cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
|
General information
|
|
RAP - Accession No.
|
AK069917
Link to RAP-DB
(
IRGSP 1.0
)
|
|
RAP ID
|
Os01g0722700
(
IRGSP 1.0
)
|
|
RAP - Chromosome No.
|
1
|
|
RAP - Location, Length
|
31,861,069 -
31,864,928
( + )
;
3,860(bp)
|
|
Exon (Data source : RAP-DB)
|
|
Exon 1
|
Location |
31,861,069 -
31,861,393
( + )
;
325 (bp)
|
|
Exon 2
|
Location |
31,862,134 -
31,862,284
( + )
;
151 (bp)
|
|
Exon 3
|
Location |
31,862,378 -
31,862,560
( + )
;
183 (bp)
|
|
Exon 4
|
Location |
31,862,756 -
31,862,830
( + )
;
75 (bp)
|
|
Exon 5
|
Location |
31,862,958 -
31,863,430
( + )
;
473 (bp)
|
|
Exon 6
|
Location |
31,863,498 -
31,863,628
( + )
;
131 (bp)
|
|
Exon 7
|
Location |
31,864,113 -
31,864,194
( + )
;
82 (bp)
|
|
Exon 8
|
Location |
31,864,269 -
31,864,928
( + )
;
660 (bp)
|
Chromosome: 1
, position: 31,861,069
- 31,864,928
bp
|
|
|
Now loading
|
|
Sequence (Data source : RAP-DB)
|
Nucleotide
Fasta Format
|
000001 attgactcgt gtcgccgtct cgccgagcga acccgacgtc gtcggcgatg aggaaggcgg
000061 cggcgctggc gtccgcggcg atggccgcag cagcagtagc ggtagtctcc acggtgttgc
000121 accagaggca acgtcgggcg gcgaagcggt cagagcgcgc ggaggccgtg ctgctgcggg
000181 acctgcagga gcggtgcgcc gcgccggtgg agctgctgcg gcaggtggcg gacgcgatgg
000241 ccgcggagat gcgcgcgggg ctcgccgccg agggcgggag cgacctccag atgctcgtca
000301 cctacgttga ctccctcccc tccgggtaaa agtcccagtc cccttcccac ccccagtgct
000361 aaaccccacc tcttcgattc aattggagag cgattggtcc tcctgatcga agagagggac
000421 ttctttctgt acttaatgct tgtgctatgt cgctttctac gtcggatggc gttgatgata
000481 gtgttgtgga cagtaggcga aaatttctgg tttgcgtgaa tggattattt tgttaaggat
000541 gtttcacatg ctaatttggt ctagaagttg atgtttataa ttaagtcaat cagaggtata
000601 ttatggctgg cttccttgtc tttcgtatga aattgaaggg agtgaatggt ttgtcctgca
000661 ttactaggag gttaatgtga tttgaggtat cctggaaacg cgcatatgat gtgctgatcg
000721 aattgacttg ggagtcctga ctttaaaact aacataagct atatgaagca tgctgacaca
000781 atcgtgtggc agagctatta cacaaagata ttgtatctaa tatattgtcg tgcaatcctt
000841 ttgcgtgtac gcgaaaaaac acaaagattt tgtacaattg caagcgcacg gctgtattat
000901 tgctcttgtc taacagtaga ggttacatct gtctgtgtct gaatttcaca aaatggacat
000961 gacttattga actgtgtatc catggctatc ttacatttca atcgttgcat ggattttgca
001021 ttttcagcac acagtaatct gatatctgtt agaaaattat tgaaggggtg agaaagggat
001081 gttttatgca cttgaccttg gaggaacaaa tttccgtgtt ttacgagttc aattaggagg
001141 caaagaacgt cgaattatca agcaagactc agaagggata tccattccac aacatttaat
001201 gtccagcagt tcacatgtaa atcatgtctc actttctgca atttgttcgt tccaatcatt
001261 tttatgattc tatactaagt ctggcacatt tggtgtgatt ttgctctagg agttgtttga
001321 ttttgttgct gtggctttag caaaatttgt tgcctctgaa ggtgaagact gccatcttcc
001381 tgagggtacc caaagagaac taggttttac attctccttt ccagtgaaac aaaaatcatt
001441 ggcatctggc actcttatca agtggacgaa gagttttgca attgatgaaa tggtcagttt
001501 tgttacctca catatgtaaa ccaaatgaaa atcctaagga aggatatcca gcttcattgt
