cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK105966     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0320700 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 14,994,667 -  14,996,402  ( - );   1,736(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 14,994,667 -  14,995,698 ( - );   1,032 (bp)
Exon 2 Location 14,995,771 -  14,996,402 ( - );   632 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 RNA Nucleotide
Accession No		 RNA
Nucleotide GI		 Genomic Protein
Accession No		 Genomic
Protein GI		 RefSeq Genomic
Nucleotide
Accession No		 RefSeq Genomic
Nucleotide GI		 RefSeq RNA
Nucleotide
Accession No		 RefSeq RNA
Nucleotide GI		 RefSeq Genomic Protein
Accession No		 RefSeq Genomic
Protein GI
Os04g0320700 Os04t0320700-01 108815 001205E07 16012 LOC_Os04g25440.1 AK105966 24550 AK105966.1 32991175 BAG97471.1 215740976 NC_008397.2 297603645 NM_001058994.1 115457717 NP_001052459.1 115457718
Os04g0320700 Os04t0320700-01 108815 001205E07 16012 LOC_Os04g25440.2 AK105966 24550 AK105966.1 32991175 BAG97471.1 215740976 NC_008397.2 297603645 NM_001058994.1 115457717 NP_001052459.1 115457718


Chromosome: 4 ,  position: 14,994,667 - 14,996,402 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 aaatgacaaa acacacaaaa gtatatatat acaacgcacg gtgcagagct gacacgtaga 
000061 tagtcgtcgt tgtttttttg ccggcggcga gatggggtcg ttgccggcgg cggcggaggc 
000121 gcggccgcac gccgtgatgg tgccgtaccc ggcgcagggc cacgtcacgc cgatgctgac 
000181 gctggcgaag ctgctatact cccgcggctt ccacgtcacc ttcgtcaaca acgagttcaa 
000241 ccaccgccgc ctcctccgcg cccgcggcgc ccgcgcgctc gacggcgccc ccggcttccg 
000301 cttcgccgcc atggacgacg gcctcccgcc atccgacgcc gacgccaccc aggacgtccc 
000361 ggccctctgc cactccgtcc gcaccacctg gcttcccagg ttcatgtcgc tcctcgccaa 
000421 gctcgacgac gaggccgccg ccgccgccgc cgcggacggc gcggcgcggc gcgtcacctg 
000481 cgtcgtcgcc gacagcaaca tggcgttcgg catccacgcc gcgcgggagc tcggcctccg 
000541 ctgcgccacg ctctggacgg ccagcgcgtg cgggttcatg ggctactacc actacaaaca 
000601 cctgctcgac cgcggcctct tccccctcaa aagtagatca tccatggcga acttcctaat 
000661 tcaattctct atccatgcta aaaaatttgt acgtgttttg gcaggcgagg ctgacctcag 
000721 caatgggcac ttggacacga cggtggattg gatcccgggc atgaccggcg acctgcggct 
000781 gcgcgacctc ccgagcttcg tgcggagcac ggaccgtgac gacatcatgt tcaacttctt 
000841 cgtccacgtg acggcgagca tgtcgctggc ggaggcggtg atcatcaaca ccttcgacga 
000901 gctcgacgcg ccgtcgtcgc cgctgatggg cgccatggcc gcgctgctcc cgccgatcta 
000961 caccgtcggc ccgctccacc tggcggcgcg gagcaacgtg ccggcggaca gccccgtcgc 
001021 cggtgtcggg tccaacctgt ggaaggagca gggcgaggcg ctccggtggc tggacggccg 
001081 gccgccgcgc tccgtggtgt acgtcaactt cgggagcatc acggtgatgt cggccgagca 
001141 cctggcggag ttcgcgtggg ggctcgccgg cagcggctac gcgttcctgt ggaacttgcg 
001201 ccccgacctc gtcaagggcg acggcggcgc cgcccccgcg ctgccgccgg agttcgcggc 
001261 ggcgacgagg gagaggagca tgctgacgac gtggtgcccg caggcggagg tgctggagca 
001321 cgaggcggtg ggggtgttcc tcacccactc cggctggaac tcgacgctgg agagcatcgc 
001381 cggcggcgtg ccgatggtgt gctggccgtt cttcgccgag cagcagacca actgcaggta 
001441 caagcgcacg gagtggggga tcggggcgga gatccccgac gacgtgcggc gcggcgaggt 
001501 ggaggcgctg atacgggagg ccatggacgg ggagaagggg agggagatgc ggcggcgcgt 
001561 ggcggagctc agggagagcg ccgtcgcggc ggcgaagccc ggtggccggt ccgtgcacaa 
001621 catcgatagg ctcatcgacg aggtgctcat ggcttgagaa ataatatgta tttttgctat 
001681 atttgtgcat tttgcttaaa gaattattac acggaggacg cacacgtaac agtaac

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ486108 rbah60f12 615
more... (Total Hit Count: 25 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ519266 rwhcs13p23 785
more... (Total Hit Count: 33 )
/rice/oryzabase