cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK119883
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os04g0401700
(
IRGSP 1.0
)
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RAP - Chromosome No.
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4
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RAP - Location, Length
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20,109,485 -
20,115,166
( + )
;
5,682(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
20,109,485 -
20,109,712
( + )
;
228 (bp)
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Exon 2
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Location |
20,111,002 -
20,111,424
( + )
;
423 (bp)
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Exon 3
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Location |
20,111,519 -
20,111,767
( + )
;
249 (bp)
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Exon 4
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Location |
20,112,104 -
20,112,154
( + )
;
51 (bp)
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Exon 5
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Location |
20,112,261 -
20,112,521
( + )
;
261 (bp)
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Exon 6
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Location |
20,112,681 -
20,112,733
( + )
;
53 (bp)
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Exon 7
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Location |
20,113,000 -
20,113,111
( + )
;
112 (bp)
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Exon 8
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Location |
20,113,223 -
20,113,480
( + )
;
258 (bp)
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Exon 9
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Location |
20,113,870 -
20,115,166
( + )
;
1,297 (bp)
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Chromosome: 4
, position: 20,109,485
- 20,115,166
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 ccagccggcg agagagagcc agccagccag ccagccagac agcttcttct tcctcgtccc
000061 tgtgttgctg cttctgctgc tgctgccgcc ttgtgtatag ccttgtgtat ctcctttggc
000121 ttcttctggg tacctgccgg ccggctaagc tagctgatcg ccggccgccg gctctcgttg
000181 agctcttctt ggtgccggcc gcggcgttgt tagtgtcgtc tttgctgggt acgtaagtgc
000241 tcaccctttg tattttgctc tccgtcgcaa aatgattcat gagctgtagt tctgctggca
000301 ttttctctct ctttctgtct ttctctcttt ctcatttgat acagtgtatg gcaaattgca
000361 taacaatcaa agttattggt gttgggagag gcaaatccgc aataatttat aaaatccgaa
000421 tcaaaccaaa agattttgcc tgtgatctta tatgcaaaca tatgaagaaa cgtttcatat
000481 gtacaagcag tataatactt tcttcatgcc acggtacttg tctttctaga ttgtttagta
000541 caaattaaga tttgagaagt agtactctca aatgataagt accgtggggt aaaatttgaa
000601 ctccaaagaa ataactattt tgggacagaa gaatgctacc actatgtaga aattaatggt
000661 tctgacgtca tagggagtgg tgtctaaggt tggaagtgaa gttacatcca gagaagttgg
000721 tttgtgattt ctgtatccag tttattatta tcccatttgg aactgagtga ggtagggtgt
000781 aacatgaccc aaggggatct gaggagtgat gtgactgcta ttggactaat tctttttgtc
