cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK071060     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0946200 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 43,353,049 -  43,353,967  ( + ) ;   919(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 43,353,049 -  43,353,967 ( + ) ;   919 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os01g0946200 Os01t0946200-01 J023080K20 206910 J023080K20 6167 LOC_Os01g71790.1 AK071060 32077 AP008207.2 255672756 BAF07296.1 113534913 NC_008394.4 297598437 NM_001051917.1 115442204 NP_001045382.1 115442205


Chromosome: 1 ,  position: 43,353,049 - 43,353,967 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 acgaggaaca cacacacccc tacccgtctc tgttcatctc cacatcttgt cttctcgctg 
000061 ttgacttcga gcggagacta gactagctac tactcggaat ggggaaggag atgaatctga 
000121 tccgagaaga cgagtacggc ggcggcggcg tcgggttcga gccgacggag gacgagctga 
000181 tgctccactt cctccgtccg cagctgcgcg ggttcgcgcc gcgcgtggcg ggcgccgtgg 
000241 tggaggccga cccctgcggc gcggcgccgt gggagctcct ggcgcggcac gggaggcggg 
000301 aggaggggtt cttcttctcg gcgcgcgcgc ggaggaagcc ctcggtgcgg cggaccgtgg 
000361 cgggctgcgg cggcggcggt ggcggcggtg gcgcgtggat gcacagctcc accaagaacg 
000421 ggcagtccgt gaccgacctc ggcgtggtgg tgcggtggtg caggatcaac tactgcttct 
000481 acgtgcgcgg cgagatgggg cagcagcgga gcaccgggtg gatgatggcc gagtacgaga 
000541 tcaccgaccc gcggtgctac cgccgcgccg acgacggcga ggaggacgac ttctgggttc 
000601 tctgccatgt caggaagagc tcgaggcccc aagccgccaa gatctctcca gccaagccag 
000661 cacggcggcg caagcccgcc gccgccgccg ccgcggatgt ccgggctgcg tgatccggcc 
000721 gacggcggag atcacgaggt ttgcctcgcg ttgggattcg acttcggtta tacttttgct 
000781 ttggaattgt gttcctttgc tttattcctc ctctagcatc tgcccataca ttccgtgtga 
000841 tgaacactgc gaatcaaatg ggacgtttaa gatgttgttg ttgtactgat agcgtgattg 
000901 aattcatggc ctctttctg

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Wheat ESTs
Acc. No. Clone Name Length
CJ637407 whdp9f22 536
more... (Total Hit Count: 4 )
/rice/oryzabase