cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK111969     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0659300 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 34,140,475 -  34,141,454  ( + ) ;   980(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 34,140,475 -  34,141,454 ( + ) ;   980 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os04g0659300 Os04t0659300-01 006211C11 102050 006211C11 8309 LOC_Os04g56430.1 AK111969 18449 AK111969.1 37988632 BAG99493.1 215767265 NC_008397.2 297603645 NM_001060670.2 297603499 NP_001054135.1 115461070


Chromosome: 4 ,  position: 34,140,475 - 34,141,454 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 acacacatcg atcgctaatc catcaaccta tagcttaacg atcactgcca ttgcaatggc 
000061 gcggtgcact ttgctcgttc tcctcgtggc ggcggcggtg gcggtcgtcc cgctcgccgc 
000121 cggccagccg tgggctacct gcggcgacgg cacgtacgag caggggagcg cctacgagaa 
000181 caacctcctg aacctggccc tcaccctccg cgacggcgcc tcctcccagg agatcctctt 
000241 ctccacgggc tccaacggcg ccgccccgaa caccgtctac ggcctcctcc tctgccgcgg 
000301 cgacatctcc cgcgccgcct gctacgactg cggcaccagc gtgtggaggg acgccgggag 
000361 cgcgtgccgc cgcgccaagg acgtcgccct cgtctacaac gagtgctacg cccgcctctc 
000421 cgacaaggac gacttcctcg ccgacaaggt ggggccgggg cagctgacga ccctcatgag 
000481 cagcaccaac atcagcagcg gcgccgacgt cgccgcctac gaccgcgcgg tgacgcggct 
000541 gctggcggcc accgcggagt acgcggcggg ggacatcgcg aggaagctgt tcgcgacggg 
000601 gcagcgggtg ggcgccgacc cggggttccc caacctgtac gcgacggcgc agtgcgcgtt 
000661 cgacatcacg ctggaggcgt gccgcggctg cctcgagggc ctcgtcgcca ggtggtggga 
000721 cacgttcccg gcgaacgtcg acggcgccag gatcgccggg ccgaggtgcc tcctcaggtc 
000781 ggaggtgtac ccgttctaca ccggcgcccc gatggtggtg ctgcgtgagt aggcgctggc 
000841 catgcgtgaa gctagaataa aatggcacaa attaagagtg ttccaccaga ataaatgtat 
000901 tgtatactga ataaacctgc atgcaggata tctatctaag ctgtaaccgg attatactat 
000961 tgtactatca aataaaaaaa

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BY841818 baet63b03 473
more... (Total Hit Count: 2 )
/rice/oryzabase