000841 catgagcaac agcaatctca gggttggtgt atgtgacttg aaggtcaaat acagagtgga
000901 tattatacta gtattagaac agagtatttc tctgctcctt tatctttttt taaaaaatag
000961 gtcatgtctt ttaagtagta tatatctgag gtagtaaatg cccatttgga ctttttgtga
001021 agagtgagtt ggtccactct aattttgtaa ctccattatt aaagattaat aaaattacca
001081 ttactaaaac aatcagggct tattatgcat accagtgaca gttcagagca cccttgaaaa
001141 tatgttgttt tgacacatac acatcataat agcatagtaa tacctactac ttgtacacca
001201 tgagctggct ctcctctaag ttgttggcat cttccatatg aaccaaaatc tgagtaataa
001261 atcaccatat tatgcatgca tcaattgcaa gcaccaagaa ccaagaatcg atagcattta
001321 tgctgctgat ttactaggca gcaaaggagg ccaaggaaat caatacaatc ctttcttgag
001381 cattttaatc actcctctcc ctttgcttag caacaaagga tcccatcttc tttgtagacg
001441 tcaacaaaga tgcagaggat tttgcttggt ttttcacacc atcgccgacc tcagaatcaa
001501 agccattgac cgtgcaggct gcaggaagat cagcagcaag ctaagctagt agcctccaag
001561 gtgcccggag atgtcgtcgg cgctggaggt ggagggctcg ggctcgccgg gcgtcgagcc
001621 ggcggcgacg gcgacggcga gcaggctgaa gcggcacgac tcgctgttcg gagacgcgga
001681 gaaggtgagc ggcgggaagc accacggggg gtcggcggtg agctgggcgg tgacgctgca
001741 cctggcgttc cagagcgtgg gcatcatcta cggcgacatc ggcacgtcgc cgctgtacgt
001801 ctactccagc acgttcccgg acggcatcgg ccaccgcgac gacctcgtcg gcgtcctctc
001861 cctcatcctc tacaccctca tcatcatccc catgctcaag tacgtcttca tcgtcctcta
001921 cgccaacgac aatggcgacg gtaagaatcg atcaagaaaa cctccttctt cttcctcctc
001981 ctccatcatc gatcgtctca gcatctctga attgaatctc tgatgacgtt gcaggtggca
002041 cgttcgcgct ctactcgctg atctcccggt acgccaagat caggatgatc ccgaaccagc
002101 aggcggagga cgccatggtg tccaactaca gcatcgaggc gcccagctcg cagctgagga
002161 gggcgcagtg ggtgaagcac aagctcgaga gcagccgtgc cgccaagatg gcgctcttct
002221 tcctcaccat cctcggcacc tccatggtca tgggcgacgg caccttgacc cccgccatct
002281 ccggtaaaaa aagaaataaa atcaaacgca tcaatcgatc gattattagt caacatttat
002341 cacattatgt cagtggtaag agttgggttt cgggcgatct tggctgtgtt ccgttgttgg
002401 tttagcggca atcggtcacg cttagtggtg gccggttcgg tgctagcctt cttctggggc
002461 tgtgtgttgg tgctgtcggt gtgtgggtgg tggtatactt ttttttccta gttacgatct
002521 tccgaggtta taatcttgca attttttcct actctatctc gttaaaaaaa acatttatca
002581 cattatgtgt ataccttgtg ttgtgtgctt tgcctgcagt gctctctgcg gtgagcggga
002641 tcagggagaa agctccaaac ttgactcaga gtatgtgtga cagaatttta tccagaattt
002701 gtcactgaat gattcagaaa atgttttgaa ccaaagaaac ctgacattta aattttcttg
002761 gtggtgtttt ttgcagcgca agtcgtgctg atctcggtgg ccatcctgtt catgctcttc
002821 tccgtccagc ggttcggcac cgacaaggtc ggctacacct tcgccccgat catctcggtg
002881 tggttcctcc tcatcgccgg catcgggctg tacaacctcg tcgtccacga gatcaccatc
002941 ctcaaggcct tcaatccgtg gtacatcgtg cagtacttca ggaggaacgg caagaagggt
003001 tgggtgtctc tcggtggcgt cgtcctctgt gtcacaggta attaattata cttaattacc
003061 ttccattttc tgacaaatgt tacacaaatg taactgcaga tgaatccatt cctaattctg
003121 ttgtagcctg tagtaaattt ttactgattc tgactagctg taagtaataa ccttaatatg
003181 attccatctg caacaggcac agagggaatg tttgccgacc tgggccattt caacatcagg
003241 gccgtgcagg tatgtatata tggacacaca cctgacaccc atgctttgtc tgagaaatag
