cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK112003
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os05g0182500
(
IRGSP 1.0
)
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RAP - Chromosome No.
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5
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RAP - Location, Length
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4,958,349 -
4,964,952
( + )
;
6,604(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
4,958,349 -
4,958,560
( + )
;
212 (bp)
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Exon 2
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Location |
4,959,379 -
4,959,510
( + )
;
132 (bp)
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Exon 3
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Location |
4,959,602 -
4,959,627
( + )
;
26 (bp)
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Exon 4
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Location |
4,961,614 -
4,961,703
( + )
;
90 (bp)
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Exon 5
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Location |
4,963,669 -
4,963,757
( + )
;
89 (bp)
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Exon 6
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Location |
4,964,556 -
4,964,952
( + )
;
397 (bp)
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Chromosome: 5
, position: 4,958,349
- 4,964,952
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 ctactcgcta tcctccttcc tccatgattc ccttctcgaa tcttctcact ttcttctgaa
000061 gtgctccgct ccgctccgct ccgatccaat ccactccgcc cgagtccccc acccatcggc
000121 acccaccagc gcgagggtgg gtggccatcg atcgatcggc ccatcgccga ttcccgcggg
000181 atctgcggcg gcgcgggggg atttgatcgg aggtgagaac cattcgccgt cctggttgtg
000241 tatggttcct cgcgattgtt ccctcgcaga ccgtgaaatt ggtcgtcgtc cgtggaggat
000301 ctgtgcgcat atgaccgttt gtgtctagtt gaattcacag tttgtggtga tttgtttcgg
000361 tgatgaggat ttgggggtgg tggtaggctt tatttcatgt ttgttggggg tgattggttg
000421 gggggaggat gagggttgcg gagggtatgg gcgattgatt ggtggagttg ttgcgcttgt
000481 cttcgttggg ggaaatttat gggtccagat ttgcagtagt ataatggcct tgttgggttc
000541 atcggatgac ctcggtctgt taatctaagc atgggaaata gggatggaat ggtgtgcttg
000601 tcatgtttat gtttcgcctt ttcgtttcat ggagattttt tctcgtgatc acaggatgta
000661 tgggttgttt ggaagggaat tcctgtacct atttgtgctc agagcctcag atgcaactct
000721 tgtgcatgtg ggattctcca agactccagt tactggctgt ccaaacttag tcgagaacag
000781 gacaaacgga aaatatgaaa attctcatat gttacttttg caacatccat aaaaaaattg
000841 tatacccaaa gcaatttttt cttctgaaat tacaggctac ttcaacacta ttactagcat
000901 agtgatgaac tgccttgatt gttagtatgg attggtctgg ctagtaggtg tcatgggtaa
000961 actaaagaat ctcagtgtag gtttcccatt ccttctattt agcttatttg gtgacttggt
001021 atctacacag ggtgaatatg tcgacgccag caaggaagag gttgatgagg gatttcaaac
001081 gactgatgca ggatcctcca gctggcataa gtggggcccc acaggacaac aatataatgc
001141 tttggaatgc tgtaattttt gggtaaggtg ttagacttaa gagatatgtt ttattccttt
001201 cggttttatt ttgatccatt atacttagtt gtcaattatg tcttgttttg cagccctgat
001261 gatactcctt gggatggagg taaggaattt aaagtctttc cttttatttg gggtttgcat
001321 ttgggacttg ggagagtaat cacaggcatg atatggggaa atttaactat tttccacttt
