cDNA ( Data source : RAP-DB )
cDNA Detail
jump to Other species ESTs data to homologous Rice cDNA
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General information
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RAP - Accession No.
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AK105415
Link to RAP-DB
(
IRGSP 1.0
)
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RAP ID
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Os04g0440100
(
IRGSP 1.0
)
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RAP - Chromosome No.
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4
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RAP - Location, Length
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22,119,913 -
22,127,587
( - );
7,675(bp)
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Exon (Data source : RAP-DB)
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Exon 1
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Location |
22,119,913 -
22,120,702
( - );
790 (bp)
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Exon 2
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Location |
22,120,827 -
22,120,880
( - );
54 (bp)
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Exon 3
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Location |
22,120,994 -
22,121,112
( - );
119 (bp)
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Exon 4
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Location |
22,121,216 -
22,121,281
( - );
66 (bp)
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Exon 5
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Location |
22,121,893 -
22,122,361
( - );
469 (bp)
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Exon 6
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Location |
22,122,441 -
22,122,538
( - );
98 (bp)
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Exon 7
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Location |
22,123,330 -
22,123,414
( - );
85 (bp)
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Exon 8
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Location |
22,124,228 -
22,124,332
( - );
105 (bp)
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Exon 9
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Location |
22,124,421 -
22,124,500
( - );
80 (bp)
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Exon 10
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Location |
22,124,596 -
22,124,694
( - );
99 (bp)
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Exon 11
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Location |
22,124,802 -
22,124,897
( - );
96 (bp)
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Exon 12
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Location |
22,126,048 -
22,126,154
( - );
107 (bp)
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Exon 13
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Location |
22,127,115 -
22,127,587
( - );
473 (bp)
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Chromosome: 4
, position: 22,119,913
- 22,127,587
bp
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Now loading
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Sequence (Data source : RAP-DB)
