cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK119530     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0320700 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 14,994,662 -  14,996,406  ( - );   1,745(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 14,994,662 -  14,995,698 ( - );   1,037 (bp)
Exon 2 Location 14,995,771 -  14,996,406 ( - );   636 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 Genomic Nucleotide
Accession No		 Genomic
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os04g0320700 Os04t0320700-01 114713 001203C07 16012 LOC_Os04g25440.1 AK119530 13767 AP008210.2 255675107 BAF14373.1 113564030 NC_008397.2 297603645 NM_001058994.1 115457717 NP_001052459.1 115457718
Os04g0320700 Os04t0320700-01 114713 001203C07 16012 LOC_Os04g25440.2 AK119530 13767 AP008210.2 255675107 BAF14373.1 113564030 NC_008397.2 297603645 NM_001058994.1 115457717 NP_001052459.1 115457718


Chromosome: 4 ,  position: 14,994,662 - 14,996,406 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 acacaaatga caaaacacac aaaagtatat atatacaacg cacggtgcag agctgacacg 
000061 tagatagtcg tcgttgtttt tttgccggcg gcgagatggg gtcgttgccg gcggcggcgg 
000121 aggcgcggcc gcacgccgtg atggtgccgt acccggcgca gggccacgtc acgccgatgc 
000181 tgacgctggc gaagctgcta tactcccgcg gcttccacgt caccttcgtc aacaacgagt 
000241 tcaaccaccg ccgcctcctc cgcgcccgcg gcgcccgcgc gctcgacggc gcccccggct 
000301 tccgcttcgc cgccatggac gacggcctcc cgccatccga cgccgacgcc acccaggacg 
000361 tcccggccct ctgccactcc gtccgcacca cctggcttcc caggttcatg tcgctcctcg 
000421 ccaagctcga cgacgaggcc gccgccgccg ccgccgcgga cggcgcggcg cggcgcgtca 
000481 cctgcgtcgt cgccgacagc aacatggcgt tcggcatcca cgccgcgcgg gagctcggcc 
000541 tccgctgcgc cacgctctgg acggccagcg cgtgcgggtt catgggctac taccactaca 
000601 aacacctgct cgaccgcggc ctcttccccc tcaaaagtag atcatccatg gcgaacttcc 
000661 taattcaatt ctctatccat gctaaaaaat ttgtacgtgt tttggcaggc gaggctgacc 
000721 tcagcaatgg gcacttggac acgacggtgg attggatccc gggcatgacc ggcgacctgc 
000781 ggctgcgcga cctcccgagc ttcgtgcgga gcacggaccg tgacgacatc atgttcaact 
000841 tcttcgtcca cgtgacggcg agcatgtcgc tggcggaggc ggtgatcatc aacaccttcg 
000901 acgagctcga cgcgccgtcg tcgccgctga tgggcgccat ggccgcgctg ctcccgccga 
000961 tctacaccgt cggcccgctc cacctggcgg cgcggagcaa cgtgccggcg gacagccccg 
001021 tcgccggtgt cgggtccaac ctgtggaagg agcagggcga ggcgctccgg tggctggacg 
001081 gccggccgcc gcgctccgtg gtgtacgtca acttcgggag catcacggtg atgtcggccg 
001141 agcacctggc ggagttcgcg tgggggctcg ccggcagcgg ctacgcgttc ctgtggaact 
001201 tgcgccccga cctcgtcaag ggcgacggcg gcgccgcccc cgcgctgccg ccggagttcg 
001261 cggcggcgac gagggagagg agcatgctga cgacgtggtg cccgcaggcg gaggtgctgg 
001321 agcacgaggc ggtgggggtg ttcctcaccc actccggctg gaactcgacg ctggagagca 
001381 tcgccggcgg cgtgccgatg gtgtgctggc cgttcttcgc cgagcagcag accaactgca 
001441 ggtacaagcg cacggagtgg gggatcgggg cggagatccc cgacgacgtg cggcgcggcg 
001501 aggtggaggc gctgatacgg gaggccatgg acggggagaa ggggagggag atgcggcggc 
001561 gcgtggcgga gctcagggag agcgccgtcg cggcggcgaa gcccggtggc cggtccgtgc 
001621 acaacatcga taggctcatc gacgaggtgc tcatggcttg agaaataata tgtatttttg 
001681 ctatatttgt gcattttgct taaagaatta ttacacggag gacgcacacg taacagtaac 
001741 acacc

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ486108 rbah60f12 615
more... (Total Hit Count: 25 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ519266 rwhcs13p23 785
more... (Total Hit Count: 33 )
/rice/oryzabase