cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK099004
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os05g0349700
(
IRGSP 1.0
)
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RAP - Chromosome No.
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5
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RAP - Location, Length
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16,541,129 -
16,546,763
( + )
;
5,635(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
16,541,129 -
16,541,272
( + )
;
144 (bp)
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Exon 2
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Location |
16,541,375 -
16,541,422
( + )
;
48 (bp)
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Exon 3
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Location |
16,541,510 -
16,541,595
( + )
;
86 (bp)
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Exon 4
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Location |
16,542,374 -
16,542,461
( + )
;
88 (bp)
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Exon 5
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Location |
16,542,970 -
16,543,055
( + )
;
86 (bp)
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Exon 6
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Location |
16,543,187 -
16,543,273
( + )
;
87 (bp)
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Exon 7
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Location |
16,543,811 -
16,543,876
( + )
;
66 (bp)
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Exon 8
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Location |
16,543,970 -
16,544,053
( + )
;
84 (bp)
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Exon 9
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Location |
16,544,173 -
16,544,234
( + )
;
62 (bp)
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Exon 10
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Location |
16,544,335 -
16,544,410
( + )
;
76 (bp)
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Exon 11
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Location |
16,544,489 -
16,544,551
( + )
;
63 (bp)
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Exon 12
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Location |
16,544,643 -
16,544,724
( + )
;
82 (bp)
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Exon 13
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Location |
16,545,423 -
16,545,499
( + )
;
77 (bp)
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Exon 14
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Location |
16,546,085 -
16,546,132
( + )
;
48 (bp)
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Exon 15
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Location |
16,546,264 -
16,546,763
( + )
;
500 (bp)
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Chromosome: 5
, position: 16,541,129
- 16,546,763
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 gcgtcttccc cacccacccc cagtctccaa tggccacctc ccacctcctc gccgccgcct
000061 cctccaccgc cgcctcctcc gccaccttcc gccctcccct cctcagcctc cgctccccgc
000121 cgccctcttc tctccgcctc aaccgtactg cctccccctc agttccctct ctctctctct
000181 agcttcttgt tcttgcagct agccccgctg tgtgtggctg atgcgtctga gctcctccat