001381 tagttttggc aattaaccaa atacccttct tagatttgca cttaagaatt tgccactgga
001441 gagagaagct tttgtaattt tttgccactt tctgcactgt tcagtgccac atatacatgc
001501 cagcatggac caggcacacg aaatgactaa tctacccttg ttagtaatgt ctgtaatata
001561 agctgagtca ggaataatat ttggacaaat tgctttcgcg aatcagttgc atcggtatgg
001621 atgctgttca cttttatgag gtactatatt aaagaccgag tacctccaca tcagttaaca
001681 aatcaatatt tgaaggaata gatccactga gatggttata acaaactttc aaaacgatac
001741 ttagattgag ttcttttgtt cactttcaca acttatctct ctcgtttttc atgtgtacgt
001801 ttttcaagct gctaaacggt attccaattt ggctggtatt gttgggatgg tgccacctgg
001861 agtgagctcg attaaggtgt acgatagcat ggtttggaaa tatttctctc ttcacgtaaa
001921 actgagcaaa gaattagcgc atgactaatt tagtttgagt tttaagaaat aaagaataga
001981 ttaatatata tttttaaagt aacttaattt tatttaaaaa gttattaaag aaacgtgcga
002041 aaaaaaatga gggagtagaa ctcagactgg cggaggccct ggttccggtt tttttcagtc
002101 caaccgccgg tccggtcggt cctaataact gtgagtagaa gttagaaaaa agacatccga
002161 atgcagcctc agaaagttaa tgaactgact gtaacatgaa tggtgccatt gatgttgttg
002221 ccttataaat ttaaaagggt aaaatgggaa gattgggcag gttgctggtt tctcttggta
002281 tctttccagt gaatgaatta tgactaagat tcaatgcgga caggcttagc aactgagaaa
002341 cttaccacta gctagaaggg gtaggttggt catttttcac gttggtccat gttggcatgc
002401 acatgtggca ctccacaggg caaaaagtgg caaaaagtta caaaagcttc tctctctaat
002461 ggcaaattct taagtacaat cttaagaagg gtatttggtt aattgtcaaa tgtaaaagtg
002521 gcaaatagtt aaattccccc atgatatgac gcatatcttg tacttcattt tacttctgtt
002581 ttcatattca gagatagttt tgcttgcata attccatttt tgttgttgat ataacaattg
002641 gttcatttaa ttaataggca cttaactttc tggacaaatg atacaattta taattatcaa
002701 acaaatagaa tgtatgaacc tcattttttc tgtcagttca acccacattt ctactgtctt
002761 tgggatttta tgtctcggaa tgtatattct acactttaga cacttttctt tttgtctaca
002821 atggtccagc cttggagcat gtagttcaaa cattttaggt taattttaat taaaacttgt
002881 aattttcttg tctaatcgag tgaagcatgt gttttttttg gggtgacatg gtttggagat
002941 cttattttga ttaatgtttt gaattcaaat atatgatagt ctaaatcgtc aataaacatt
003001 tgttaaaacc ttttcatcat tagctgatca tgttttattg gttctatgac tgagaaagtg
003061 cttgtttttt ttaaagagcc tctgtacaac ataaataagg tgattaaccc gttttaaaca
003121 gtctgttggg gaagtcctct ttgccaaacg tccatttgat atttttcctt tttgtattta
003181 ttggcatttt gttcttgtac gtgtcaccaa ttgtactctt ttacatgtta acactgtcaa
003241 attatgttta cttcgccatc gccaggtacg ttcaagctga cacttcagtt tactgaagat
003301 tatcctaaca agccacctac agtgcgattt gtttctcgga tgtttcatcc taacagtaag
003361 cctctctccc tgctgtttaa tacttgcctg tggcatggtt cctgtttctt acaagttata
003421 agtatttatg tggcatttcg gaacaatagt ctaacatccc gagagacgta caattaagaa
003481 ccaggctaaa ataagatatg agaactagtg agacaattga gctgaatctg gatggctcat
003541 gtcaaggcca aatgctacag gaaacctatg acagttccac ctccaccttc tagtgacgtt
003601 ggcagtcctt tattctacat cgttgaaaag ctgacctagg taatttctaa atgtatcaaa
003661 caagaatcag ccaaaaaata ggatccagaa ctagcgatct tattcatgga ttggatctag
003721 atgcagcata gaaggccacc ctgattctcc ttgcttccat gccatccaaa attattttgg
003781 tcactgagat caatgttcta gttatcccat tttagtttct ttttctatct aatgcagaag
003841 ttggttgtta aggcggtaag gcatcctaag gcgaccccgg actgccttat cgccatagcg
003901 gtaaggcgta aggcgaggcg acgccttagg cactccatac caattagatg acaaacaaaa
003961 taatctaata tgatagcaaa tcaaagcttg gcaactcttg agcccactag atggttgtaa