001561 gaatttaaaa aaaaaacatg tcgtcctgga tggaaattca ccaattgtga attctctttt
001621 agttctgtta tatcttatat atccaattag ttgtgtataa catacttact tgttgctttg
001681 aaggcaggtc ggcaaggatg ttgtggctga attaaacatg gctatcagaa gtcaaggact
001741 tgatatgaaa gtcacagcat tggttagctt cttttgatat ccatcttatg ctcaatagga
001801 gaaacactgc tagaagataa tgttgtggct attgtcatgt tttattgcac tggccataca
001861 aattgaagtg taaaacacta ccctttcagg ttaatgatac agtagggaca ttagctgctg
001921 ggagatatgt gaatcatgat actattgctg ctgttatact gggaacaggt agtaatgcag
001981 cgtacataga tcatgcagat gcaattccaa aatggcatgg atccctgccc aagtctggaa
002041 atatggtgtg ttttttcagt ccatacttct gtagttctgt ttgctagtta gtccgtctcc
002101 cattatccca aggtacaagg catgcaaaag atcatgctta gcagtttata ttgtttgtag
002161 tcttgcgcga ataagaaaag gcaacaataa aatataagag ggacttttgc attgttgata
002221 attttgacgt gtttatttgt tagtttcttt gctttggtaa aaggtaataa acatggaatg
002281 gggtaacttt aagtcctcac atcttccact tactgaattt gatcaagagt tggatgcaga
002341 aagtttgaac cctggcaaac aggtattacc cttatgttgt tgctcccttt tgtgggtaat
002401 gactcatgat aaggatattg ccctaccagg tttacgagaa atcgatttct ggtatgtata
002461 tgggggaact tgttcgaaga atcttactaa agatggctca agaaactcgc atttttggtg
002521 ataatatacc tccaaaactt gagagaccat acatcttaag gtatgctgtt cagtatttct
002581 gttttatttt cttttattaa tcattttcga tatttgtcca gaagctcatg aaaaggatga
002641 attgctaatg aatctgtagt tgccttccta ggctctatta caaacttcaa gtcattagaa
002701 ttctataaag tctgtcgcta tttgggtaca gaactaaatg gtaccaacaa taatagaaat
002761 agacgaatgt cttcctaagt gagaacatcc tgcaggttga tatttcctgt agtagatatg
002821 gctagactac caataaacag aagcagttta tctgagtaaa gcaagaaaaa agattctgca
002881 agttggtagt agatatagat ataaatagag ttttgaattt tttttctagg ctttatgtga
002941 ctaatttgtc atttgtcctt aattaaagca tgttctggta gctcttcaaa ttaaactgaa
003001 ccatttactt tttccgacaa ttgttgtttt acattgcatt acaggacact tgacatgctg
003061 atcatgcatc atgatacatc atctgatctc agaacagttg ccaacaagtt gaaagaagtc
003121 ttgggggtat ttttcatctt tctatcttca ctaatactgt catttgttca atccctacaa
003181 tgatcatagt tggttttcag atcgaatata cctctttcac gacgaggaaa ctggttttgg
003241 atgtttgtga ggccattgcg acacgcggtg cacggcttgc tgctgctggg atatatggca
003301 ttatccaaaa gcttggtcag cattctgaca gccccagtac gagaaggtcc gtgattgctg
003361 tggatggagg ggtctataaa tactacactt tcttcagcca gtgcatggag agcactctga
003421 gtgacatgct tgggcaggag ctggccccct ctgttatgat caagcatgtc aatgatggct
003481 caggcgttgg ggcagctctc ctggcagcct cttattctca ataccaccag gctgaatctg
003541 cagatagttc ataatattct aaaaaaaaga agctgaatct gcagatagct cttaatattc
003601 tgaaaaaact gtcaaaaaat aatattctga aaaaaaactg tgtattaagg tgataaacaa
003661 taggttttgg agcaattttt tttttaagat aatggattaa accggcctct acatccaaac
003721 gagattctag agcaatagca gctatacagt ttgcctaagg gctaaatatc ttgtattttg
003781 caaatgtcaa ttgtacatga actctatctg caatatctgt tcagtgtttc agtgggtcat
003841 agacactgtg gttatatatc
|
Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