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Nucleotide
Fasta Format
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000001 acctcgctct ctcctctctt cctcttcccc caatctccga cagttgccaa atttcccttc
000061 ccacccccaa acccaaaccc cagcgacgac ggcgacgacg cgcagcagac gaaagcgagc
000121 gagaggcgag agaaatccca tcgtttccca aaccctaacc ccctcctcct cctcctccag
000181 atctcggcgg ccgcgcggct gatgcgaggt gagccccgtc cgccctaggg tttgcggcgg
000241 ggtgcgtggt ggtggtggtt gggccggggg ggacggggcc ctcctgctcg cgggggtggg
000301 ggttgggtgg ggatggcggc ggcgcgcgcg cacgtgaagg acccggcgca ccggaccaag
000361 gtggtgctcc ggaggctgcc gccggcgatc gcgcagcagg ccgtcgtgga acaggtcgac
000421 gcgcgcttcg gcggccggta cgactggtcg tgcttccgcc ccggcaatgc caggtaacgc
000481 gcgattcctc tcgccttgct ccctccgtgt gcgtcgtgcg ggtgcgtgcg tgcgtgcgtg
000541 cgtgtggttg gggggcgtcg ggggcacgtt tggtctgtag ctagggattg ggttcgaagc
000601 tgtttattag cctgcgaatt gtgtacgggg aggtaccacc ccatgaaatt tcgttagtag
000661 atttcattgg ctggttttga ttgagtagct gtggccagca attagcattc tataatcgtg
000721 caatttacag atacaagttt ggactgtttg cctctatcta gtgcatttgg ttatgtctag
000781 caacaaatag gttgctgtga tcaagtagtt actgagtttt aagtttgcaa tcctaactga
000841 ttgtgggcca tttacagttc tttcgcgttg ttgtgatctc gaagcatagt ggattgtgta
000901 cttcaaattg tagctaggat attttggagg tgtattttag tttattctta ttagatttaa
000961 tattagctgt gaccaaatta ttgcttggag atagtgccca ccttcttagt tttgttgcat
001021 aattttagct gtaagtgaac taaatgtgct tttgattgca gctagtataa gtgaggtcaa
001081 tatgtttttt ttttataaaa aaaattacct taccttgcca ttttggctgc tggagtaaga
001141 ggttttgttc tgtttgttca tttttatgct tctgtaggat tgccttaaga catgctagtt
001201 atagagaaaa tttcctataa gaaaacatgc acactgcaaa actacttggc agcattgagc
001261 cttttttagt ttgtgctgag tgatgtgcaa cgtactgtgg ccattcgtat gtagctagtg
001321 attcaattgt tatgtctgca attcttaact cattgccgtg gaagctaaat gatagtggca
001381 ttctccactt catttttatt ctcatttttc tgacaatgtt attgcttgtc cagccaaaag
001441 aatcacagat attctcgact ctaccttaac ttcaagggcc cagaagatgt cgttgaattt
001501 gctgaggtct tcaatggtca tgtgtttgtg aatgaaaagg gtaactttca catttatgta
001561 ccaacgtttc tttttgccat gcaaatttat attcaggatt cagaacttat attctgatta
001621 tgtcaatgtt gtcactatca aaactagata cacatgtagc aatataagca gtgtggatct
001681 ttgtacaaac taatagtgca acatagagaa tcagaatgaa attgcaatta ttgagcattt
001741 acatagtctt tgaattggag attgatcttg tcgaatagga ttttgggact aaacagtagg
001801 ttttgcatat ttttccctat tcaacttatt gatgtctagt attatttttc cctttttgat
001861 tagtgcgcag caaagaaaat attcaactgt aactatataa attccaatat tatggaaata
001921 gtttaaattg agaaggccca acattgttgt taccattttt ggtgttatta gagatataga
001981 ggtctcactg tggctgttat agcgtcaatt ttctaggtac ttgattttgc tataagtttc
002041 cttttatatg ttgtccaatt attccattcc taagcacaga gtttccttta tatctaagct
002101 tgggggcaac tgtggtgtat tctggtcttt tctcctttac tagtacagtt gaatatgcat
002161 tcaagctacc taagtatttg ccaacatact tgtctaatgt tgtgtaatgc tgtgacaata
002221 aagtactatg ataatactat acttctgtta ggttctccaa atatatcaca gtagaaattg
002281 ataacctaac ttgcattttg gaggctggag accatcctac aaacaccacc ttttgttact
002341 atttattggt tactgatgta tgttattgct attctttctt atacacttca tagcatttta
002401 acattttcag atgcctattt tcagcatgct ggtataattg acattcatgt taagttattt
002461 tcttattttt ggtattcaag ttaaaaaaga ggttgacttt tgatggttgc aagcaagcac
