cDNA ( Data source : RAP-DB )

cDNA Detail

jump to Other species ESTs data to homologous Rice cDNA

General information
RAP - Accession No. AK105783     Link to RAP-DB ( IRGSP 1.0 )
RAP ID Os04g0320700 ( IRGSP 1.0 )
RAP - Chromosome No. 4
RAP - Location, Length 14,994,637 -  14,996,347  ( - );   1,711(bp)

Exon (Data source : RAP-DB)
Exon 1 Location 14,994,637 -  14,995,698 ( - );   1,062 (bp)
Exon 2 Location 14,995,771 -  14,996,347 ( - );   577 (bp)

Related Rice IDs
RAP Locus RAP ID KOME
Clone ID
KOME
Clone Name
KOME
Cluster ID
MSU ID cDNA
Accession No
RiceXPro
FeatureNum
Os04g0320700 Os04t0320700-02 108632 001202G07 16012 LOC_Os04g25440.1 AK105783 37666
Os04g0320700 Os04t0320700-02 108632 001202G07 16012 LOC_Os04g25440.2 AK105783 37666


Chromosome: 4 ,  position: 14,994,637 - 14,996,347 bp

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Sequence (Data source : RAP-DB)
Nucleotide
Fasta Format
000001 gtagatagtc gtcgttgttt ttttgccggc ggcgagatgg ggtcgttgcc ggcggcggcg 
000061 gaggcgcggc cgcacgccgt gatggtgccg tacccggcgc agggccacgt cacgccgatg 
000121 ctgacgctgg cgaagctgct atactcccgc ggcttccacg tcaccttcgt caacaacgag 
000181 ttcaaccacc gccgcctcct ccgcgcccgc ggcgcccgcg cgctcgacgg cgcccccggc 
000241 ttccgcttcg ccgccatgga cgacggcctc ccgccatccg acgccgacgc cacccaggac 
000301 gtcccggccc tctgccactc cgtccgcacc acctggcttc ccaggttcat gtcgctcctc 
000361 gccaagctcg acgacgaggc cgccgccgcc gccgccgcgg acggcgcggc gcggcgcgtc 
000421 acctgcgtcg tcgccgacag caacatggcg ttcggcatcc acgccgcgcg ggagctcggc 
000481 ctccgctgcg ccacgctctg gacggccagc gcgtgcgggt tcatgggcta ctaccactac 
000541 aaacacctgc tcgaccgcgg cctcttcccc ctcaaaagta gatcatccat ggcgaacttc 
000601 ctaattcaat tctctatcca tgctaaaaaa tttgtacgtg ttttggcagg cgaggctgac 
000661 ctcagcaatg ggcacttgga cacgacggtg gattggatcc cgggcatgac cggcgacctg 
000721 cggctgcgcg acctcccgag cttcgtgcgg agcacggacc gtgacgacat catgttcaac 
000781 ttcttcgtcc acgtgacggc gagcatgtcg ctggcggagg cggtgatcat caacaccttc 
000841 gacgagctcg acgcgccgtc gtcgccgctg atgggcgcca tggccgcgct gctcccgccg 
000901 atctacaccg tcggcccgct ccacctggcg gcgcggagca acgtgccggc ggacagcccc 
000961 gtcgccggtg tcgggtccaa cctgtggaag gagcagggcg aggcgctccg gtggctggac 
001021 ggccggccgc cgcgctccgt ggtgtacgtc aacttcggga gcatcacggt gatgtcggcc 
001081 gagcacctgg cggagttcgc gtgggggctc gccggcagcg gctacgcgtt cctgtggaac 
001141 ttgcgccccg acctcgtcaa gggcgacggc ggcgccgccc ccgcgctgcc gccggagttc 
001201 gcggcggcga cgagggagag gagcatgctg acgacgtggt gcccgcaggc ggaggtgctg 
001261 gagcacgagg cggtgggggt gttcctcacc cactccggct ggaactcgac gctggagagc 
001321 atcgccggcg gcgtgccgat ggtgtgctgg ccgttcttcg ccgagcagca gaccaactgc 
001381 aggtacaagc gcacggagtg ggggatcggg gcggagatcc ccgacgacgt gcggcgcggc 
001441 gaggtggagg cgctgatacg ggaggccatg gacggggaga aggggaggga gatgcggcgg 
001501 cgcgtggcgg agctcaggga gagcgccgtc gcggcggcga agcccggtgg ccggtccgtg 
001561 cacaacatcg ataggctcat cgacgaggtg ctcatggctt gagaaataat atgtattttt 
001621 gctatatttg tgcattttgc ttaaagaatt attacacgga ggacgcacac gtaacagtaa 
001681 cacaccagaa taagtcggaa ggttctatgt t

Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.

Hit Barley ESTs
Acc. No. Clone Name Length
BJ486108 rbah60f12 615
more... (Total Hit Count: 25 )
Hit Wheat ESTs
Acc. No. Clone Name Length
CJ519266 rwhcs13p23 785
more... (Total Hit Count: 33 )
/rice/oryzabase