Update info.cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
| General information | |
|---|---|
| RAP - Accession No. | AK071552 Link to RAP-DB ( IRGSP 1.0 ) |
| RAP ID | Os01g0206700 ( IRGSP 1.0 ) |
| RAP - Chromosome No. | 1 |
| RAP - Location, Length | 5,808,589 - 5,810,389 ( - ); 1,801(bp) |
| Exon (Data source : RAP-DB) | ||
|---|---|---|
| Exon 1 | Location | 5,808,589 - 5,810,389 ( - ); 1,801 (bp) |
| Related Rice IDs | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| RAP Locus | RAP ID | KOME Clone ID |
KOME Clone Name |
KOME Cluster ID |
MSU ID | cDNA Accession No |
RiceXPro FeatureNum |
UniProt Accession No |
UniProt Entry Name |
| Os01g0206700 | Os01t0206700-01 | 207436 | J023105C14 | 912 | LOC_Os01g10890.1 | AK071552 | 30768 | Q9LWM4 | CIPK5_ORYSJ |
Chromosome: 1 , position: 5,808,589 - 5,810,389 bp |
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| Sequence (Data source : RAP-DB) | |
|---|---|
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Nucleotide
Fasta Format |
000001 ggaggatccc aaatacacca atcgtgtctt ggattttccc aaacacagcg cgcactctcg 000061 cccttcacct ctcctccctc tcacccttcc attacatgga tcagggaggg aggaaggagg 000121 cctgaagtgg cgcagagtag gcgcttgtaa acaaatcccc ccatttgctt cttttgcact 000181 gaagaatccc tgaagaatcc agcaggatgg agaagaaggc gtccatcctc atgaaccggt 000241 atgagctcgg ccgcatgctc gggcaaggca ccttcgccaa ggtgtaccat gcacggaacc 000301 ttgcatccaa ccagagcgtc gccatcaagg tcattgacaa ggaaaaggta ttgcgtgtcg 000361 gcatgattga ccagatcaag cgagagatct ccatcatgcg cctcgttcgc caccccaaca 000421 tcgtccagct gcacgaggtc atggccagca agagcaagat atactttgca atggagtatg 000481 tccggggtgg tgagctcttc agcagggtag ccagggggcg actcaaggag gatgctgcga 000541 ggaagtactt ccagcagttg ataggggctg tggacttctg tcacagccgc ggtgtctacc 000601 accgagacct caagccagag aacctcctcg tcgacgagaa tggcaacctc aaagtgtcgg 000661 actttgggct gagcgccttc aaggagtgtc agaagcagga cgggctgctc cacacgacgt 000721 gtggcacacc tgcatatgtt gcaccagaga taatcaataa gaggggctat gatggagcaa 000781 aagcagacat atggtcttgc ggtgtcatac tctttgttct gcttgctggc tacctcccat 000841 tccatgactc aaatctaatg gagatgtacc ggaagataag caaaggtgat gtcaagttcc 000901 cacagtggtt cactactgat gtccgaaggc ttctgtccag gctgcttgat ccaaatccaa 000961 acattaggat caccgttgag aagctagttg agcatccatg gttcaagaag gggtacaaac 001021 cagcagtgat gctatcacag ccaaatgaat caaacaacct caaggatgtc catactgctt 001081 tcagtgctga tcacaaggac aatgaaggca aggcaaaaga accagcaagc tctttgaagc 001141 cagtgagctt gaatgcattt gacatcatct ccctctccaa aggatttgat ctgtcaggcc 001201 tgtttgagaa cgacaaagag cagaaggcag actcacggtt catgacacaa aaaccagcat 001261 cagcaatagt gtcaaagcta gagcagattg ctgagacaga gagcttcaag gtgaagaagc 001321 aggatggact ggtgaagctc cagggatcca aagaagggag gaaagggcag ctcgcgatcg 001381 atgcagagat ctttgaagtg acaccatcct tctttgttgt tgaggtgaag aagtctgcag 001441 gggacacgtt ggagtacgaa aaattctgca acaagggcct aagaccttct ctcagggaca 001501 tctgctggga tggtcagtca gagcatccat cactggcaca gtcatcaact ctgactcagt 001561 cctctaagtc aatctcgaga catgccattt aagtgcaacc tcataagaga tgcagtaaca 001621 atccattttc ctctctcctt ttccctttca tcaaagtgct gagcctgaga gtattctcac 001681 ttgagcatca ggcttagggc tctttgatga taatttttgc cagttttcct tgtatagtag 001741 cagtttgtct acatggatct cctgttcttt caccaataga aacagggaga ttgacaacag 001801 c |
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
| Hit Barley ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| AV834756 | bah15c09 | 507 |
| more... (Total Hit Count: 10 ) | ||
| Hit Wheat ESTs | ||
|---|---|---|
| Acc. No. | Clone Name | Length |
| BJ247188 | whf28a03 | 580 |
| more... (Total Hit Count: 10 ) | ||