002521 tgcttataat gtgatatatt ttaggtcgga acataagtta atacttttaa tgtaatcaag
002581 gtgttgagtt ttccttcaac agtcgagcac atgcttgtaa atttaatttt ggactatgct
002641 tttttgtttt aaattttatt gtcatgcatg cggcctatgg ttcctgtcag gtgctcaatt
002701 taaagctctt gtggaatatg caccatcgca acaggtccnc aagtcaaaca cgaagaaaga
002761 tgctcgtcaa ggaactataa tgaaaggtcc tagacaatca tttaatctca ttctccatcc
002821 tgtaggtgac acaatttcat atttatcatt acttcaaact tagctggcat cttttttggg
002881 atttaatatc cagatccgga atacttggag tttcttgaat cgatttcaaa gcctgctgag
002941 catctgccaa gtgctgaaat tcagctcgaa aggaaagaag ctgaaagggc aggtaaagta
003001 ttgtttgtaa tatcagatta taattatgcc tttcaaagat gccaagcata aaagaagggt
003061 ctattatcaa cttgatcact attgcagctg ctggaaagga accacctgtt gtgacgcctc
003121 ttatggtcta tgttcgccag caaagggcag ctaagagtat ggctcaggta tacgtgttca
003181 ttaaactgta gtattggttt atattatatt ttatcaactt gagggtcggc taactagtac
003241 ttccacatgt tacagagatc tggaagtagt agactcagta gaaaagttgc gggtgttgtt
003301 actagcagtc ctagtccttc taaaaggggt tctgagaagc gcaggacctc tgcttcgacg
003361 gtaaatttct tgcttgaaaa aaatagtaca attttaaatg gccacaagag gtggggcttc
003421 attttttcat gcatatattt tcatagtctg gtcttggatt tcatgaaatg aacatatcct
003481 atgtcatgtt ttcttcacga aatactacta ttttaaatgg tcacaagagg cgggacccat
003541 ctattttatt tcccgatagg ttctttttat ttcttttaat atttattgcc ctttctcgcc
003601 atggtgttcg ccctaatttc agtttgtttg tactatcgac ctatgtcatg ttttctttgt
003661 tcaaaacaaa atcctgtccc cagtgtgcat ttctgtttgt gctactgttt gtgtattgta
003721 tgctcttata tgttttatac tccctctgtt tcatcttata agtcgttttg acttttttcc
003781 tagtcaaact ttgttaagtt tgaccaagtt tatagaaaaa tttaacatct aaaatatcaa
003841 attagattca ttaaatctag cattgaatat attttgataa tatgtttgtt ttgtgttaaa
003901 aatatcatta tatttttcta aagaagtttg actaaggaaa aagttaaaca acttataata
003961 tgaaatgcag ggagtatatt ttatttctgg gctattgttg tgagttttca tctattcttt
004021 ttcaaccttt gaacagtgca ctgtgtctca gtttggttat tttgggtttc atgctgcatt
004081 gttataaaaa gtacccagtt cattccgcac aaaaactatg ccatgaggtt atgacaagct
004141 actgtttttg tctttttttc atgtgatctt cagcaatatg ttctacgaga gaatgctaag
004201 gagaagccaa cttatatctt agtgccaaag agagacgagc atgcgcagag ggaaaaaggt
004261 actgctggaa cttcaggtgg tactgattca agaaatagat aatcactata actttgttgt
004321 aaccattcat atcaacatgt ccttttattt tattgattat tactaagtat ctgttctctg
004381 ctataacata tccatgccta tatatgctga taaaaggttg tatcaactaa tgtatagttt
004441 gagctgagtt aggtaatagg gtgatgacac tgattgattc aattctgtga gaactgaggc
004501 aagatcaagt tgatcttatt atgctgtgtt gcatggtgaa atctagctat atgaaacctg
004561 tacaatttaa gtaaataggt taaatcttag ttgtttttat gactattcca aaacaaaaac
004621 taaaaccact gcaatgctaa aagcaccatc aacatagaca agtttagttt gggcttgttt
004681 acttatttgg cataatagct attgtgttga gataggcctg tggacatttg tatggctacc
004741 tgccatccaa ttatggcaat ggcgtacctt gttgggtgac atctactttt gctacactac
004801 gtcaatgtcc tatcctatag aaaatggatt tcattttgaa cttccatcat tttgtctttg
004861 catggagttc tattagtcag ttacctttcc aagaagtgta tagtattatt cttgtcgtct
004921 tctgttagcc tctatccttc caatttgtaa attgttgatg tatgctattt ttgcactttc
004981 tgcccatatg tcttgatgaa agttcctttt tagttgttaa tattgctgtt tcgttcaatt
005041 gtctcgtaga tgctacaagt ggcgggattt ctggttctgc tcatgtcgcg gaaaacaaaa
005101 aagagaaaat tgtgcttttg aaaggaagag caagggtcga ttctaatgta agtatataag