000241 tcgcaggcag gcgccacttc caggtggtcc gcgcggccga gaccgacaaa gagagtaagc
000301 tcgggcgtct ccctgtttgt tcgattgatt tctatggcgt tttcgggttt tcctaatgtg
000361 cggtttgggt tggctgcgca gcgaaggcca atgcgcccga gaaagctccc gcgggaggct
000421 ccagcttcaa ccagctgctc ggcatcaagg gcgccaagca agagaacgtg agtctcccat
000481 cccgctccct tgcgctacgt tctaatctgg ttgcagaatg catatagagc actgggcact
000541 ggggttttag cagcatatag agcgctgcat atatgcatgg gcattgagca tgtcctacac
000601 tgggttcttg gtgtgtgctg tagcgggatt gccgatgcgc tacccagtgg cgtcctcctc
000661 gaaaatttcc tgtttttgga tgccatacat ggccctttct ctaccttttt gggagagcat
000721 tggagcattt ttcacaaatg ttatatgcag ctgcggctta tgatgccacg ccggcgcacg
000781 ccctacctta ccgcgttgtt gttgtttggg tcattttagt tatgtgtata ctagctaggt
000841 gccttgacca agttatggac attcatgccg ttcgttcttc aatagattga tgattagtga
000901 tacgctttgc tctatgcatc tttcttgttt gtagtagttc gcagtttttg ttaaggcaat
000961 agacgattct ccagattgtg acaagtttag tactaatggc tcatgttgtg gaaggcttgg
001021 aatgtcgata cataatcatt caaaatagaa aataggattt caatttgaag cattccttag
001081 tttgcaagct tttcccccaa aaccatgttt taagcactct acttcacatt tctagaagct
001141 gataagatat gcatcttttt ctctttttgc aatcaatatg ttcatgtatg gaaacaacta
001201 atgctatatt gctaatcaat taactctttc acatggtgca tataggacat atggaagatt
001261 cgccttcaac ttactaagcc agtgacatgg cctccgcttg tatggggagt gctttgtgga
001321 gcagctgcct ctggtatgcc tatggtacct ttcgttgatt ttatctgttt ggagagttta
001381 ttcttctact tcctaataat catttgagca cctgtagaat tggtaaacta ctttttttac
001441 tttataatca tgtgtgcctg tcactacatt gcaagcattc ataagaccta atcaacggtt
001501 taaaagtgtg catcgtccct aaatgatgaa tttactgaac cctagtaatt ttactgtgtt
001561 gccaatttgc ataatttaca agatctgtag gtctgcaact tattttgtga tgaagttact
001621 tcctgattat cgctgtatta gagtggaatc agccaaaaga ttgaatatat gtgggctagg
001681 ctctatgcga gataagtcca gccaaaagag ttctttaggg tggcaatggc atactattag
001741 ctcattgctg acagtacctg tacttatgaa cagtgttcct cctggtgtac aaccataaat
001801 ttattatttg cttatagttt attctaacct cttgtattca ggaaatttcc actggacagt
001861 tgaagatgtt gcaaaatcta ttgtctgcat gataatgtct ggtccatgtc ttacaggata
001921 cacacaggtt tgctgttagg acttggatat gttttatact tttatcgact ctcttcataa
001981 cttcatatta tgctgcatgg agaacttttt gcactgctgc taacaaatat gtcagctttc
002041 aaatgttcct gactgtagac aattaacgac tggtatgatc gagatataga tgcgataaat
002101 gaaccttacc gtcctattcc ttcaggcgct atatcagaaa atgaggtatg ccaatggagc
002161 tttttccttt cttttctgtg ctcatattta ttcacagttt tgtttagttt catcagctaa
002221 tgacaaatga ctactctgct gatttatgtg ccatcagcta tcactttaac attggggaag
002281 cacctttagc aatgggtttc tgacaaaata ctccctccat ttttctttat aagactaacc
002341 aacatcatac agaaaaatag agggggtata ccaatatacc ataagtcgta aaattgaaaa
002401 ggttatatat atatatatca tgtaataaac taataatctt attacaagcc atatatattt
002461 attgatcaac tatctacaca atacctcatc gattaaagaa gtggtggtgg gatggcagac
002521 ttactgccac cacgactact agtttttttt atatatatac actagagatt gcgaagtttc
002581 gatgcaatcc ctaatgatgt tgccaggtgc aactgtctca acaatcattg tgtcatgcaa
002641 aatgtatctc atgtatttac tgacggcaac gatttcatcc aggtcattac tcaaatttgg
002701 gcactgttgt tagcagggct tggcctgggt gctctgttag atgtatgggt aagtctccag
002761 ctaactgatc ttgaatatta gcaggttgaa aaagaaaacg ctcttctttg ttttcttaat
002821 tttttttgct acattttgca ggcaggacat gattttccta ttatttttta tcttgctgtt
002881 ggtgggtcct tgctttctta catatattca gctccacctc tgaaggtatt tgatacatct
