cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
|
General information
|
|
RAP - Accession No.
|
AK101975
Link to RAP-DB
(
IRGSP 1.0
)
|
|
RAP ID
|
Os05g0489800
(
IRGSP 1.0
)
|
|
RAP - Chromosome No.
|
5
|
|
RAP - Location, Length
|
24,164,736 -
24,167,202
( - );
2,467(bp)
|
|
Exon (Data source : RAP-DB)
|
|
Exon 1
|
Location |
24,164,736 -
24,165,022
( - );
287 (bp)
|
|
Exon 2
|
Location |
24,165,380 -
24,165,455
( - );
76 (bp)
|
|
Exon 3
|
Location |
24,165,893 -
24,165,967
( - );
75 (bp)
|
|
Exon 4
|
Location |
24,166,062 -
24,166,192
( - );
131 (bp)
|
|
Exon 5
|
Location |
24,166,734 -
24,166,761
( - );
28 (bp)
|
|
Exon 6
|
Location |
24,166,880 -
24,166,905
( - );
26 (bp)
|
|
Exon 7
|
Location |
24,167,030 -
24,167,202
( - );
173 (bp)
|
Chromosome: 5
, position: 24,164,736
- 24,167,202
bp
|
|
|
Now loading
|
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 acgccgcttc agtttgaaaa cccaccgcca cgtcgccgcc gccgccgccg ccgccgccga
000061 cgccgagatg gctcgcacga agcacccggc ggtgaggaag tcgaaggcgg agcccaagaa
000121 gaagctccag ttcgaacgct cccctcggcc gtcgaaggcg cagcgcgctg gtggtgagcg
000181 cgcgctctct ccccctctgc gtttcttttt ttttttcctt tttctttcaa tggcggtgga
000241 tggtgaagct tatgcccccc cccccccctt cccgcctctt gcttgtcccc tttgcaggcg
000301 gcacgggtac ctcggcgacc acggtgcgtg cgggagcggg tctttcgttt ggtgattttt
000361 tgattttgtg gggggatatg tttttgtttt gtatcttggc tggatggatg gcttgctcac
000421 cacctgtttg atggaatgca gaggagcgcg gctggaacat cggcttcagg tgcgttctct
000481 tgggggggtt tctagggtta ttcatgggct cgttggagct tttcctttct gtctcttgga
000541 ttccggggga cctgaggggc tcaatgtgtc ccttttcttg ctctgtttta ccgtgtgctg
000601 tactttcctc atcgttgttt tctgaatata ttataagaac agtagttgca gaaagatctt
000661 caattgctca tcagtcaaag cttttcttgt tttcattctg aaataatagc aaatccagtt
000721 tggtccatgg aggggttatc tgaaacatta tgaccataaa acatggtatt aagcattgct
000781 agccaagaaa tgtgtggttt ttagacacga tgttgatagg tgatttttat gctcatccat
000841 tattagtctt tgcatcgtgg gaactgattt agtaaacttt ctttagtgtc atggttcaaa
000901 tagcgtctgt tctacctaga tgataggtat ccatatggaa gtcttggctt tggaattgct
000961 ctccttttgt tctcctgtga ttaaataact ttaacatgtg tgtgaagcag ggacgcctag
001021 gcagcaaacg aagcagagga agccacaccg cttccgtcca ggcacagtgg cactgcggga
001081 gatcaggaaa tttcagaaaa ccaccgaact gctgatcccg tttgcaccat tttctcggct
001141 ggtgggtaca tcctgaacct gccttctctc tatatcaaat atttcgtagt gcaaacttgt
001201 gtgatggaag ctttttgtgc cgataaaatt tgcaggtcag ggagatcact gatttctatt
001261 caaaggatgt gtcacggtgg acccttgaag ctctccttgc attgcaagag gtcagtggtc
001321 aaacctgttt attataagtt tacaactgat ggcttagtta gggaagggtc agactgaatt
001381 atactgttta aattccattc tgcttcaaga ctcaagtcac ggctcaagag tgtaactgaa
001441 aaatgtacaa atcttccatg atcaataaaa tgaatatctc tgtgtgttga tttatgagtc
001501 agattgctaa attattatcc tttttcagta gaacacctat atactacaaa tatgcaacct
001561 ccctattttg ttgtgtctgt tcaagattgc tatcatagag tataccaatt tcagttcctt
001621 ctttccagcc atgtctgttt ctgcataacc aggaaaagga acaaagagct gacttaattc
001681 tcacaaaata aattatgtta tttacttgct gtcctgcaaa tttccagtgg ttttccctct
001741 cctgcaggca gcagaatacc acttagtgga catatttgaa gtgtcaaatc tctgcgccat
001801 ccatgctaag cgtgttacca tcagtaagtt gtcattctga atgaactttt ctctttcttt
001861 ttctcccttt atattattat gctaaatgga tatcatatat gccacagcct acatgatatc
001921 atatacgcat ccacttcaaa agcattctat ttttttatag gaataacatt ctaattgcag
001981 gatgattctt aatacatgtg tttatattta atgtcatatc tagttttcat actcttaaat
002041 ttatcatgat tattgattaa acatagggag aattagttgg tttgtgagtt ttgaggtgtg
002101 aaatatgctg cttgctattc cctgtaaagc ttatcagcgt tgtcattgtg tggtttaaca
002161 aataaacgtt tgttctgcag tgcaaaagga catgcaactt gccaggcgta tcggtgggcg
002221 gaggccatgg tgaaaatttg tttgcgagcc atgcagcatg atggacaagg agcaacatgt
002281 gtcgttgatt aacattttag aaagtagtgt agatgtatct tcacataggg atcaacttac
002341 ccttcgttcc cattctaatt cagttgatgt tagtatttac cttttgctcc atttggattg
002401 gtcgaattca ggatttcatc aaacagtcga ttgtgaaatg tgaaccagga attgttgtgt
002461 tgattgc
|
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
