cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK107763
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os05g0334400
(
IRGSP 1.0
)
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RAP - Chromosome No.
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5
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RAP - Location, Length
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15,685,760 -
15,691,438
( - );
5,679(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
15,685,760 -
15,686,087
( - );
328 (bp)
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Exon 2
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Location |
15,686,288 -
15,686,347
( - );
60 (bp)
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Exon 3
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Location |
15,688,184 -
15,688,381
( - );
198 (bp)
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Exon 4
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Location |
15,688,490 -
15,688,671
( - );
182 (bp)
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Exon 5
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Location |
15,689,277 -
15,689,360
( - );
84 (bp)
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Exon 6
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Location |
15,691,163 -
15,691,438
( - );
276 (bp)
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Chromosome: 5
, position: 15,685,760
- 15,691,438
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 agagcgctgc acgacctccg cctccccaat ccgtcccgtc tcctcgcccg ccgccctcga
000061 ctcccgtctc ctcgcctgcc gctggcgccg atctccatcc tgctagcaga ggtggcgccg
000121 gcgtcctcct gctcccgccg cattcgcatc ctaatccatc ccatccggcc tcggcctcga
000181 atttcgtctc ctcgcccgcc gcttgcgccg atccccatcc tgcgagcaga ggtggcgccc
000241 ggcgtcctcc ttcttccacc gcatcgtcgc tcgccggtga gcatccctcc ctacccacac
000301 ctcatcaggt attctgcgtt atccctcaaa aagtttgggg gttcaaccga aacagggtta
000361 gatctgcctc tgcccagctc cacctacttt caagttgtta attttgattt ccgtttttag
000421 cagatgtaat ttggttattg aatctcatcc aaacaccctt agaacgaaaa atgtaagctc
000481 acataatttg tactcatcca aactcacata aatttcttaa gaagaatcta gaccacaaac
000541 tacccatagt cacacaaaat atctttttat caaggtatat tcttataagt aatttttatt
000601 ccacaaaatt ttctaaagga catactgtga cacttggcat gaatctaatt taacattctt
000661 tctttatcag gttataaatt gaaaccattg aacgtacttt gtcttcccgt ccctaaaaca
000721 ttgtgatata tctgtaatat tttaatattt ttaattttaa aaataattta gactaataat
000781 atagatattt aaattaggta attagtaaat tcaaatcaac tatagtttgg aataaaaaaa
000841 caaaatgata tatgccaagt acaatctaat aacaatagaa tgttagaaac aatatgaatt
000901 ttgctagttt agctagttca aaaatgaaaa tattgaatta gcaataattc atagtgaaac
000961 tacagtttag aaaaaaaaaa aagcacacgg cccagtccag gcccaatcag gaaaagtcaa
001021 cgctttcctc ctctctctct caccgcaaat ccacctcctc tcctcctctc catgagcggc
001081 tgagccaggg tccctttgct ctgctctctc tgcctccttc caccgccgcc ggcagtgccc
001141 taactgccgc ccttgacctc ccgctgccgt ctgcctccgt ccctcccaaa gatacctcgt
001201 atgaataaag caggttcttt gctcggccgg agttggatta tgggctcttg gtggtcattt
001261 ggttggactc ctgcttaaat agtcctacct tacttgcgtt ttccagcgat tccgggtgga
001321 aattttcaat tttcttgtct gccttttgtg tcattctgtg caaatcgatt tgttgagatt
001381 ttctttttcc acctagtaat aatagataga gaagcttatg tttgtggggg gagaataatc
001441 ttgtctgcct gtcaggttct gcaaagcaaa taagggttgg aggagctgat ctgtgcagac
001501 cattacttct tcaaaatgtt atatgcagtt ttaattactc tattactgaa gtatgattgt
001561 tctcactttc attactctat tgctgaagta tgatggttct cactagtgtt agctcacacc
001621 ctttatgatt tagtttgcac tctctgaaga aaaaagagag ggtgggcgtc ggtcatatcc
001681 aatgcatgac cagattaata gagctttatg tggatgtttg agcatataac catgtctggg
001741 atttcgcata tcctctttta ttttgttttc tatttaaaat ggttgcaaag ttcggtttaa
001801 aaaaaaatgg ttgcaaagtt caaaatttac atatgacaga atgggtgcct tttatactca
001861 taataaagaa ggaattgatg cctgtttggt atattggtcc gaaacgaccg gtgccaatgc
001921 ttttaaatat ttttcgctac tttagaaaat aattgatgat gatttcttat agagaaaatc
001981 caagaaatgc cattgactta gggatgctgt tctgttgaat tagatgctgt tctgttgaat
002041 tgctagtcca tcttttgttt aatccatgta tctaacaggc aaaatgggcc caagagttgt
002101 atttatgttc atcatcgctg taatgctttt gggagataca agcttggcct ttgataatgc
002161 tggtatgtgg tggtctttta ctgtttgatt atttgtctgc tgtaagcatt atgctgctta
002221 ctgtagtttc ttcaacttcc aatgtaattt tggtaatatt ctggaaatga ggttacttaa