005161 ctccacgaat agtttgacca ttttgttggt aactgtactg actgtcattt gatatgtttt
005221 ttccagacat ctgatgtcac atctcagcag cagtcaggga cccctatgaa aaatgctgca
005281 caatctagtt ctaggcaaga tccgcggctt gagggcagtg gcagaattat taagactata
005341 ctttcaaaca aggaaggacg gcatgtggtt acgtctcaac atgatcagga aggtcacata
005401 attacagctg agaagcgccc accacggatt ccaaacccac gttccgttgt taaagatcag
005461 gtagttgaaa atgctgagaa aaaccatttg gatgacaaac atagtcatct ccatggttct
005521 gggctcatca gtgaaaagac tgaaagacat gctagaaata gagataggcc tgatcgtggt
005581 gtatgggccc ctcgtcgcta tgacaaatct gcatcaggtg ggacgcattc ctcgtcatct
005641 gagttctcac caatgcagca acattctggt gaaaatttct gtcagcaagc agatggtaag
005701 attccttttg aagcgatttt agtactgttc atttgagttc ttgagttatt gtattattga
005761 gggtgaatag ccaattcagt ccttaaactt ttgctcatgg gtcaaattag tccttgatgt
005821 tttacgttgt ccaaacaaat ccctaaagat tatcatgtgg cttaaaacgc cacatggaca
005881 tgccacatca ttcatgcatg tacagtcaac aattaaatat ccattttacc cttacatttt
005941 ctatagaaaa aagaaaaaaa aaaggaaaac atgaagaaag caatcttaaa acaaaagaaa
006001 aatgacacat tctttagtta ccaatgcaac atctttttct taattctttt tatttatttc
006061 ctatggagaa tgtataaggg tagaatggac attttaaatg ttgaatttgc atgcacatgt
006121 gatgtggcat gtacacgtgg catttttatg ggtccaagga ttatattaaa tcacactata
006181 aagtttgggg acttattttg gccaatatga aatgtcaagg actaaattga tccttaagtg
006241 aaagttcaag gatcatgttg gttattcacc ctattattaa ttatgtgact tgatgatgca
006301 aagcaggcca tggagagaga aaaatagacc caaggggtca tggtggtatt cgcggaggcc
006361 ctgtggaaaa tggtttgtat atttagttgt tgcaattatg accatgaaaa atgatgcaaa
006421 ctgttctcca gatcattttc tgtactatgg ttaatactgt caatcttcaa ttcaggacat
006481 agacatgcta accgccgtgg tcctccacgt ggtctgaagg agatggaaat ttctgcaagc
006541 acatctgatg gaaagccttc aaagagagcc tctgccaact atggtgctca tgaggtgtga
006601 tcagaatata gttttttatt ctgcctttga catttcaagg gcctatgttt tgcgtgaaat
006661 gatttttatt cactagattt cttataatat atgaatgtta tatgtagagg caagtgtggg
006721 ttcaaaaatc aagctcggcg acgtgatctt gtccaatgat ggtaaactat ttgtggtcca
006781 gaaattttgt tttggtcttt ggttatcaaa acacatgcac cacaagaaaa agaattacta
006841 gaagtgtgtc accaaataca cgctaattta tttgctcttt tgcagatact catcaaaaca
006901 aatattgcaa gttgtggagt tctggatttt gcagcttgat cctgtgaagt actgttaaca
006961 aaatgccccc gatcatatgc ttccatgaag tgcaatctca gatttgtcaa tcgaaatctc
007021 agctttagct gaaaagggag cttatatgat ttgattcaca gcaatagtga attaacataa
007081 cccactttag gtagctcttg attgctttgg gtgagacttg atttgggccc aaggttgcta
007141 ttctggagca atggaaggat ttaggttggc atcattaccc tcgtgacagt ggtcacatat
007201 ttctgagacc cctggagaat atacacgacc tcaactaatc agagatgggt gtacatatct
007261 ctagagaaag aagaggtctg gttctgactt ctgttcgcag gttagcggtg ccatgtatct
007321 acaaaagaga taaaaaaaag ttatcagact gcctggtttg ctaaataaaa gtgaattagt
007381 tgatagatta tgagaatcca ctgtttaggc ggctgcgacc gtggtcacca acagaagtta
007441 ccctagagtg caaagtggca tctcattttg gttttgtgcc cctgcccccc ctgagtaacg
007501 ggatgtggta ttgttttgac atgtggatgt tgatggtgtg cgtcttcctg ttaatgtttc
007561 accagataat tatgggggta ttgttaagaa tgatgatatg atgtacagca tcaaaggtgc
007621 ttgctgtttt aatcttgagc aagttgtcgt gcttctatga aatgtgattg ttaac
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Notice:The following homologous wheat ESTs and barley ESTs are BLAST results with E-values less than e-20.
Update info.