003301 cagtagccag ggtttgaata tcgcgcagca cggttatcgt actaaccacg tgcggtaacc
003361 ttttcagttt ttttaaaccc tcggtttttc acggtaaccg tgatatcgct gggtagcagt
003421 aaccctcacc aaaacgcgag gaaggggaac cccttgtagt aacaacctgg atgtctgaac
003481 tctgaaacgg ctctggtttt ttctttctgt cgcagatcag cttcaactgc atcctgttcc
003541 catcggtggc gctctgctac atcgggcagg cagcgtacct gaggaaattc cctgagaatg
003601 tcagtgacac cttctacaaa tccatcccag gcaagtacag agatcgactg aattttggta
003661 gaacagagta tattcatcac tgacgcttac tctgctctgc taactctgtc ttcttcatgt
003721 gctgctgctg ctgcatcgca gggccgctgt tctggccgac gttcatcgtc gcgatcctcg
003781 ccgccatcat cgccagccag gccatgctct ccggcgcgtt tgccatcctc tccaaggcgc
003841 tgtccctcgg gtgcttgccc agggtccggg tgatccacac ctctaagaag tacgaggggc
003901 aggtgtacat ccccgaggtg aacttcatga tgggtctcgc cagcatcatc gtcaccatcg
003961 ccttcaggac caccaccagc atcggcaacg cctacggtaa catctctttt tctcatcatc
004021 agtttaaact tttaggttga actggttgat cgactgatat gatctattga gttgaaatat
004081 ggttttcaat tttgaaattt agtaaatttc gatatttttg accgaaatta tttaaaaatt
004141 tgattaattt tgaataaatt tgaataaaat tcgaccaagt tcacataaat ttgcaaaaaa
004201 aagagaaaat ttcggatgag ctatgtgctt ggcggtgggg ggcgaaattt ctgaaatttc
004261 aatccctgag ttgaactggt tgactaactg gtttgagctt ttgagttgaa ctggttgact
004321 gattgatatg agcttttgtg ttgaactgat cggtaactga tctgaacgtt tatgggtgta
004381 tatagggatc tgtgtggtga cgacgttcat ggtgacgacg cacctgatga cggtggtgat
004441 gctgctgata tggaagaagc acctggtgtt catcctgctc ttctactgcg tgttcgggtt
004501 cacggaggtg gtgtacctgt cgtcgatcct gtccaagttc gtggacggcg ggtacctccc
004561 cttctgcttc gccatggtgc tgatgacgat gatggcgacg tggcactacg tccacgtgcg
004621 gcgctactgg tacgagctgg accacatcgt ccccacggcg gagctggcgt cgctgctgga
004681 ggagaacggc ggcgtgcggc gggtccccgg cgtgggcctc ctctacacgg agctcgtcca
004741 gggcatcccg ccgctgttcc cgcgcctcgt ccgcaagatc ccctcggtcc acgccgtctt
004801 cgtcttcatc tccatcaagc acctccccat cccgcacgtc gccgccgccg agcgcttcct
004861 gttccgccag gtcggccccc gcgcccgccg cgtcttccgc tgcgtcgccc gctacggcta
004921 caccgacgcc ctcgaggagc cccgggagtt cgccgccttc ctcgtcgacg gcctcaagat
004981 gttcatccag gaggagtccg ccttcgctcc tcatcaagag atgatcgatg ccgccgccga
005041 cgacgacgac gaggcggcgg cgaggccgag gcggtcgacg agctcggccg tgcacagcga
005101 ggaggcgatc caggcggcgt cgtcggggag gacgacggcc agcagcgtcc agctccaggc
005161 gggcggcgag ccgccggcgg cgatggacgt ggaggaggag aagcggctga tcgacaggga
005221 ggtgggccgc ggcgtggtgt acctgatggg cgaggccaac gtgtcggcgg ggcccaactc
005281 gtccatcctc aagaggatcg cggtgaacta catctacacc ttcctgagga agaacctgac
005341 agaagggcac agggcactgg cgattccaaa cgatcagctg ctcaaggttg ggatcacgta
005401 tgaaatctag gcatttgata catctgatct gatatcaaag tatacatata tatgtgggaa
005461 aaaaaatgag cctagtataa accatgggtt ttgttgatga tgctgatgtt ggaagagagg
005521 gcaaagtgcc ttttttgttt gttgaataag tagtttcagc tgaaagtgtt ggcaggcagg
005581 gagggtttgg tttttctttc gcctctgtac agtgtggttt gtgtaaacgg cgtgtgccaa
005641 cttgagtaga aggtttctca ctggtggtgt gttgtccatg ct
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
