagtctgttc actaccattc cggtggcctc cgtttgaacc caaatttgta tgagtctggc
006421 aaagtgtgcc ttagcctgct caaaacatgg gcaggaactg gtagtgaagt gtgggaccct
006481 gaaaattcaa ctgttcttca actgctgctg tcccttcaag ctcttgttct caatgaaaaa
006541 ccttacttca atgaggctgg ctatgacaaa ttcatgggga aagcagatgg agagaagaac
006601 tccatcactt acaatgagaa cgctttcctg ctgtcatgca agtccatgac gtacatttta
006661 cacaagccac caaaggtgcg tctcagctct ggaaattctg tacacagcaa tttctgaaaa
006721 aaagagccat tatggtgtcc atactgttgt tttcttctcc taatttaaat gatactcaga
006781 agtcaaatct cctatggatt ctcagggaaa aagataattt ttgaaaatac atttttacac
006841 atccatgttt cagaatgatt ggtatagttc aaagaagttt ggaatcttgt gaaaccaaaa
006901 tctaaacgct gttcagaatt aagaatgcta tagctttagt ttgtaatgct tcatgtgaat
006961 tactggatct cacaagagtt tagtatgttt aatcttatat ataaccaagt cagctgtaag
007021 agtcacccct ttaagaaata agatgtgtat actgatagtt ctttcttttc cttgatctag
007081 catttcgaga attttgtcaa ggagcacttc acttgttgcg cgccgcacat tctggatgcc
007141 tgcaaggctt atctcggcgg cgatcttgtt ggacatgctc gtgacagcgc ctatatatcg
007201 gatgacggat gcaagaactc ctcaaccggt ttcaagataa tgctagccaa gctcttgccg
007261 aagcttgtca ccaccttctc tgaagccggc atcccctgca gcccgtgact catggcattg
007321 tgagtttgtg acactggact actgtgtatt tgtgacaaaa tcgggacacc aatatatgct
007381 gtgtatgtac tgtatatgtg caagctttgt gactttgtgt atcccaaaat aaaatgctgc
007441 ctggtttgta tgatacttaa catggtgatg tctgttgtaa cttgtaagtg tggttgaggc
007501 agctggtgtg gttgggtttg tggtcagtta ctcagttcac gtgtgttttg agcatgtgaa
007561 gtatgt
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