002281 ctaaaggtag tggagatata aaactacaaa ttcagaatga atcttcatga aaataatggc
002341 atgcagcaat tgctactatt ccttgtttgg atcaaaatat tacaatccct ttggatgttt
002401 aaggacagta agtaggaact gaagttgacg agccgaatta tctgggtatt gactactccc
002461 tctgtcccat attatggtta cttatagcat tcatattttg tcccaaaata taactacttc
002521 tctacctact cccccatcat atctgggaga ttattcatat tttgtcccaa aatatttttg
002581 taactatttt tctacctact cccaaaatat agcattcata ttttgtccca aaatattttt
002641 tttcctcata tctgggagat tattcttgac agactgactg attgcctata tcatcaaatt
002701 tcatatatat atagatattt gtctgtactt ttagttagct tctgatgttc taccttcttt
002761 attttagttg gtgaaaagat ttcaaatatg gaaacatccc tgacaatgaa ggtagatcca
002821 caactatgcc aaatttgtga ggagtttgcc acagaagctc tcttctatct taatgagaat
002881 gagacccaag ttgaaatcat tgccactctt caccaagctt gttcaaaatt tccttctttt
002941 aagttggagg tattggcatt ttgcactaat cttcaacttc aagtcttcaa tcttctttta
003001 agataatgtt taacttctag ctgtgtcaat gcactaaaaa ccatttctgc atggcagtgt
003061 acaaaattgg tggattacta tgtttctctt ttcttcacaa aagttacttc tttaagccca
003121 gaagaatttt gtgaatcagt aagtctttgt cacaaagtga cattcattcg tctcccaaga
003181 catgaagatt cttgcgacct ttgccatgag gtggttgatg agatccttac tgatcttgaa
003241 aatcctgatg tggaggtatt tcttcattta atcaatttat tatttttatt cagtctatta
003301 tttgcctata atctgtgacc actggttaaa tcgatgtgtt ttaaaactac caaggagaca
003361 atttcagtgt gttaattact tgctatctga cgacatctgc cattcctctc ttcatgatgt
003421 gtttatgtac catgtagata ctgtgcttgt cttggaggtt tatatgtacc aaagtactga
003481 actaccagcc actccatcta gtatttatct gtaaaagcat gcagacaacc atggtaggaa
003541 aatatgtggt atgtaggtac ttattgtctg acccagaata tattgactgg ggatggaaat
003601 ataaaccaag gcaattgaaa gcaaatgatg catctgtggt gctaggtcct gaagagccaa
003661 tacacaatat gtgtgtgttg gaggcttagg gctctaggcc cctggtcatg tcagcccggc
003721 tccatggtgc tagttggtga caggagaagg catgtcctga gaagggcaca tgaccaaaag
003781 agattcggat aatgagagat aggtgtccta agaataggat ctttaaaacc aaagaagact
003841 tagagataat gagaaatagg tctcctatga atggaatatg tttaaacaaa ctaatagtag
003901 tattatctat ttatctgaac taaacaacct gaagctcaag aaaattatat tactatctaa
003961 gttcagttat ctggcatctg ttaacaacca tgtgttgatt ccacctatac taccatctca
004021 atatgatatc cctccctcgg ttatcagttt atcctcagga tgaaatgata aaaaaaatga
004081 catcagaaat tgaggatgtc ttctcatgag atatgagtgc ctctgtccat gtttccactg
004141 tgtgagaacc acctattaag gagtttggtg aacctgacac gtgaaagtct aacagtctgt
004201 tgtttgggca ttaagggttt gtgtcatttc cgatgttgtt atagattttt gtctgtcact
004261 tgagtacata tatcccattt ggcctattac aatacaaccc agcattgcta tgtgcagact
004321 agcgacccaa agatgattta gcttcaaata ttagatcttg tgcttctgtg cacttgtagt
004381 ggcacctgac catcatcagc cttttgtaac ttgaaagtta acaccagaga atttgtgatt
004441 gtagaacact caattggtga ccagcttgac aaaaatacca acacatatat tctccaatta
004501 ttaggatctt tgttgcattt tacctggttg ctggtgatcc ataactccca taagcctcaa
004561 aatatgcaac ctctggttga taatcagctc catcgtctgc tctttagctt atcagcagca
004621 gccaaaattt gattatataa aacttaactt tagagttgat cttgactttt ttttcatttt
004681 agtttatttt tcagcactgg cttttaagta tctaagaaca catatataaa agttttaccc
004741 acaaatggaa taccttttaa aattcatgtc cataatgcca tttgatattt gtttagaaaa
004801 aaaattgcat gcaaaggtct gcacttcctg acataccagt tcttgcctat gatttctaac
004861 ttatttgatg gtttcagtag tttagtctct acttgccagg aactattacc agtggctttg
004921 ttctttatag tgtaaaaacg tcatctttta tgcaacaaaa tgcacattgc aatattgttt
004981 tattattatt tattttgggg actactacca tgtgtacttt gcatctttaa ttgatataag
005041 tagtttctaa gaaaagaaaa ttgaaatttt gctttggttt acttttggca gcttaagata
005101 atcgaggtac ttctgaaagg atgcaacaat gcagaaaatt ttgtacaaaa ggtgatcgtc
005161 cagtgcccca aactcttttt cctttctagt ttcaatatcc ttttcttttg aaaattttac
005221 attctggttt gactgaaaaa actaagcatg caagtatcac atgtagtttc tttgacaaac
005281 tcccctaaaa tggagtatca ctttgattaa ttcagtatga tttgtctgaa ccgtgtctta
005341 ttccaattca gtgcaagaag ttgatcatcc aaaatgcacc aatcatacta gaacatatca
005401 agaagtttct gaagaagaga gatttctgca attctatcca tgtatgtgga ggcaagatta
005461 ttcctgctag agcaggagac cttggggccc tttctgctgc ctgaattatc ctgagcggtg
005521 tacagtttta caacaaagtt taagggtgta catgcaaaaa aatctgccca ggcaatgtat
005581 agtacattta tttgcgtctg tagaaaaata aagcaagcag tcaactttgt aaagaataca
005641 agcctatttt gttgtgtcca tagaacacga gggccatgt
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
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