004021 taattactta accagatatc aatttattaa ctaaaagaac accatcctat aaatacagag
004081 tgagggtgca tgggggaaga gcaaacgggg taaatatgtg ctaagtacta actactaaca
004141 gggagtcagg gatgtaagcg aggggcaggg agtaaaacag agcagtagag ggaggattat
004201 agtagatgag atgtagagga gagggaggaa aaccacaaca tagcagcaaa tgagggagca
004261 gagtagagga tgtagaagag gggggaggaa acaccaaaac aagcagcaga ggaaggataa
004321 gaacagggta gaggaaggag caaagcagga tcatgtagag cagagaaaga aacagaggaa
004381 agaagagggt ggaggaaaga ggagaaagaa gagcgtgcct gcttagtttt tgtgtcaatg
004441 gtgaggacca ggatgatggc gcaggtgcag aggaccagga cgatggcgca ggtgcagagg
004501 accaggacaa tggtgcaggc acaggatagc cgcaggcaac aacttggatc gccgccaggg
004561 atggagatgt cgcgagggat ggatcgccac agcctcagac tccagcgacc ctctttctgt
004621 tgttttctcc ttgatttggt gggatatggt gcgtggggac cttttcaccc caaaaattgg
004681 cgcttctgtt agttctgttt cacgcccagg gcccatggcg ccaatttttt cgggctcttc
004741 aaccaatcgc ggcaaaaacc acgccctcga cttcctgtgg cgttgccttt agccattgta
004801 gcgcctaagg acgcaatatc gacgccgtag cggcgccttg ggcataaggc ggacgccata
004861 agcaatatgg taaggcgggc cagacgccct gactcctggc agcgccttac cgctatagcg
004921 acgctatggc gatgccttga caaccagcag aacattgaat aaggtatcaa atatccaatt
004981 gttgcaatta tgctgttatg ggcctcatcg caggcagtta agagtatact agcaaatacg
005041 cagatccaat tagtacttgt ttgatttgat gactagcttt gctctcgaat gtcataattg
005101 atgactagta taagtttact tgcatcaaga tataaaggac tttacagata tgcagtatat
005161 ctgaagctta tttaatgctt catacaattt atgtaaatac ttaaaaagat cgacttcttt
005221 tgctacttgt gtggaagcac ttatgtacct tagaatagca tgatattgtt gtatctccat
005281 ttgttttact ttcctaacat tttcctttta tcatgtacag tttatgctga tgggagcata
005341 tgcttagata tactacaaaa ccagtggagc cccatatatg atgtagctgc tatactcaca
005401 tccatccagg tagatgatgc cttttttggg ggtattagca tgtcatgatg tcctgtcatg
005461 tttgttgcaa tattttgtat catgtttata attcgtgctt ctgattttgg tcctgtcttt
005521 aaaaatattg agcaaactca ccaatctagt ataagtgaat tgtcactaac ttaattgttg
005581 tcgccttaaa atacacatgg tgtttcctta tagatagtct gcttttcctc cccacatgct
005641 ccattgttaa gtagtaagct atattcactt gaataattat ttttctttgt tagaggcact
005701 atcacgcgat atacctgtgg aagggtttca tcttgagagt agagatatta ggcctctgtg
005761 actgattatc actattcagt attaagtgac attggcacgt ggggtatata tacataaaaa
005821 agaataatat ttccagcctc tgcttagttt ttgattctgg tgacaactat atataggcca
005881 cgaagagtag acggctaact tctatatgta ggcaaacttc tataacagta actttagtgt
005941 ggtgaggccg cctgtcaata acaacatatt atctttatat gtttttcata tacatggtga
006001 tatttattaa tctatgctct atggaaaata gtatagaaca caataatttt tatatcagtt
006061 gggatacttg catatcttgc ttctgtgaat aacaaatgca tatcacaaca atgcatattt
006121 catggactca agacattgac atattacagg caatttcatt gatttaactg ttcagtactt
006181 ctatttcctg ctttgtatta tttccagtcg ctgctttgcg atccaaaccc aaattcacct
006241 gccaactctg aagctgcccg cctattcagt gagaacaagc gggaatacaa ccgaaaagtt
006301 cgtgagatag tggagcagag ctggaccgcg gactgatcca ctccatctaa ccatatgatg
006361 cctgatactt aaaacgctca tcttttcagt gtgtcgtgta ccaaactgct tgtaattaaa
006421 atgctaaaac agtaaaacgt gcttactgtt atgtatgccc ttcccgaata cgaggaaggc
006481 tttggaccat gttgaggacc atatggactt cttatataac atctattgtt gccagctact
006541 aagtgttaaa tgctatattg agtacgaagc cgtgcctaaa attcaatgag taattctttt
006601 cgcc
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.