cDNA ( Data source : RAP-DB )

cDNA Detail

General information
RAP - Accession No. AK106443     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os05g0113300 ( IRGSP 1.0 )
RAP - Chromosome No. 5
RAP - Location, Length 711,549 -  715,894  ( + ) ;   4,346(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 711,549 -  712,875 ( + ) ;   1,327 (bp)
Exon 2 Location 714,357 -  715,295 ( + ) ;   939 (bp)
Exon 3 Location 715,378 -  715,894 ( + ) ;   517 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No
KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXPro
FeatureNum
Genomic Nucleotide
Accession No
Genomic
Nucleotide GI
Genomic Protein
Accession No
Genomic
Protein GI
RefSeq Genomic
Nucleotide
Accession No
RefSeq Genomic
Nucleotide GI
RefSeq RNA
Nucleotide
Accession No
RefSeq RNA
Nucleotide GI
RefSeq Genomic Protein
Accession No
RefSeq Genomic
Protein GI
Os05g0113300 Os05t0113300-01 002103D12 109293 002103D12 16282 LOC_Os05g02240.1 AK106443 1150 AP008211.2 255675924 BAF16369.1 113578006 NC_008398.2 297605017 NM_001060990.1 115461710 NP_001054455.1 115461711


Chromosome: 5 ,  position: 711,549 - 715,894 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 atcacatgca cgagacaccc gcgcgctctc attttttttt caactacata caaactcaaa 
000061 tcctcctctt cttcgacctc gcctcctcct ccgccgccgc cgccgcattt cgccgatggg 
000121 gatgtcctcg ccggtgacgg aggcggagat ggcgacggtg aagacgtcgt ccaacggcgt 
000181 gtggcagggg gacgacccgc tccacttcgc cttcccgctc ctcatcctcc aagctctcct 
000241 catcctcctc ctcagccgcc tcctcgccct cctgctccgc ccgctccgcc agcccaaggt 
000301 catcgccgag atcgtcgccg gcatcctcct cggcccctcc gcgctcggcc gcaacaaggc 
000361 ctacctccgc gcgctcttcc cgccctggag cgcgcccgtg ctcgagtcag tcgccagcct 
000421 cggcctcctc ttcttcctct tcctcgtcgg cctcgagctc gacctccgct ccgtgcgccg 
000481 tagcggccgc cgcgccttcg ccatcgccgc cgcggggatc tcgctcccgt tcgcgtgcgg 
000541 cgtcggcgtc gccttcgtcc tccgcggcga gctcccgggc gccgcgcggg cgggctacgc 
000601 gccgttcctc gtcttcatgg gcgtcgcgct ctccatcacc gcgttccccg tcctcgcgcg 
000661 catcctcgcc gagctgaagc tgctcaccac ccccatcggc gagacggcgc tggcggcggc 
000721 ggcgttcaac gacgtggcgg cgtgggtgct gctcgctctg gccgtggcca tctcgggcag 
000781 cggcgaccac cggagcccca tcgtctccct ctgggtgctc ctgtcgggcg cggcgttcgt 
000841 cacaatatgg atggtgttcg tcaagccggc catggcgtgg gtggcgcggc ggtcggacgg 
000901 gcagggcggc ggcgaggtgt gggtggcggc gacgctggcg ggcgttctgg cgtcggggct 
000961 cgccacggac atgatcggga tccacgccat cttcggggcg ttcgtgttcg ggctgacggt 
001021 gcccaaggag ggggagttcg cggggagggt gacggagagg gtggaggacc tggtgtcgga 
001081 gctgctgctg ccgctctact tcgcgtcgag cggcctcaag acggacgtcg ccaccatccg 
001141 gggcggcggg gcgtggggga tgctggcgct cgtcatcggg acggcgtgcg ccgggaagat 
001201 cgtcgggacg ttcgcggtgg ccatggcgtg cgggatgtcg gcgcgcgagg cgctggtgct 
001261 cggcgtcgtc atgaacacca agggcctcgt cgagctcatc gtcctcaaca ttggcagaga 
001321 acgcaaggtg cctctaattt tcctcttctt ctactcatac atgtacaaat ttacctactg 
001381 gtataatacc aagtataata caattatcta aaaaaatact agcagtaagt accatgtatt 
001441 tttgttgatt ttatttttac agatattttt gttgatttta aatttagagg gttttttatt 
001501 gattttttta gaggtgtttt agctgaatta catactccgt actccctcca gtttcatttt 
001561 aattgacgtt ttggataatg acacggtcta caagatatat ttttgacctt atttttctat 
001621 tataatatat ataataaata aatgcatttt tacttttatt gtagtgcttt gaaagagaaa 