002941 gttctgaatc acacaatccc ccttgttttt agtacagtac atcataatta gtcaacagct
003001 tttgattgaa aaaattgaaa aaaaaacacc cttgcacatt tcagctcaag cagaatggat
003061 ggattggaaa ctttgctctt ggtgcgagct acattggctt gccctggtaa attaacagtg
003121 cggatcttct tccatattga gtaaaaatct atgatattat atgcaagaaa ttagatgtat
003181 atcctatctg tatgtattct tcgcaggtgg gctggccagg cattatttgg aacccttact
003241 cctgatattg ttgtcctgac ttctttgtat agcatagctg gggtatatct tcatacgatt
003301 acttttcttg taacagtgta tgcttttcat gatcattgac cgtctttcgt gattttctag
003361 ctagggattg ctattgtaaa tgactttaag agtgttgagg gagatagagc tctggggctt
003421 caggttcttc ttctgtctgt agtgtagagt tatcacagcc cttttctgta gttccaaaga
003481 aaagcaatca tccatatcac ttaccttttt tcagtcactc ccggttgctt ttggtatgga
003541 aactgcaaag tggatatgtg taggagcgat tgacataact caattatccg ttgcaggtaa
003601 agacatgcat tttcattatg ttgcttttgt ttcaaacatt atcttcaagg ctgtatcttg
003661 gtttcattga ttatgtggtc catgttgtca acttgtcatg ctgctattta gcatgccata
003721 atgttatgaa tttattttat tataagggga gggctaaaca ttaaaggagc taccatgttt
003781 gctcagaggc ctaaaaatta ccatgttatt cagagaaaaa gagaaatatt tgcacggttc
003841 gatcatggtg ggtctatact ctatactgta acaataaaga ttgattgcta tagatggatg
003901 caaattataa ttgtatttat agaactagat gcagagtttt aagtaagaca atgtaggtct
003961 gcacaaccat gcggaaattt gatctggtta ctatttaaaa atattgtcgt ttaaatttcc
004021 agtgtaatga cgaaagtttt aaagaaacta taaaagggca gttgctgtga aacaagaaat
004081 gtttcctaaa tgttcagaat tagctttaga aatgtttccc gtcatcccat gtcagcaaac
004141 tgtccagcag ataaatgttg ctatgtcatc tttgtgaatt tccgtagcaa actgattatt
004201 ctgaggattg ctatgttttc gagtggcgac cctagtactt tcgaagcacc ataaaatatt
004261 gcattattct gacaaaatga attccatttt tcaggctacc ttttcagttc cggcaagcct
004321 tattatgccc tggcactgct aggactcaca attcctcagg tggtctttca ggtgagctgg
004381 tcgttccaat tagttctccc aaatggtttc ctttatttct ctggtctgat cccactcagt
004441 acaaaacatt tcaaactgct gtgaatatta acatttctcc ctgtaatgct agtgagtgaa
004501 ccttttaggt tagccatctg cagttcagac aatatcacaa tagtatggaa ttagtgccac
004561 caaactatgt atggcaaaaa catttcttct tacagtcctt atgacttaaa aaacaaacaa
004621 cactgcaaac taaactctgg ctgccaggaa attcagtcgc tctctgcttt ctactcactc
004681 tatttcatat tataaggcgc tctaactttt cctaagctta tagaaaaata tagcaatatt
004741 tcaacacaaa ataaacgtat tatcaaaatt tatttaatat tagatttagt gaaactaatt
004801 tagtgttata gatatttgta tattttccta tatacttagt caaacattaa aaaaattaac
004861 ttagaaaaaa ttcataactt aggaaaaagt caaagtatgg ttgtaatatg aaatggaggg
004921 agtagcttct aatcctcctc attttccttg gagcagttcc aatacttcct caaggaccct
004981 gtgaagtatg acgtcaaata ccaggtgcgc ttctgttagc ttcttcaatt cattcatctc
005041 ttccttcccc attctgaaac tgccaagcag tagaaactgg agacaaccaa cgcacagtca
005101 tctgatcagt gcaatcttac atttgccaaa tgcaggcaag cgcgcaaccg ttcttcgtct
005161 tgggccttct ggtgaccgcc cttgcaacca gccactgatg aaagcagcaa tcgccctgga
005221 ctgtgattct gtgacagcga agttttgggt ggaagatgca gattgatggt tctctgcaac
005281 tgttggtgga gctaggttca gcagctatgt tcgcgagtgt attagcgctc ttttggcggt
005341 gctgggtagt agaatgtaga atcgtttctt gttgattccc tgaactgatc cagatcaaac
005401 atcttctaaa ggttctgcga tgcaatgcta gctgcagacg ggagatggta cagggggtcg
005461 ttttgctact ttgccgccga tgttgtaggg tgtgtagaca gactgtagat gaataatgtc
005521 agtaacacct gtggggggtt cagtgctagt gggctgcaaa acttgagcac tgcttcgatc
005581 aaattgtgtc tttgattatg aaattatgga atccagcaca ggcaggtaat aattt
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
