cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA
General information
RAP - Accession No. AK069681     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os01g0206700 ( IRGSP 1.0 )
RAP - Chromosome No. 1
RAP - Location, Length 5,808,595 -  5,809,655  ( - );   1,061(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 5,808,595 -  5,809,655 ( - );   1,061 (bp)

Related Rice IDs
RAP Locus RAP ID RAP Annotated
Accession No		 KOME
Clone ID		 KOME
Clone Name		 KOME
Cluster ID		 MSU ID cDNA
Accession No		 RiceXPro
FeatureNum		 UniProt
Accession No		 UniProt Entry
Name
Os01g0206700 Os01t0206700-02 J023034N02 205415 J023034N02 912 LOC_Os01g10890.1 AK069681 17220 Q9LWM4 CIPK5_ORYSJ


Chromosome: 1 ,  position: 5,808,595 - 5,809,655 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format 
000001 tatgttgcac cagagataat caataagagg ggctatgatg gagcaaaagc agacatatgg 
000061 tcttgcggtg tcatactctt tgttctgctt gctggctacc tcccattcca tgactcaaat 
000121 ctaatggaga tgtaccggaa gataagcaaa ggtgatgtca agttcccaca gtggttcact 
000181 actgatgtcc gaaggcttct gtccaggctg cttgatccaa atccaaacat taggatcacc 
000241 gttgagaagc tagttgagca tccatggttc aagaaggggt acaaaccagc agtgatgcta 
000301 tcacagccaa atgaatcaaa caacctcaag gatgtccata ctgctttcag tgctgatcac 
000361 aaggacaatg aaggcaaggc aaaagaacca gcaagctctt tgaagccagt gagcttgaat 
000421 gcatttgaca tcatctccct ctccaaagga tttgatctgt caggcctgtt tgagaacgac 
000481 aaagagcaga aggcagactc acggttcatg acacaaaaac cagcatcagc aatagtgtca 
000541 aagctagagc agattgctga gacagagagc ttcaaggtga agaagcagga tggactggtg 
000601 aagctccagg gatccaaaga agggaggaaa gggcagctcg cgatcgatgc agagatcttt 
000661 gaagtgacac catccttctt tgttgttgag gtgaagaagt ctgcagggga cacgttggag 
000721 tacgaaaaat tctgcaacaa gggcctaaga ccttctctca gggacatctg ctgggatggt 
000781 cagtcagagc atccatcact ggcacagtca tcaactctga ctcagtcctc taagtcaatc 
000841 tcgagacatg ccatttaagt gcaacctcat aagagatgca gtaacaatcc attttcctct 
000901 ctccttttcc ctttcatcaa agtgctgagc ctgagagtat tctcacttga gcatcaggct 
000961 tagggctctt tgatgataat ttttgccagt tttccttgta tagtagcagt ttgtctacat 
001021 ggatctcctg ttctttcacc aatagaaaca gggagattga c

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ475981 rbaal30o15 693
more... (Total Hit Count: 8 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ562777 rwhkv1i17 838
more... (Total Hit Count: 7 )
/rice/oryzabase