001681 tttttatatg ttgttttagt ttttttaaac taaatatttt taaagttatt gatggtcaaa 
001741 gttataaaaa aatgacctca atcttgttca aaacgtcaat taatatagaa ccacaggaag 
001801 tatcttttta gaggaggtat ttttgttgaa ttagttctcc atttttagag tcaaagttat 
001861 tgttgagttg ccctgcaatg agaaatggaa ggagccaaaa gaaaggctct tgtgaggaca 
001921 aaagcagagg tcacctgtta catgcttcct gttgctgttc tacactgttt ttttcctcat 
001981 tttctttttc ttttcttttt ttgagacgtg ctgtttcctg tgacttttga gaaattttct 
002041 tggttttgga agtatgaatg aatttcacag atgcaaacaa caaaggtagt ctgatccaca 
002101 tgaatcttct cttctggttt ctgaatagag tgcataggga agtgggacac actgaccaca 
002161 ctgttgtcaa gagttcaaag ttcaatgttg catttgatga tgcttgccat ccgtagacca 
002221 tccagagttg caatgtatag gtgcagtaaa aaagcagcct cttcttcaaa ctgcaccatt 
002281 cagagcttga agatgagcgg cgtgaagtcg ctgacaggtg ggctccattc agggcttgag 
002341 ggctccgccg tccatctgtc agtcatgcaa ccgagggcga cgtagcacta aataagtcaa 
002401 tgccatgcat tttgattttt tttttgggaa ctatgcattt tgattttgat tttggctcca 
002461 tccaagatat ggattttgaa ccaataaaaa tgcatccaaa acgagtgcaa aattattacc 
002521 catccgtttc aatttataag acgttttaac tttggttaaa gtcaaatagc ttttagttta 
002581 accaagttat agaaaaaagt agtaatattt tcaacctaag acaaatttat tatgaaaata 
002641 tatttaatta ttgatctgat gaaactattt tattattata aataatacta tatttgttca 
002701 taaatttagt taaaattaaa acaatttgat cttaatcata gttaaaacgt cttacaataa 
002761 aaaatggaga gagtaatgag taatgttttg tgtgttggtg taacacaggt gctggacgag 
002821 gagacgtttg cgatcctggt gctaatggcg ctggtcacca ccttcatcac cacccccaca 
002881 gtcatggcca tctacaagcc ggcgcgcaac gccggccgcc gccgcctgca ccaccgcaag 
002941 ctgcatggcc cctccgcgcc gtcctcaccg tccgcggctg ccaccgccgg cgccaaggag 
003001 ctgcgcgtgc tggcctgcat acacggcggc cacgacgtgc cggcgctgat caacctcatc 
003061 gagaccatcc gcggccacac ccagccgcgc cgcctcgtca agctctacat cctccgcatg 
003121 gtcgagctca ccgagcgcac ctcctccatc ctcatggccc gcgccgcgcg ccgcaacggc 
003181 gtccccttcc tccgccctcg ccgcggcggc ggcgaccagg tcgacgtcgc cttcgacacc 
003241 tacgcgcagc tcggccacgt ccacgtccgc cccatgaccg ccgtctccgc gctccacacc 
003301 atccacgacg acgtcgccgc cgtcgccgag gacaagcgcg tctccctcgt cgtgctcccg 
003361 ttccacaagc gccacccggg ccacggccat ggcgacgacc tcggccccga gtggcgcgcc 
003421 gtcaaccgga ggatcctgcg cgaggcgccc tgctcggtcg ccgtcctcgt cgaccgcggc 
003481 ttcggcggcg gcgagcaggt cagctcggag caggtcgcgc acggcgtctg cgtcgtcttc 
003541 ttcggcgggc cggacgaccg cgaggcgctc gagctcgccg ggaggatggc cgagcacccc 
003601 ggcgtgcagg tcaccgtcgt gcggttcgtc gacggcaagg aaggtagcga ggagcacgcc 
003661 gaggtgacgc tgcgcccgtc gaacaccaag aacgccgaca agagctacac cttctcaacg 
003721 gccatcgtcg acacccacaa ggagaaggta ggtacatccc atcatcatcc atggcgcagc 
003781 catgatcatg aacagctaat gaggttgatg aaattacacg gcggtgcagg agctggacga 
003841 ggcggcggtg gcggaattcc ggcagaggat gggggccatg gtgaggtacg aggagagggt 
003901 ggtggtgggg aacgtgatcg aggaggtggt gtcgatcggg aagagccggg agtacggcct 
003961 ggtggtggtc ggcaaggggc ggctgccgtc ggcgatggtg gcggagctgg ccgtccgggc 
004021 ggcggagcac ccggagctgg ggcccatcgg cgacgcgctg gcgtcggcgg ggcacggggt 
004081 gacgtcgtcg gtgctggtgg tgcagcagca tgacatgagc aacgccgacg agctgccggt 
004141 gtccatcgtc gtcgacggcc acgcccacga cgacggcgag ctcggcggca acaaggacat 
004201 ggccgagcca taaaaacaca gaaaaatcat tcactagcta ggatgatgac gacgatggtg 
004261 ataaagataa attactcctg tttaattagc tagcttgtaa tcgaatggca gaaaaaaatt 
004321 taaaataagc cagatttgct agtagt
/rice/oryzabase